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#  Thermovibrio ammonificans HB1 genome manual curation
#  C-DEBI
#  PI: Donato Giovannelli (Rutgers University)
#  Version date: 13-April-2020
=========================
Organism  Chromosome  Contig      Gene          Strand  Start      Stop       Called_By  Product                                                                                                                Product_From  Color  Accession         Organism_Name                            Positivities  Identities  NR                                                                                                                                                                                                                                                                        SPTR                                                                                                                                                                                    PFAM                                                                                                                                                                                                                                                 TIGRFAM                                                                                                                         KEGG                                                                                                                                                                 COGs                                                                                                                                                                                            
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tam15698  08/20/2010  Contig31    Theam_0001    f       45         1523       prodigal   anthranilate synthase component I                                                                                      TIGR          10     nd                nd                                       nd            nd          NR top hit: anthranilate synthase component I [Hydrogenivirga sp. 128-5-R1-1] gb|EDP75820.1| anthranilate synthase component I [Hydrogenivirga sp. 128-5-R1-1]                                                                                                            SPTR: Anthranilate synthase component I;                                                                                                                                                PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein                                                                                                                                                                      TIGRFAM: anthranilate synthase component I                                                                                      KEGG: aae:aq_582 anthranilate synthase component I                                                                                                                   COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0002    f       1554       3008       prodigal   replicative DNA helicase                                                                                               TIGR          2      nd                nd                                       nd            nd          NR top hit: replicative DNA helicase [Hydrogenivirga sp. 128-5-R1-1] gb|EDP74241.1| replicative DNA helicase [Hydrogenivirga sp. 128-5-R1-1]                                                                                                                              SPTR: Replicative DNA helicase;                                                                                                                                                         PFAM: DnaB domain protein helicase  domain protein                                                                                                                                                                                                   TIGRFAM: replicative DNA helicase                                                                                               KEGG: pmx:PERMA_1295 replicative DNA helicase                                                                                                                        COGs: COG0305 Replicative DNA helicase                                                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0003    r       3817       3005       prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein Hoch_5053 [Haliangium ochraceum DSM 14365] gb|ACY17541.1| hypothetical protein Hoch_5053 [Haliangium ochraceum DSM 14365]                                                                                                                SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: hoh:Hoch_5053 hypothetical protein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0004    r       5546       3840       prodigal   prolyl-tRNA synthetase                                                                                                 TIGR          7      nd                nd                                       nd            nd          NR top hit: proline--tRNA ligase [delta proteobacterium NaphS2] gb|EFK05300.1| proline--tRNA ligase [delta proteobacterium NaphS2]                                                                                                                                        SPTR: Prolyl-tRNA synthetase;                                                                                                                                                           PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein                                                                                                                        TIGRFAM: prolyl-tRNA synthetase                                                                                                 KEGG: sat:SYN_00905 prolyl-tRNA synthetase                                                                                                                           COGs: COG0442 Prolyl-tRNA synthetase                                                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0005    f       5589       6659       prodigal   glycosyl transferase group 1                                                                                           PFAM          9      nd                nd                                       nd            nd          NR top hit: glycosyl transferase group 1 [Desulfonatronospira thiodismutans ASO3-1] gb|EFI34333.1| glycosyl transferase group 1 [Desulfonatronospira thiodismutans ASO3-1]                                                                                                SPTR: Glycosyl transferase group 1;                                                                                                                                                     PFAM: glycosyl transferase group 1                                                                                                                                                                                                                   TIGRFAM:                                                                                                                        KEGG: mca:MCA2126 glycosyl transferase; group 1 family protein                                                                                                       COGs: COG0438 Glycosyltransferase                                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0006    f       6652       8067       prodigal   chromosomal replication initiator protein DnaA                                                                         TIGR          2      nd                nd                                       nd            nd          NR top hit: chromosomal replication initiation protein [Clostridium novyi NT] sp|A0Q3U6.1|DNAA_CLONN RecName: Full=Chromosomal replication initiator protein dnaA gb|ABK62135.1| chromosomal replication initiator protein DnaA [Clostridium novyi NT]                    SPTR: Chromosomal replication initiator protein dnaA;                                                                                                                                   PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA  domain                                                                                                                                                         TIGRFAM: chromosomal replication initiator protein DnaA                                                                         KEGG: cno:NT01CX_0867 chromosomal replication initiation protein                                                                                                     COGs: COG0593 ATPase involved in DNA replication initiation                                                                                                                                     
tam15698  08/20/2010  Contig31    Theam_0007    f       8315       9409       prodigal   DNA polymerase III; beta subunit                                                                                       TIGR          2      nd                nd                                       nd            nd          NR top hit: DNA polymerase III; beta subunit [Persephonella marina EX-H1] gb|ACO03288.1| DNA polymerase III; beta subunit [Persephonella marina EX-H1]                                                                                                                    SPTR: DNA polymerase III; beta subunit;                                                                                                                                                 PFAM: DNA polymerase III beta chain                                                                                                                                                                                                                  TIGRFAM: DNA polymerase III; beta subunit                                                                                       KEGG: pmx:PERMA_1539 DNA polymerase III; beta subunit                                                                                                                COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog)                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0008    f       9409       9930       prodigal   CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase                                                      TIGR          5      nd                nd                                       nd            nd          NR top hit: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase) [NC10 bacterium 'Dutch sediment']                                                                                                   SPTR: CDP-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase;                                                                                                                PFAM: CDP-alcohol phosphatidyltransferase                                                                                                                                                                                                            TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase                                                      KEGG: hoh:Hoch_4511 CDP-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase                                                                                COGs: COG0558 Phosphatidylglycerophosphate synthase                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0009    f       9927       10505      prodigal   protein of unknown function DUF205                                                                                     PFAM          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein HM1_1986 [Heliobacterium modesticaldum Ice1] gb|ABZ84544.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]                                                                                                           SPTR: Glycerol-3-phosphate acyltransferase;                                                                                                                                             PFAM: protein of unknown function DUF205                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: hmo:HM1_1986 membrane protein                                                                                                                                  COGs: COG0344 membrane protein                                                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0010    f       10515      11399      prodigal   Polyprenyl synthetase                                                                                                  PFAM          12     nd                nd                                       nd            nd          NR top hit: Polyprenyl synthetase [Geobacter bemidjiensis Bem] gb|ACH38276.1| Polyprenyl synthetase [Geobacter bemidjiensis Bem]                                                                                                                                          SPTR: Polyprenyl synthetase;                                                                                                                                                            PFAM: Polyprenyl synthetase                                                                                                                                                                                                                          TIGRFAM:                                                                                                                        KEGG: gbm:Gbem_1257 Polyprenyl synthetase                                                                                                                            COGs: COG0142 Geranylgeranyl pyrophosphate synthase                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0011    f       11485      13338      prodigal   deoxyxylulose-5-phosphate synthase                                                                                     TIGR          12     nd                nd                                       nd            nd          NR top hit: 1-deoxy-D-xylulose-5-phosphate synthase [Aquifex aeolicus VF5] sp|O67036.1|DXS_AQUAE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gb|AAC-TRUNCATED-              SPTR: 1-deoxy-D-xylulose-5-phosphate synthase;                                                                                                                                          PFAM: Transketolase central region; Transketolase domain-containing protein                                                                                                                                                                          TIGRFAM: deoxyxylulose-5-phosphate synthase                                                                                     KEGG: aae:aq_881 1-deoxy-D-xylulose-5-phosphate synthase                                                                                                             COGs: COG1154 Deoxyxylulose-5-phosphate synthase                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0012    f       13420      14439      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: putative lipoprotein [Teredinibacter turnerae T7901] gb|ACR12905.1| putative lipoprotein [Teredinibacter turnerae T7901]                                                                                                                                      SPTR: Putative lipoprotein;                                                                                                                                                             PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: ttu:TERTU_2803 putative lipoprotein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0013    f       14651      15214      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein Acfer_0589 [Acidaminococcus fermentans DSM 20731] gb|ADB46984.1| hypothetical protein Acfer_0589 [Acidaminococcus fermentans DSM 20731]                                                                                                  SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: afn:Acfer_0589 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0014    f       15221      15997      prodigal   Domain of unknown function DUF1828                                                                                     PFAM          11     nd                nd                                       nd            nd          NR top hit: Domain of unknown function DUF1828 [Acidaminococcus fermentans DSM 20731] gb|ADB46985.1| Domain of unknown function DUF1828 [Acidaminococcus fermentans DSM 20731]                                                                                            SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: Domain of unknown function DUF1828; Domain of unknown function DUF1829                                                                                                                                                                         TIGRFAM:                                                                                                                        KEGG: afn:Acfer_0590 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0015    r       18758      16338      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: COG4733: Phage-related protein; tail component [Actinobacillus pleuropneumoniae serovar 1 str. 4074]                                                                                                                                                          SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: nmi:NMO_0803 putative phage tail protein                                                                                                                       COGs: COG4733 Phage-related protein tail component                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0016    r       19104      18745      prodigal   NLP/P60 protein                                                                                                        PFAM          9      nd                nd                                       nd            nd          NR top hit: NLP/P60 protein [Shewanella frigidimarina NCIMB 400] gb|ABI73817.1| NLP/P60 protein [Shewanella frigidimarina NCIMB 400]                                                                                                                                      SPTR: NLP/P60 protein;                                                                                                                                                                  PFAM: NLP/P60 protein                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: sfr:Sfri_3992 NLP/P60 protein                                                                                                                                  COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein)                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0017    r       19700      19101      prodigal   phage-related protein-like                                                                                             KEGG          13     nd                nd                                       nd            nd          NR top hit: Phage-related protein-like [Syntrophobacter fumaroxidans MPOB] gb|ABK17576.1| Phage-related protein-like [Syntrophobacter fumaroxidans MPOB]                                                                                                                  SPTR: Phage-related protein-like;                                                                                                                                                       PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: sfu:Sfum_1891 phage-related protein-like                                                                                                                       COGs: COG4672 Phage-related protein                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0018    r       20035      19697      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: ADP-heptose:LPS heptosyltransferase II [Fusobacterium ulcerans ATCC 49185]                                                                                                                                                                                    SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dvm:DvMF_1642 hypothetical protein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0019    r       21914      20322      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein HTH_0879 [Hydrogenobacter thermophilus TK-6] dbj|BAI69338.1| hypothetical protein [Hydrogenobacter thermophilus TK-6]                                                                                                                    SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: hth:HTH_0879 hypothetical protein                                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0020    r       23233      21911      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein HTH_0881 [Hydrogenobacter thermophilus TK-6] dbj|BAI69340.1| hypothetical protein [Hydrogenobacter thermophilus TK-6]                                                                                                                    SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: hth:HTH_0881 hypothetical protein                                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0021    r       23637      23236      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: DNA mismatch repair protein MutS [Enterococcus faecium 1;231;501] gb|EEV49235.1| DNA mismatch repair protein MutS [Enterococcus faecium 1;231;501]                                                                                                            SPTR: DNA mismatch repair protein MutS;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: bfu:BC1G_12613 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0022    r       23990      23637      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein LPC_2185 [Legionella pneumophila str. Corby] gb|ABQ56111.1| hypothetical protein LPC_2185 [Legionella pneumophila str. Corby]                                                                                                            SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: lpc:LPC_2185 hypothetical protein                                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0023    r       24448      23990      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: bacteriophage TP901-1 ORF40-like protein [Hydrogenobacter thermophilus TK-6] dbj|BAI69375.1| bacteriophage TP901-1 ORF40-like protein [Hydrogenobacter thermophilus TK-6]                                                                                     SPTR: Bacteriophage TP901-1 ORF40-like protein;                                                                                                                                         PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: hth:HTH_0916 bacteriophage TP901-1 ORF40-like protein                                                                                                          nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0024    r       24641      24435      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: radical SAM domain-containing protein [Pelobacter propionicus DSM 2379] gb|ABK98371.1| Radical SAM domain protein [Pelobacter propionicus DSM 2379]                                                                                                           SPTR: Radical SAM domain protein;                                                                                                                                                       PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: ppd:Ppro_0741 radical SAM domain-containing protein                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0025    r       25774      24653      prodigal   phage protein                                                                                                          KEGG          11     nd                nd                                       nd            nd          NR top hit: phage protein [Bacillus pumilus ATCC 7061] gb|EDW22173.1| phage protein [Bacillus pumilus ATCC 7061]                                                                                                                                                          SPTR: Phage protein;                                                                                                                                                                    PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: bce:BC1894 phage protein                                                                                                                                       nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0026    r       26379      25774      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein HTH_0913 [Hydrogenobacter thermophilus TK-6] dbj|BAI69372.1| hypothetical protein [Hydrogenobacter thermophilus TK-6]                                                                                                                    SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: hth:HTH_0913 hypothetical protein                                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0027    r       26747      26448      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: excisionase family protein [Arthrobacter aurescens TC1] gb|ABM09905.1| putative DNA binding domain; excisionase family protein [Arthrobacter aurescens TC1]                                                                                                   SPTR: Putative DNA binding domain; excisionase family protein;                                                                                                                          PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: aau:AAur_3179 excisionase family protein                                                                                                                       nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0028    r       27417      26773      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein PERMA_1790 [Persephonella marina EX-H1] gb|ACO03519.1| hypothetical protein PERMA_1790 [Persephonella marina EX-H1]                                                                                                                      SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1790 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0029    r       27932      27426      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein HTH_0908 [Hydrogenobacter thermophilus TK-6] dbj|BAI69367.1| hypothetical protein [Hydrogenobacter thermophilus TK-6]                                                                                                                    SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: hth:HTH_0908 hypothetical protein                                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0030    r       28482      27922      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein PERMA_1792 [Persephonella marina EX-H1] gb|ACO03312.1| hypothetical protein PERMA_1792 [Persephonella marina EX-H1]                                                                                                                      SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1792 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0031    r       29198      28479      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein HTH_0906 [Hydrogenobacter thermophilus TK-6] dbj|BAI69365.1| hypothetical protein [Hydrogenobacter thermophilus TK-6]                                                                                                                    SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: hth:HTH_0906 hypothetical protein                                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0032    r       30618      29212      prodigal   Integrase catalytic region                                                                                             PFAM          11     nd                nd                                       nd            nd          NR top hit: integrase core domain protein [Persephonella marina EX-H1] gb|ACO04172.1| integrase core domain protein [Persephonella marina EX-H1]                                                                                                                          SPTR: Integrase core domain protein;                                                                                                                                                    PFAM: Integrase catalytic region                                                                                                                                                                                                                     TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1794 integrase core domain protein                                                                                                                   nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0033    r       31899      30622      prodigal   ParB domain protein nuclease                                                                                           SMART         11     nd                nd                                       nd            nd          NR top hit: hypothetical protein PERMA_1795 [Persephonella marina EX-H1] gb|ACO04832.1| hypothetical protein PERMA_1795 [Persephonella marina EX-H1]                                                                                                                      SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1795 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0034    f       31971      32369      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: OSM3-like kinesin [Leishmania infantum JPCM5] emb|CAM70798.1| OSM3-like kinesin; putative [Leishmania infantum]                                                                                                                                               SPTR: OSM3-like kinesin; putative;                                                                                                                                                      PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: lif:LinJ32.0870 OSM3-like kinesin                                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0035    r       32637      32311      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: Xaa-Pro peptidase [Campylobacter curvus 525.92] gb|EAT99583.1| Xaa-Pro peptidase [Campylobacter curvus 525.92]                                                                                                                                                SPTR: Xaa-Pro peptidase;                                                                                                                                                                PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: ccv:CCV52592_0365 Xaa-Pro peptidase                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0036    r       33028      32651      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein Bpse7_06090 [Burkholderia pseudomallei 7894]                                                                                                                                                                                             SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: plu:plu3450 hypothetical protein                                                                                                                               nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0037    r       33799      33038      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein PERMA_1785 [Persephonella marina EX-H1] gb|ACO03226.1| hypothetical protein PERMA_1785 [Persephonella marina EX-H1]                                                                                                                      SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1785 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0038    r       34092      33799      prodigal   histone family protein DNA-binding protein                                                                             PFAM          2      nd                nd                                       nd            nd          NR top hit: integration host factor; beta subunit; putative [uncultured marine bacterium 105]                                                                                                                                                                             SPTR: Integration host factor; beta subunit; putative;                                                                                                                                  PFAM: histone family protein DNA-binding protein                                                                                                                                                                                                     TIGRFAM:                                                                                                                        KEGG: glo:Glov_1918 histone family protein DNA-binding protein                                                                                                       COGs: COG0776 Bacterial nucleoid DNA-binding protein                                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0039    r       34323      34105      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: peptidylprolyl isomerase FKBP-type [Opitutus terrae PB90-1] gb|ACB74765.1| peptidylprolyl isomerase FKBP-type [Opitutus terrae PB90-1]                                                                                                                        SPTR: Peptidyl-prolyl cis-trans isomerase;                                                                                                                                              PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: ote:Oter_1481 peptidylprolyl isomerase FKBP-type                                                                                                               nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0040    r       34589      34434      prodigal   hypothetical protein                                                                                                   hypothetical  13     nd                nd                                       nd            nd          nd                                                                                                                                                                                                                                                                        nd                                                                                                                                                                                      PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        nd                                                                                                                                                                   nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0041    r       34849      34589      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein MTH421 [Methanothermobacter thermautotrophicus str. Delta H] sp|O26521.1|Y421_METTH RecName: Full=Uncharacterized protein MTH_421 gb|AAB84927.1| unknown [Methanothermobacter thermautotrophicus str. Delta H]                           SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: mth:MTH421 hypothetical protein                                                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0042    r       35069      34884      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: matrix Gla protein; isoform CRA_b [Rattus norvegicus]                                                                                                                                                                                                         SPTR: Microneme protein MIC3;                                                                                                                                                           PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dpe:Dper_GL18894 GL18894 gene product from transcript GL18894-RA                                                                                               nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0043    r       35435      35133      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] ref|XP_001186665.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]                                                                                                           SPTR: Nop58 protein;                                                                                                                                                                    PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: spu:760031 hypothetical protein LOC760031                                                                                                                      nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0044    r       35932      35435      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: conserved hypothetical protein [bacterium Ellin514] gb|EEF61248.1| conserved hypothetical protein [bacterium Ellin514]                                                                                                                                        SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dsa:Desal_1649 transcriptional regulator CII; putative                                                                                                         nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0045    f       36050      36298      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: acyltransferase; putative [Candida dubliniensis CD36] emb|CAX44104.1| acyltransferase; putative [Candida dubliniensis CD36]                                                                                                                                   SPTR: Potential acyltransferase;                                                                                                                                                        PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: cdu:CD36_23250 acyltransferase; putative                                                                                                                       nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0046    r       36401      36204      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          nd                                                                                                                                                                                                                                                                        nd                                                                                                                                                                                      PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: scl:sce9219 general secretion pahtway protein D                                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0047    r       36637      36398      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: group 2 sigma-70 RNA polymerase sigma factor E [Cyanothece sp. ATCC 51142] gb|ACB49952.1| group 2 sigma-70 RNA polymerase sigma factor E [Cyanothece sp. ATCC 51142]                                                                                          SPTR: RNA polymerase sigma factor;                                                                                                                                                      PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: cyt:cce_0601 group 2 sigma-70 RNA polymerase sigma factor E                                                                                                    nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0048    f       36784      37452      prodigal   Peptidase S24/S26A/S26B; conserved region                                                                              PFAM          6      nd                nd                                       nd            nd          NR top hit: putative prophage repressor [Hydrogenobacter thermophilus TK-6] dbj|BAI69356.1| putative prophage repressor [Hydrogenobacter thermophilus TK-6]                                                                                                               SPTR: Putative prophage repressor;                                                                                                                                                      PFAM: Peptidase S24/S26A/S26B; conserved region; helix-turn-helix domain protein                                                                                                                                                                     TIGRFAM:                                                                                                                        KEGG: hth:HTH_0897 putative prophage repressor                                                                                                                       COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase)                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0049    f       37469      38533      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: conserved hypothetical protein [Burkholderia sp. CCGE1003] gb|EFD36397.1| conserved hypothetical protein [Burkholderia sp. CCGE1003]                                                                                                                          SPTR: Endo-1; 4-beta mannanase; man26B;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: cja:CJA_2480 endo-1;4-beta mannanase; man26B                                                                                                                   nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0050    f       38588      39484      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein Tmz1t_0115 [Thauera sp. MZ1T] gb|ACK52915.1| hypothetical protein Tmz1t_0115 [Thauera sp. MZ1T]                                                                                                                                          SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: tmz:Tmz1t_0115 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0051    f       39558      40466      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein Cflav_PD6374 [bacterium Ellin514] gb|EEF62099.1| hypothetical protein Cflav_PD6374 [bacterium Ellin514]                                                                                                                                  SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: sfu:Sfum_1886 hypothetical protein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0052    f       40476      40979      prodigal   Lytic transglycosylase catalytic                                                                                       PFAM          11     nd                nd                                       nd            nd          NR top hit: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Synergistetes bacterium SGP1]                                                                                                                      SPTR: Soluble lytic murein transglycosylase and related regulatory proteins (Some contain LysM/invasin domains);                                                                        PFAM: Lytic transglycosylase catalytic                                                                                                                                                                                                               TIGRFAM:                                                                                                                        KEGG: dvu:DVU2165 lysozyme; putative                                                                                                                                 nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0053    f       40979      41419      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein Nhal_0998 [Nitrosococcus halophilus Nc4] gb|ADE14171.1| hypothetical protein Nhal_0998 [Nitrosococcus halophilus Nc4]                                                                                                                    SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: nhl:Nhal_0998 hypothetical protein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0054    f       41416      41697      prodigal   Resolvase; Holliday junction-type                                                                                      PFAM          11     nd                nd                                       nd            nd          NR top hit: holliday junction resolvase Hjc [Persephonella marina EX-H1] gb|ACO03071.1| holliday junction resolvase Hjc [Persephonella marina EX-H1]                                                                                                                      SPTR: Holliday junction resolvase Hjc;                                                                                                                                                  PFAM: Resolvase; Holliday junction-type                                                                                                                                                                                                              TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1811 holliday junction resolvase Hjc                                                                                                                 nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0055    f       41687      42106      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: chromosome segregation protein [Pyrococcus horikoshii OT3] sp|O58687.1|RAD50_PYRHO RecName: Full=DNA double-strand break repair rad50 ATPase dbj|BAA30025.1| 879aa long hypothetical purine NTPase [Pyrococcus horikoshii OT3]                                SPTR: DNA double-strand break repair rad50 ATPase;                                                                                                                                      PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: pho:PH0929 chromosome segregation protein                                                                                                                      nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0056    f       42085      42375      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein HTH_0884 [Hydrogenobacter thermophilus TK-6] dbj|BAI69343.1| hypothetical protein [Hydrogenobacter thermophilus TK-6]                                                                                                                    SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: hth:HTH_0884 hypothetical protein                                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0057    f       42375      42869      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein VOA_001659 [Vibrio sp. RC586] gb|EEY99310.1| hypothetical protein VOA_001659 [Vibrio sp. RC586]                                                                                                                                          SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: eca:ECA3718 phage-like protein                                                                                                                                 nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0058    f       42871      44130      prodigal   protein of unknown function DUF264                                                                                     KEGG          11     nd                nd                                       nd            nd          NR top hit: protein of unknown function DUF264 [Meiothermus silvanus DSM 9946] gb|ADH63786.1| protein of unknown function DUF264 [Meiothermus silvanus DSM 9946]                                                                                                          SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: msv:Mesil_1911 protein of unknown function DUF264                                                                                                              COGs: COG4373 Mu-like prophage FluMu protein gp28                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0059    f       44141      44449      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: Dna-J like membrane chaperone protein [Vibrionales bacterium SWAT-3] gb|EDK28562.1| Dna-J like membrane chaperone protein [Vibrionales bacterium SWAT-3]                                                                                                      SPTR: Dna-J like membrane chaperone protein;                                                                                                                                            PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: vha:VIBHAR_00812 Dna-J like membrane chaperone protein                                                                                                         nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0060    f       44745      47786      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: tail tape meausure protein; putative [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] ref|ZP_04793261.1| hypothetical protein DevalDRAFT_2371 [Desulfovibrio vulgaris RCH1] gb|AAS96630.1| tail tape meausure protein; putative-TRUNCATED-         SPTR: Tail tape meausure protein; putative;                                                                                                                                             PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dvu:DVU2157 tail tape measure protein; putative                                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0061    f       47856      48239      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein GK0543 [Geobacillus kaustophilus HTA426] dbj|BAD74828.1| phage-related protein [Geobacillus kaustophilus HTA426]                                                                                                                         SPTR: Phage-related protein;                                                                                                                                                            PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: gka:GK0543 hypothetical protein                                                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0062    f       48241      49149      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein PERMA_1823 [Persephonella marina EX-H1] gb|ACO03584.1| hypothetical protein PERMA_1823 [Persephonella marina EX-H1]                                                                                                                      SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1823 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0063    f       49162      49695      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: myosin heavy chain protein [Saccoglossus kowalevskii] gb|ACY92575.1| myosin heavy chain protein [Saccoglossus kowalevskii]                                                                                                                                    SPTR: Myosin heavy chain protein;                                                                                                                                                       PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: bbo:BBOV_III009970 hypothetical protein                                                                                                                        nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0064    f       49688      50215      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein VspiD_24295 [Verrucomicrobium spinosum DSM 4136]                                                                                                                                                                                         SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: rsc:RCFBP_11741 conserved phage protein of unknown function                                                                                                    nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0065    r       53857      50747      prodigal   acriflavin resistance protein                                                                                          PFAM          9      nd                nd                                       nd            nd          NR top hit: acriflavin resistance protein [Hydrogenobaculum sp. SN] gb|EFD31549.1| acriflavin resistance protein [Hydrogenobaculum sp. SN]                                                                                                                                SPTR: Acriflavin resistance protein;                                                                                                                                                    PFAM: acriflavin resistance protein                                                                                                                                                                                                                  TIGRFAM:                                                                                                                        KEGG: dae:Dtox_0522 acriflavin resistance protein                                                                                                                    COGs: COG0841 Cation/multidrug efflux pump                                                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0066    r       55034      53850      prodigal   efflux transporter; RND family; MFP subunit                                                                            TIGR          9      nd                nd                                       nd            nd          NR top hit: putative efflux transporter; RND family; MFP subunit [Persephonella marina EX-H1] gb|ACO03833.1| putative efflux transporter; RND family; MFP subunit [Persephonella marina EX-H1]                                                                            SPTR: Putative efflux transporter; RND family; MFP subunit;                                                                                                                             PFAM: secretion protein HlyD family protein                                                                                                                                                                                                          TIGRFAM: efflux transporter; RND family; MFP subunit                                                                            KEGG: pmx:PERMA_1543 putative efflux transporter; RND family; MFP subunit                                                                                            COGs: COG1566 Multidrug resistance efflux pump                                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0067    r       56301      55024      prodigal   outer membrane efflux protein                                                                                          PFAM          9      nd                nd                                       nd            nd          NR top hit: outer membrane efflux protein [Persephonella marina EX-H1] gb|ACO04274.1| outer membrane efflux protein [Persephonella marina EX-H1]                                                                                                                          SPTR: Outer membrane efflux protein;                                                                                                                                                    PFAM: outer membrane efflux protein                                                                                                                                                                                                                  TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1544 outer membrane efflux protein                                                                                                                   COGs: COG1538 Outer membrane protein                                                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0068    f       56430      57161      prodigal   protein of unknown function DUF81                                                                                      PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein DP2513 [Desulfotalea psychrophila LSv54] emb|CAG37242.1| conserved hypothetical membrane protein [Desulfotalea psychrophila LSv54]                                                                                                       SPTR: Conserved hypothetical membrane protein;                                                                                                                                          PFAM: protein of unknown function DUF81                                                                                                                                                                                                              TIGRFAM:                                                                                                                        KEGG: dps:DP2513 hypothetical protein                                                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0069    f       57173      57553      prodigal   Rhodanese domain protein                                                                                               SMART         11     nd                nd                                       nd            nd          NR top hit: hypothetical protein DP1064 [Desulfotalea psychrophila LSv54] emb|CAG35793.1| hypothetical protein [Desulfotalea psychrophila LSv54]                                                                                                                          SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dps:DP1064 hypothetical protein                                                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0070    f       57555      57932      prodigal   regulatory protein ArsR                                                                                                PFAM          11     nd                nd                                       nd            nd          NR top hit: transcriptional regulator; ArsR family [Chloroherpeton thalassium ATCC 35110] gb|ACF13658.1| transcriptional regulator; ArsR family [Chloroherpeton thalassium ATCC 35110]                                                                                    SPTR: Transcriptional regulator; ArsR family;                                                                                                                                           PFAM: regulatory protein ArsR                                                                                                                                                                                                                        TIGRFAM:                                                                                                                        KEGG: cts:Ctha_1194 transcriptional regulator; ArsR family                                                                                                           nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0071    f       57913      58581      prodigal   carbonic anhydrase                                                                                                     PFAM          9      nd                nd                                       nd            nd          NR top hit: carbonic anhydrase [Lutiella nitroferrum 2002] gb|EEG09364.1| carbonic anhydrase [Lutiella nitroferrum 2002]                                                                                                                                                  SPTR: Carbonic anhydrase;                                                                                                                                                               PFAM: carbonic anhydrase                                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: swo:Swol_2452 carbonic anhydrase-like protein                                                                                                                  COGs: COG0288 Carbonic anhydrase                                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0072    r       59622      58585      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein THEYE_A0066 [Thermodesulfovibrio yellowstonii DSM 11347] gb|ACI21257.1| hypothetical protein THEYE_A0066 [Thermodesulfovibrio yellowstonii DSM 11347]                                                                                    SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: tye:THEYE_A0066 hypothetical protein                                                                                                                           nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0073    r       60540      59686      prodigal   methylthioadenosine phosphorylase                                                                                      TIGR          16     nd                nd                                       nd            nd          NR top hit: Methylthioadenosine phosphorylase [Desulfuromonas acetoxidans DSM 684] gb|EAT16227.1| Methylthioadenosine phosphorylase [Desulfuromonas acetoxidans DSM 684]                                                                                                  SPTR: Methylthioadenosine phosphorylase;                                                                                                                                                PFAM: purine or other phosphorylase family 1                                                                                                                                                                                                         TIGRFAM: methylthioadenosine phosphorylase                                                                                      KEGG: pca:Pcar_2021 methylthioadenosine phosphorylase                                                                                                                COGs: COG0005 Purine nucleoside phosphorylase                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0074    r       60838      60542      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: 50S ribosomal protein L19 [Caminibacter mediatlanticus TB-2] gb|EDM24534.1| 50S ribosomal protein L19 [Caminibacter mediatlanticus TB-2]                                                                                                                      SPTR: 50S ribosomal protein L19;                                                                                                                                                        PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: nam:NAMH_0283 hypothetical protein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0075    r       61640      60882      prodigal   imidazoleglycerol phosphate synthase; cyclase subunit                                                                  TIGR          10     nd                nd                                       nd            nd          NR top hit: imidazole glycerol phosphate synthase subunit HisF [Persephonella marina EX-H1] sp|C0QPQ6.1|HIS6_PERMH RecName: Full=Imidazole glycerol phosphate synthase subunit hisF; AltName: Full=IGP synthase cyclase subunit; AltName: -TRUNCATED-                     SPTR: Imidazole glycerol phosphate synthase subunit hisF;                                                                                                                               PFAM: histidine biosynthesis protein                                                                                                                                                                                                                 TIGRFAM: imidazoleglycerol phosphate synthase; cyclase subunit                                                                  KEGG: pmx:PERMA_0864 imidazole glycerol phosphate synthase subunit HisF                                                                                              COGs: COG0107 Imidazoleglycerol-phosphate synthase                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0076    r       63019      61709      prodigal   thiamine biosynthesis protein ThiC                                                                                     TIGR          12     nd                nd                                       nd            nd          NR top hit: thiamine biosynthesis protein ThiC [Moorella thermoacetica ATCC 39073] sp|Q2RIM5.1|THIC1_MOOTA RecName: Full=Phosphomethylpyrimidine synthase 1; AltName: Full=Hydroxymethylpyrimidine phosphate synthase 1; Short=HMP-phosphate-TRUNCATED-                   SPTR: Phosphomethylpyrimidine synthase 1;                                                                                                                                               PFAM: thiamine biosynthesis protein ThiC                                                                                                                                                                                                             TIGRFAM: thiamine biosynthesis protein ThiC                                                                                     KEGG: mta:Moth_1401 thiamine biosynthesis protein ThiC                                                                                                               COGs: COG0422 Thiamine biosynthesis protein ThiC                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0077    r       63825      63019      prodigal   thiazole biosynthesis enzyme                                                                                           TIGR          12     nd                nd                                       nd            nd          NR top hit: thiazole biosynthesis enzyme [Thermincola sp. JR] gb|ADG82299.1| thiazole biosynthesis enzyme [Thermincola sp. JR]                                                                                                                                            SPTR: Thiazole biosynthesis enzyme;                                                                                                                                                     PFAM:                                                                                                                                                                                                                                                TIGRFAM: thiazole biosynthesis enzyme                                                                                           KEGG: tjr:TherJR_1442 thiazole biosynthesis enzyme                                                                                                                   COGs: COG1635 Flavoprotein involved in thiazole biosynthesis                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0078    r       65390      64095      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: DEHA2C08778p [Debaryomyces hansenii CBS767] emb|CAG86127.2| DEHA2C08778p [Debaryomyces hansenii]                                                                                                                                                              SPTR: DEHA2C08778p;                                                                                                                                                                     PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dha:DEHA2C08778g DEHA2C08778p                                                                                                                                  nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0079    r       66668      65448      prodigal   amidohydrolase                                                                                                         TIGR          11     nd                nd                                       nd            nd          NR top hit: amidohydrolase [Hydrogenivirga sp. 128-5-R1-1] gb|EDP73392.1| amidohydrolase [Hydrogenivirga sp. 128-5-R1-1]                                                                                                                                                  SPTR: Amidohydrolase;                                                                                                                                                                   PFAM: peptidase M20; peptidase dimerisation domain protein                                                                                                                                                                                           TIGRFAM: amidohydrolase                                                                                                         KEGG: pmx:PERMA_0047 thermostable carboxypeptidase 1                                                                                                                 COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0080    f       66740      67333      prodigal   orotate phosphoribosyltransferase                                                                                      TIGR          16     nd                nd                                       nd            nd          NR top hit: orotate phosphoribosyltransferase [Thermotoga petrophila RKU-1] ref|YP_001738638.1| orotate phosphoribosyltransferase [Thermotoga sp. RQ2] ref|YP_002533879.1| Orotate phosphoribosyltransferase [Thermotoga neapolitana DSM 4359] ref|ZP_05-TRUNCATED-       SPTR: Orotate phosphoribosyltransferase;                                                                                                                                                PFAM: phosphoribosyltransferase                                                                                                                                                                                                                      TIGRFAM: orotate phosphoribosyltransferase                                                                                      KEGG: tna:CTN_0337 orotate phosphoribosyltransferase                                                                                                                 COGs: COG0461 Orotate phosphoribosyltransferase                                                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0081    f       67338      68312      prodigal   Polyprenyl synthetase                                                                                                  PFAM          12     nd                nd                                       nd            nd          NR top hit: octaprenyl-diphosphate synthase [Persephonella marina EX-H1] gb|ACO03687.1| octaprenyl-diphosphate synthase [Persephonella marina EX-H1]                                                                                                                      SPTR: Octaprenyl-diphosphate synthase;                                                                                                                                                  PFAM: Polyprenyl synthetase                                                                                                                                                                                                                          TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1511 octaprenyl-diphosphate synthase                                                                                                                 COGs: COG0142 Geranylgeranyl pyrophosphate synthase                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0082    r       68700      68290      prodigal   nucleotidyltransferase substrate binding protein; HI0074 family                                                        TIGR          11     nd                nd                                       nd            nd          NR top hit: nucleotidyltransferase substrate binding protein; HI0074 family [Hydrogenobaculum sp. SN] gb|EFD30616.1| nucleotidyltransferase substrate binding protein; HI0074 family [Hydrogenobaculum sp. SN]                                                            SPTR: Nucleotidyltransferase substrate binding protein; HI0074 family;                                                                                                                  PFAM: Nucleotidyltransferase substrate binding protein HI0074                                                                                                                                                                                        TIGRFAM: nucleotidyltransferase substrate binding protein; HI0074 family                                                        KEGG: hya:HY04AAS1_1590 nucleotidyltransferase substrate binding protein; HI0074 family                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0083    r       69023      68658      prodigal   DNA polymerase beta domain protein region                                                                              PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein HG1285_16430 [Hydrogenivirga sp. 128-5-R1-1] gb|EDP75568.1| hypothetical protein HG1285_16430 [Hydrogenivirga sp. 128-5-R1-1]                                                                                                            SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: DNA polymerase beta domain protein region                                                                                                                                                                                                      TIGRFAM:                                                                                                                        KEGG: aae:aq_507 hypothetical protein                                                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0084    r       69949      68975      prodigal   NAD-dependent epimerase/dehydratase                                                                                    PFAM          9      nd                nd                                       nd            nd          NR top hit: NAD-dependent epimerase/dehydratase [Sulfurihydrogenibium sp. YO3AOP1] gb|ACD65809.1| NAD-dependent epimerase/dehydratase [Sulfurihydrogenibium sp. YO3AOP1]                                                                                                  SPTR: NAD-dependent epimerase/dehydratase;                                                                                                                                              PFAM: NAD-dependent epimerase/dehydratase                                                                                                                                                                                                            TIGRFAM:                                                                                                                        KEGG: sul:SYO3AOP1_0164 NAD-dependent epimerase/dehydratase                                                                                                          COGs: COG0451 Nucleoside-diphosphate-sugar epimerase                                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0085    f       70022      73537      prodigal   chromosome segregation protein SMC                                                                                     TIGR          9      nd                nd                                       nd            nd          NR top hit: chromosome segregation protein SMC [Clostridium novyi NT] gb|ABK60490.1| chromosome segregation protein SMC [Clostridium novyi NT]                                                                                                                            SPTR: Chromosome segregation protein SMC;                                                                                                                                               PFAM: SMC domain protein                                                                                                                                                                                                                             TIGRFAM: chromosome segregation protein SMC                                                                                     KEGG: cno:NT01CX_2216 chromosome segregation protein SMC                                                                                                             COGs: COG1196 Chromosome segregation ATPase                                                                                                                                                     
tam15698  08/20/2010  Contig31    Theam_0086    r       74611      74063      prodigal   putative lipoprotein                                                                                                   KEGG          11     nd                nd                                       nd            nd          NR top hit: putative lipoprotein [Desulfovibrio vulgaris subsp. vulgaris DP4] gb|ABM28080.1| lipoprotein; putative [Desulfovibrio vulgaris DP4]                                                                                                                           SPTR: Lipoprotein; putative;                                                                                                                                                            PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dvl:Dvul_1060 putative lipoprotein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0087    r       74992      74816      prodigal   4Fe-4S ferredoxin iron-sulfur binding domain protein                                                                   KEGG          3      nd                nd                                       nd            nd          NR top hit: hypothetical protein HOLDEFILI_03709 [Holdemania filiformis DSM 12042] gb|EEF66139.1| hypothetical protein HOLDEFILI_03709 [Holdemania filiformis DSM 12042]                                                                                                  SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: tmt:Tmath_0913 4Fe-4S ferredoxin iron-sulfur binding domain protein                                                                                            COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)                                                                                            
tam15698  08/20/2010  Contig31    Theam_0088    r       75562      75005      prodigal   ribosome recycling factor                                                                                              TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosome recycling factor [Persephonella marina EX-H1] gb|ACO04380.1| ribosome recycling factor [Persephonella marina EX-H1]                                                                                                                                  SPTR: Ribosome-recycling factor;                                                                                                                                                        PFAM: ribosome recycling factor                                                                                                                                                                                                                      TIGRFAM: ribosome recycling factor                                                                                              KEGG: pmx:PERMA_0234 ribosome recycling factor                                                                                                                       COGs: COG0233 Ribosome recycling factor                                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0089    r       76281      75559      prodigal   uridylate kinase                                                                                                       TIGR          16     nd                nd                                       nd            nd          NR top hit: uridylate kinase [Pelobacter carbinolicus DSM 2380] sp|Q3A397.1|PYRH_PELCD RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK gb|ABA89160.1| uridylate kinase [Pelobacter -TRUNCATED-         SPTR: Uridylate kinase;                                                                                                                                                                 PFAM: aspartate/glutamate/uridylate kinase                                                                                                                                                                                                           TIGRFAM: uridylate kinase                                                                                                       KEGG: pca:Pcar_1919 uridylate kinase                                                                                                                                 COGs: COG0528 Uridylate kinase                                                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0090    r       76943      76347      prodigal   translation elongation factor Ts                                                                                       TIGR          7      nd                nd                                       nd            nd          NR top hit: elongation factor Ts [Persephonella marina EX-H1] sp|C0QTL3.1|EFTS_PERMH RecName: Full=Elongation factor Ts; Short=EF-Ts gb|ACO03822.1| translation elongation factor Ts [Persephonella marina EX-H1]                                                         SPTR: Elongation factor Ts;                                                                                                                                                             PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein                                                                                                                                          TIGRFAM: translation elongation factor Ts                                                                                       KEGG: pmx:PERMA_0232 elongation factor Ts                                                                                                                            COGs: COG0264 Translation elongation factor Ts                                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0091    r       77858      76995      prodigal   ribosomal protein S2                                                                                                   TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein S2 [Geobacillus sp. Y412MC52] ref|YP_003671851.1| ribosomal protein S2 [Geobacillus sp. C56-T3] gb|EEN95151.1| ribosomal protein S2 [Geobacillus sp. Y412MC52] gb|ADI27274.1| ribosomal protein S2 [Geobacillus sp. C56-T3]                 SPTR: Ribosomal protein S2;                                                                                                                                                             PFAM: ribosomal protein S2                                                                                                                                                                                                                           TIGRFAM: ribosomal protein S2                                                                                                   KEGG: gct:GC56T3_2304 ribosomal protein S2                                                                                                                           COGs: COG0052 Ribosomal protein S2                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0092    r       79556      78000      prodigal   5-oxoprolinase (ATP-hydrolyzing)                                                                                       PRIAM         10     nd                nd                                       nd            nd          NR top hit: 5-oxoprolinase (5-oxo-L-prolinase) (Pyroglutamase) (5-OPase) [Persephonella marina EX-H1] gb|ACO03927.1| 5-oxoprolinase (5-oxo-L-prolinase) (Pyroglutamase) (5-OPase) [Persephonella marina EX-H1]                                                            SPTR: 5-oxoprolinase (5-oxo-L-prolinase) (Pyroglutamase) (5-OPase);                                                                                                                     PFAM: Hydantoinase B/oxoprolinase                                                                                                                                                                                                                    TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1470 5-oxoprolinase (5-oxo-L-prolinase) (pyroglutamase) (5-OPase)                                                                                    COGs: COG0146 N-methylhydantoinase B/acetone carboxylase alpha subunit                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0093    r       81519      79549      prodigal   5-oxoprolinase (ATP-hydrolyzing)                                                                                       PRIAM         10     nd                nd                                       nd            nd          NR top hit: N-methylhydantoinase A [Hydrogenivirga sp. 128-5-R1-1] gb|EDP76245.1| N-methylhydantoinase A [Hydrogenivirga sp. 128-5-R1-1]                                                                                                                                  SPTR: N-methylhydantoinase A;                                                                                                                                                           PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: aae:aq_708 N-methylhydantoinase A                                                                                                                              COGs: COG0145 N-methylhydantoinase A/acetone carboxylase beta subunit                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0094    f       81583      82245      prodigal   ubiquinone/menaquinone biosynthesis methyltransferase                                                                  TIGR          12     nd                nd                                       nd            nd          NR top hit: ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Flavobacterium psychrophilum JIP02/86] emb|CAL42440.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Flavobacterium psychrophilum JIP02/86]                                         SPTR: Menaquinone biosynthesis methyltransferase ubiE;                                                                                                                                  PFAM: Methyltransferase type 11                                                                                                                                                                                                                      TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase                                                                  KEGG: fps:FP0327 ubiquinone/menaquinone biosynthesis methyltransferase UbiE                                                                                          COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0095    f       82313      83539      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein DaAHT2_2118 [Desulfurivibrio alkaliphilus AHT2] gb|ADH86789.1| hypothetical protein DaAHT2_2118 [Desulfurivibrio alkaliphilus AHT2]                                                                                                      SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dak:DaAHT2_2118 hypothetical protein                                                                                                                           nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0096    r       84347      83559      prodigal   protein of unknown function DUF81                                                                                      PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein VSWAT3_08481 [Vibrionales bacterium SWAT-3] gb|EDK27593.1| hypothetical protein VSWAT3_08481 [Vibrionales bacterium SWAT-3]                                                                                                              SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function DUF81                                                                                                                                                                                                              TIGRFAM:                                                                                                                        KEGG: vsp:VS_0525 hypothetical protein                                                                                                                               COGs: COG0730 permease                                                                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0097    r       84697      84380      prodigal   CutA1 divalent ion tolerance protein                                                                                   PFAM          9      nd                nd                                       nd            nd          NR top hit: probable divalent-cation tolerance protein [uncultured archaeon]                                                                                                                                                                                              SPTR: Probable divalent-cation tolerance protein;                                                                                                                                       PFAM: CutA1 divalent ion tolerance protein                                                                                                                                                                                                           TIGRFAM:                                                                                                                        KEGG: reh:H16_A3456 periplasmic divalent cation tolerance protein CutA                                                                                               COGs: COG1324 conserved hypothetical protein involved in tolerance to divalent cations                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0098    f       84810      85655      prodigal   apurinic endonuclease Apn1                                                                                             TIGR          2      nd                nd                                       nd            nd          NR top hit: endonuclease IV [Nitratiruptor sp. SB155-2] sp|A6Q1P1.1|END4_NITSB RecName: Full=Probable endonuclease 4; AltName: Full=Endonuclease IV; AltName: Full=Endodeoxyribonuclease IV dbj|BAF69400.1| endonuclease IV [Nitratiruptor sp. SB15-TRUNCATED-            SPTR: Probable endonuclease 4;                                                                                                                                                          PFAM: Xylose isomerase domain-containing protein TIM barrel                                                                                                                                                                                          TIGRFAM: apurinic endonuclease Apn1                                                                                             KEGG: nis:NIS_0286 endonuclease IV                                                                                                                                   COGs: COG0648 Endonuclease IV                                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0099    f       85694      86356      prodigal   phosphoribosyltransferase                                                                                              PFAM          11     nd                nd                                       nd            nd          NR top hit: phosphoribosyltransferase [Candidatus Desulforudis audaxviator MP104C] gb|ACA60711.1| phosphoribosyltransferase [Candidatus Desulforudis audaxviator MP104C]                                                                                                  SPTR: Phosphoribosyltransferase;                                                                                                                                                        PFAM: phosphoribosyltransferase                                                                                                                                                                                                                      TIGRFAM:                                                                                                                        KEGG: dau:Daud_2224 phosphoribosyltransferase                                                                                                                        COGs: COG1926 phosphoribosyltransferase                                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0100    r       86733      86371      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein DSY1594 [Desulfitobacterium hafniense Y51] dbj|BAE83383.1| hypothetical protein [Desulfitobacterium hafniense Y51]                                                                                                                       SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dhd:Dhaf_2737 protein of unknown function DUF1333                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0101    f       86882      87304      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: amino acid efflux LysE family protein [Rhizobium etli GR56]                                                                                                                                                                                                   SPTR: Probable amino acid efflux protein; LysE family;                                                                                                                                  PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: rec:RHECIAT_CH0000256 probable amino acid efflux protein; LysE family                                                                                          nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0102    f       87297      87896      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: acyl-CoA synthetase [Frankia sp. CcI3] gb|ABD12339.1| AMP-dependent synthetase and ligase [Frankia sp. CcI3]                                                                                                                                                  SPTR: AMP-dependent synthetase and ligase;                                                                                                                                              PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: fra:Francci3_2982 acyl-CoA synthetase                                                                                                                          nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0103    f       87897      88226      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: DNA-cytosine methyltransferase [Bacillus cereus BDRD-ST24] gb|EEK96239.1| DNA-cytosine methyltransferase [Bacillus cereus BDRD-ST24]                                                                                                                          SPTR: Histidine kinase;                                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: gme:Gmet_2454 histidine kinase                                                                                                                                 nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0104    f       88236      89081      prodigal   beta-lactamase domain protein                                                                                          KEGG          3      nd                nd                                       nd            nd          NR top hit: beta-lactamase domain protein [Desulfurivibrio alkaliphilus AHT2] gb|ADH85631.1| beta-lactamase domain protein [Desulfurivibrio alkaliphilus AHT2]                                                                                                            SPTR: Beta-lactamase domain protein;                                                                                                                                                    PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dak:DaAHT2_0927 beta-lactamase domain protein                                                                                                                  COGs: COG0426 flavoprotein                                                                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0105    f       89084      89458      prodigal   Roadblock/LC7 family protein                                                                                           PFAM          11     nd                nd                                       nd            nd          NR top hit: roadblock/LC7 family protein [Roseiflexus sp. RS-1] gb|ABQ92265.1| Roadblock/LC7 family protein [Roseiflexus sp. RS-1]                                                                                                                                        SPTR: Roadblock/LC7 family protein;                                                                                                                                                     PFAM: Roadblock/LC7 family protein                                                                                                                                                                                                                   TIGRFAM:                                                                                                                        KEGG: rrs:RoseRS_3912 roadblock/LC7 family protein                                                                                                                   nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0106    r       90726      89455      prodigal   pyrimidine-nucleoside phosphorylase                                                                                    TIGR          16     nd                nd                                       nd            nd          NR top hit: pyrimidine-nucleoside phosphorylase [Thermotoga maritima MSB8] gb|AAD36720.1|AE001807_11 pyrimidine-nucleoside phosphorylase [Thermotoga maritima MSB8]                                                                                                       SPTR: Pyrimidine-nucleoside phosphorylase;                                                                                                                                              PFAM: Pyrimidine nucleoside phosphorylase  domain; Glycosyl transferase; family 3-like; glycosyl transferase family 3                                                                                                                                TIGRFAM: pyrimidine-nucleoside phosphorylase                                                                                    KEGG: tma:TM1653 pyrimidine-nucleoside phosphorylase                                                                                                                 COGs: COG0213 Thymidine phosphorylase                                                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0107    r       91366      90740      prodigal   peptidase M50                                                                                                          PFAM          11     nd                nd                                       nd            nd          NR top hit: peptidase M50 [Dethiobacter alkaliphilus AHT 1] gb|EEG78286.1| peptidase M50 [Dethiobacter alkaliphilus AHT 1]                                                                                                                                                SPTR: Peptidase M50;                                                                                                                                                                    PFAM: peptidase M50                                                                                                                                                                                                                                  TIGRFAM:                                                                                                                        KEGG: swo:Swol_1419 peptidase M50                                                                                                                                    COGs: COG1994 Zn-dependent protease                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0108    r       91984      91379      prodigal   AMMECR1 domain protein                                                                                                 PFAM          13     nd                nd                                       nd            nd          NR top hit: conserved hypothetical protein TIGR00296 [Thermococcus sp. AM4] gb|EEB74233.1| conserved hypothetical protein TIGR00296 [Thermococcus sp. AM4]                                                                                                                SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: AMMECR1 domain protein                                                                                                                                                                                                                         TIGRFAM:                                                                                                                        KEGG: tga:TGAM_1450 hypothetical protein                                                                                                                             COGs: COG2078 conserved hypothetical protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0109    r       92422      92048      prodigal   CrcB protein                                                                                                           TIGR          9      nd                nd                                       nd            nd          NR top hit: camphor resistance protein CrcB [Nitratiruptor sp. SB155-2] sp|A6Q4S3.1|CRCB_NITSB RecName: Full=Protein crcB homolog dbj|BAF70482.1| camphor resistance protein CrcB [Nitratiruptor sp. SB155-2]                                                             SPTR: Protein crcB homolog;                                                                                                                                                             PFAM: Camphor resistance CrcB protein                                                                                                                                                                                                                TIGRFAM: CrcB protein                                                                                                           KEGG: nis:NIS_1374 camphor resistance protein CrcB                                                                                                                   COGs: COG0239 Integral membrane protein possibly involved in chromosome condensation                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0110    r       93564      92419      prodigal   ATP-cone domain protein                                                                                                PFAM          4      nd                nd                                       nd            nd          NR top hit: 2-phosphoglycerate kinase [Thermus aquaticus Y51MC23] gb|EED10952.1| 2-phosphoglycerate kinase [Thermus aquaticus Y51MC23]                                                                                                                                    SPTR: 2-phosphoglycerate kinase;                                                                                                                                                        PFAM: ATP-cone domain protein                                                                                                                                                                                                                        TIGRFAM:                                                                                                                        KEGG: msv:Mesil_1353 ATP-cone domain protein                                                                                                                         COGs: COG2074 2-phosphoglycerate kinase                                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0111    r       94564      93542      prodigal   aminodeoxychorismate lyase                                                                                             PFAM          11     nd                nd                                       nd            nd          NR top hit: aminodeoxychorismate lyase [Thermocrinis albus DSM 14484] gb|ADC88784.1| aminodeoxychorismate lyase [Thermocrinis albus DSM 14484]                                                                                                                            SPTR: Aminodeoxychorismate lyase;                                                                                                                                                       PFAM: aminodeoxychorismate lyase                                                                                                                                                                                                                     TIGRFAM:                                                                                                                        KEGG: tal:Thal_0148 aminodeoxychorismate lyase                                                                                                                       COGs: COG1559 periplasmic solute-binding protein                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0112    r       95144      94566      prodigal   CDP-alcohol phosphatidyltransferase                                                                                    PFAM          5      nd                nd                                       nd            nd          NR top hit: CDP-alcohol phosphatidyltransferase [Persephonella marina EX-H1] gb|ACO03305.1| CDP-alcohol phosphatidyltransferase [Persephonella marina EX-H1]                                                                                                              SPTR: CDP-alcohol phosphatidyltransferase;                                                                                                                                              PFAM: CDP-alcohol phosphatidyltransferase                                                                                                                                                                                                            TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_0500 CDP-alcohol phosphatidyltransferase                                                                                                             COGs: COG0558 Phosphatidylglycerophosphate synthase                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0113    r       95808      95200      prodigal   MglA protein                                                                                                           KEGG          11     nd                nd                                       nd            nd          NR top hit: MglA protein [Geobacter sulfurreducens PCA] gb|AAR33434.1| MglA protein [Geobacter sulfurreducens PCA] gb|ADI82938.1| gliding motility protein MglA [Geobacter sulfurreducens KN400]                                                                          SPTR: MglA protein;                                                                                                                                                                     PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: gsu:GSU0099 MglA protein                                                                                                                                       nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0114    r       96441      95845      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: methyl-accepting chemotaxis protein 4 [Thermosipho africanus TCF52B] gb|ACJ74600.1| methyl-accepting chemotaxis protein 4 [Thermosipho africanus TCF52B]                                                                                                      SPTR: Methyl-accepting chemotaxis protein 4;                                                                                                                                            PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: taf:THA_92 methyl-accepting chemotaxis protein 4                                                                                                               nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0115    r       96695      96465      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein ABOONEI_1573 [Aciduliprofundum boonei T469] ref|YP_003483343.1| hypothetical protein Aboo_0972 [Aciduliprofundum boonei T469] gb|EDY35788.1| hypothetical protein ABOONEI_1573 [Aciduliprofundum boonei T469] gb|ADD0878-TRUNCATED-      SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: abi:Aboo_0972 hypothetical protein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0116    r       97065      96709      prodigal   Roadblock/LC7 family protein                                                                                           PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein aq_1847 [Aquifex aeolicus VF5] gb|AAC07671.1| hypothetical protein aq_1847 [Aquifex aeolicus VF5]                                                                                                                                        SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: Roadblock/LC7 family protein                                                                                                                                                                                                                   TIGRFAM:                                                                                                                        KEGG: aae:aq_1847 hypothetical protein                                                                                                                               COGs: COG2018 Uncharacterized distant relative of homeotic protein bithoraxoid                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0117    f       97415      97876      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein UM02602.1 [Ustilago maydis 521] gb|EAK83772.1| hypothetical protein UM02602.1 [Ustilago maydis 521]                                                                                                                                      SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: uma:UM02602.1 hypothetical protein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0118    f       97916      98293      prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: galactoside ABC superfamily ATP binding cassette transporter; binding protein [Oribacterium sinus F0268] gb|EEJ50476.1| galactoside ABC superfamily ATP binding cassette transporter; binding protein [Oribacterium sinus F0268]                              SPTR: Galactoside ABC superfamily ATP binding cassette transporter; binding protein;                                                                                                    PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dsy:DSY2987 hypothetical protein                                                                                                                               nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0119    f       98293      99210      prodigal   conserved hypothetical protein                                                                                         TIGR          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein aq_632 [Aquifex aeolicus VF5] gb|AAC06843.1| hypothetical protein aq_632 [Aquifex aeolicus VF5]                                                                                                                                          SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: Radical SAM domain protein                                                                                                                                                                                                                     TIGRFAM: conserved hypothetical protein                                                                                         KEGG: aae:aq_632 hypothetical protein                                                                                                                                COGs: COG1242 Fe-S oxidoreductase                                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0120    r       99620      99207      prodigal   protein of unknown function DUF163                                                                                     PFAM          13     nd                nd                                       nd            nd          NR top hit: RecName: Full=Ribosomal RNA large subunit methyltransferase H; AltName: Full=rRNA (pseudouridine-N3-)-methyltransferase rlmH; AltName: Full=23S rRNA m3Psi1915 methyltransferase                                                                              SPTR: Ribosomal RNA large subunit methyltransferase H;                                                                                                                                  PFAM: protein of unknown function DUF163                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: pmn:PMN2A_0276 hypothetical protein                                                                                                                            COGs: COG1576 conserved hypothetical protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0121    r       99979      99617      prodigal   iojap-like protein                                                                                                     TIGR          13     nd                nd                                       nd            nd          NR top hit: iojap-like protein [Pelodictyon phaeoclathratiforme BU-1] gb|ACF42451.1| iojap-like protein [Pelodictyon phaeoclathratiforme BU-1]                                                                                                                            SPTR: Iojap-like protein;                                                                                                                                                               PFAM: Iojap-related protein                                                                                                                                                                                                                          TIGRFAM: iojap-like protein                                                                                                     KEGG: pph:Ppha_0095 iojap-like protein                                                                                                                               COGs: COG0799 Iojap protein                                                                                                                                                                     
tam15698  08/20/2010  Contig31    Theam_0122    r       100943     99993      prodigal   outer membrane assembly lipoprotein YfiO                                                                               TIGR          11     nd                nd                                       nd            nd          NR top hit: putative lipoprotein [Hydrogenobaculum sp. Y04AAS1] gb|ACG57834.1| putative lipoprotein [Hydrogenobaculum sp. Y04AAS1]                                                                                                                                        SPTR: Putative lipoprotein;                                                                                                                                                             PFAM:                                                                                                                                                                                                                                                TIGRFAM: outer membrane assembly lipoprotein YfiO                                                                               KEGG: hya:HY04AAS1_1148 putative lipoprotein                                                                                                                         COGs: COG4105 DNA uptake lipoprotein                                                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0123    r       102467     100965     prodigal   ribonuclease; Rne/Rng family                                                                                           TIGR          7      nd                nd                                       nd            nd          NR top hit: ribonuclease G [Geobacter sulfurreducens PCA] gb|AAR36630.1| ribonuclease G [Geobacter sulfurreducens PCA]                                                                                                                                                    SPTR: Ribonuclease G;                                                                                                                                                                   PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein                                                                                                                                                                       TIGRFAM: ribonuclease; Rne/Rng family                                                                                           KEGG: gsu:GSU3239 ribonuclease G                                                                                                                                     COGs: COG1530 Ribonuclease G and E                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0124    r       104877     102433     prodigal   Protein of unknown function DUF2344                                                                                    PFAM          3      nd                nd                                       nd            nd          NR top hit: radical SAM domain-containing protein [Geobacter uraniireducens Rf4] gb|ABQ24516.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]                                                                                                                 SPTR: Radical SAM domain protein;                                                                                                                                                       PFAM: Protein of unknown function DUF2344; Radical SAM domain protein                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: gur:Gura_0300 radical SAM domain-containing protein                                                                                                            COGs: COG1032 Fe-S oxidoreductase                                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0125    r       105412     104858     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: ATPase [Croceibacter atlanticus HTCC2559] gb|EAP87062.1| ATPase [Croceibacter atlanticus HTCC2559]                                                                                                                                                            SPTR: ATPase;                                                                                                                                                                           PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: cat:CA2559_13518 ATPase                                                                                                                                        nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0126    r       106428     105745     prodigal   protein of unknown function DUF481                                                                                     PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein PERMA_1693 [Persephonella marina EX-H1] gb|ACO03113.1| conserved hypothetical protein [Persephonella marina EX-H1]                                                                                                                       SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function DUF481                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1693 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0127    f       106478     107119     prodigal   signal peptidase I                                                                                                     TIGR          9      nd                nd                                       nd            nd          NR top hit: signal peptidase I [Persephonella marina EX-H1] gb|ACO04329.1| signal peptidase I [Persephonella marina EX-H1]                                                                                                                                                SPTR: Signal peptidase I;                                                                                                                                                               PFAM: Peptidase S24/S26A/S26B; conserved region; Peptidase S26; conserved region                                                                                                                                                                     TIGRFAM: signal peptidase I                                                                                                     KEGG: pmx:PERMA_0639 signal peptidase I                                                                                                                              COGs: COG0681 Signal peptidase I                                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0128    f       107152     107454     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein [Schistosoma japonicum]                                                                                                                                                                                                                  SPTR: Clone ZZD1147 mRNA sequence;                                                                                                                                                      PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: fpl:Ferp_1851 CRISPR-associated protein; Csx11 family                                                                                                          nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0129    r       107781     107482     prodigal   histone family protein DNA-binding protein                                                                             PFAM          2      nd                nd                                       nd            nd          NR top hit: histone family protein DNA-binding protein [Anaerocellum thermophilum DSM 6725] gb|ACM59772.1| histone family protein DNA-binding protein [Anaerocellum thermophilum DSM 6725]                                                                                SPTR: Histone family protein DNA-binding protein;                                                                                                                                       PFAM: histone family protein DNA-binding protein                                                                                                                                                                                                     TIGRFAM:                                                                                                                        KEGG: ate:Athe_0648 histone family protein DNA-binding protein                                                                                                       COGs: COG0776 Bacterial nucleoid DNA-binding protein                                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0130    r       108549     107962     prodigal   DivIVA domain                                                                                                          TIGR          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein SRM_00869 [Salinibacter ruber] emb|CBH23790.1| conserved hypothetical protein [Salinibacter ruber M8]                                                                                                                                    SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: DivIVA family protein                                                                                                                                                                                                                          TIGRFAM: DivIVA domain                                                                                                          KEGG: srm:SRM_00869 hypothetical protein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0131    r       108795     108553     prodigal   protein of unknown function YGGT                                                                                       PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein HG1285_13984 [Hydrogenivirga sp. 128-5-R1-1] gb|EDP74983.1| hypothetical protein HG1285_13984 [Hydrogenivirga sp. 128-5-R1-1]                                                                                                            SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function YGGT                                                                                                                                                                                                               TIGRFAM:                                                                                                                        KEGG: afr:AFE_0261 YGGT family protein                                                                                                                               nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0132    r       109388     108786     prodigal   non-canonical purine NTP pyrophosphatase; rdgB/HAM1 family                                                             TIGR          16     nd                nd                                       nd            nd          NR top hit: non-canonical purine NTP pyrophosphatase; rdgB/HAM1 family [Bacillus tusciae DSM 2912] gb|ADG05404.1| non-canonical purine NTP pyrophosphatase; rdgB/HAM1 family [Bacillus tusciae DSM 2912]                                                                  SPTR: Nucleoside-triphosphatase;                                                                                                                                                        PFAM: Ham1 family protein                                                                                                                                                                                                                            TIGRFAM: non-canonical purine NTP pyrophosphatase; rdgB/HAM1 family                                                             KEGG: bts:Btus_0641 non-canonical purine NTP pyrophosphatase; RdgB/HAM1 family                                                                                       COGs: COG0127 Xanthosine triphosphate pyrophosphatase                                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0133    r       110089     109385     prodigal   ribonuclease PH                                                                                                        TIGR          7      nd                nd                                       nd            nd          NR top hit: ribonuclease PH [Thermincola sp. JR] gb|ADG83404.1| ribonuclease PH [Thermincola sp. JR]                                                                                                                                                                      SPTR: Ribonuclease PH;                                                                                                                                                                  PFAM: 3' exoribonuclease; Exoribonuclease; phosphorolytic domain 2                                                                                                                                                                                   TIGRFAM: ribonuclease PH                                                                                                        KEGG: tjr:TherJR_2567 ribonuclease PH                                                                                                                                COGs: COG0689 RNase PH                                                                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0134    r       110864     110076     prodigal   glutamate racemase                                                                                                     TIGR          9      nd                nd                                       nd            nd          NR top hit: glutamate racemase [Thermodesulfovibrio yellowstonii DSM 11347] gb|ACI20910.1| glutamate racemase [Thermodesulfovibrio yellowstonii DSM 11347]                                                                                                                SPTR: Glutamate racemase;                                                                                                                                                               PFAM: Asp/Glu/hydantoin racemase                                                                                                                                                                                                                     TIGRFAM: glutamate racemase                                                                                                     KEGG: tye:THEYE_A1384 glutamate racemase                                                                                                                             COGs: COG0796 Glutamate racemase                                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0135    f       110933     113086     prodigal   RelA/SpoT family protein                                                                                               TIGR          15     nd                nd                                       nd            nd          NR top hit: GTP pyrophosphokinase [Persephonella marina EX-H1] gb|ACO04768.1| GTP pyrophosphokinase [Persephonella marina EX-H1]                                                                                                                                          SPTR: GTP pyrophosphokinase;                                                                                                                                                            PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain-containing protein; amino acid-binding ACT domain protein                                                                                                 TIGRFAM: RelA/SpoT family protein                                                                                               KEGG: pmx:PERMA_0614 GTP pyrophosphokinase                                                                                                                           COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0136    f       113150     113752     prodigal   ATP-dependent Clp protease; proteolytic subunit ClpP                                                                   TIGR          9      nd                nd                                       nd            nd          NR top hit: ATP-dependent Clp protease; proteolytic subunit ClpP [Sulfurihydrogenibium yellowstonense SS-5] gb|EEP61341.1| ATP-dependent Clp protease; proteolytic subunit ClpP [Sulfurihydrogenibium yellowstonense SS-5]                                                SPTR: ATP-dependent Clp protease proteolytic subunit;                                                                                                                                   PFAM: peptidase S14 ClpP                                                                                                                                                                                                                             TIGRFAM: ATP-dependent Clp protease; proteolytic subunit ClpP                                                                   KEGG: saf:SULAZ_0379 ATP-dependent Clp protease; proteolytic subunit ClpP                                                                                            COGs: COG0740 Protease subunit of ATP-dependent Clp protease                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0137    f       113754     115049     prodigal   3;4-dihydroxy-2-butanone 4-phosphate synthase                                                                          TIGR          12     nd                nd                                       nd            nd          NR top hit: 3;4-dihydroxy-2-butanone 4-phosphate synthase [Thermocrinis albus DSM 14484] gb|ADC88921.1| 3;4-dihydroxy-2-butanone 4-phosphate synthase [Thermocrinis albus DSM 14484]                                                                                      SPTR: 3;4-dihydroxy-2-butanone 4-phosphate synthase;                                                                                                                                    PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II                                                                                                                                                                            TIGRFAM: 3;4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II                                                   KEGG: tal:Thal_0286 3;4-dihydroxy-2-butanone 4-phosphate synthase                                                                                                    COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase                                                                                                                                     
tam15698  08/20/2010  Contig31    Theam_0139    r       118377     116389     prodigal   EAL domain protein                                                                                                     PFAM          15     nd                nd                                       nd            nd          NR top hit: hypothetical protein HG1285_14274 [Hydrogenivirga sp. 128-5-R1-1] gb|EDP75041.1| hypothetical protein HG1285_14274 [Hydrogenivirga sp. 128-5-R1-1]                                                                                                            SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: EAL domain protein                                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: nam:NAMH_0815 putative diguanylate cyclase/phosphodiesterase                                                                                                   COGs: COG2200 FOG: EAL domain                                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0140    f       118734     119582     prodigal   shikimate 5-dehydrogenase                                                                                              TIGR          10     nd                nd                                       nd            nd          NR top hit: shikimate 5-dehydrogenase [Persephonella marina EX-H1] gb|ACO04504.1| shikimate 5-dehydrogenase [Persephonella marina EX-H1]                                                                                                                                  SPTR: Shikimate 5-dehydrogenase;                                                                                                                                                        PFAM: Shikimate dehydrogenase substrate binding  domain protein; Shikimate/quinate 5-dehydrogenase                                                                                                                                                   TIGRFAM: shikimate 5-dehydrogenase                                                                                              KEGG: pmx:PERMA_1072 shikimate 5-dehydrogenase                                                                                                                       COGs: COG0169 Shikimate 5-dehydrogenase                                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0141    f       119575     120846     prodigal   MgtC/SapB transporter                                                                                                  PFAM          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein PERMA_0650 [Persephonella marina EX-H1] gb|ACO04446.1| putative membrane protein [Persephonella marina EX-H1]                                                                                                                            SPTR: Putative membrane protein;                                                                                                                                                        PFAM: MgtC/SapB transporter                                                                                                                                                                                                                          TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_0650 hypothetical protein                                                                                                                            COGs: COG3174 membrane protein                                                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0142    r       121136     120882     prodigal   ribosomal protein L27                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein L27 [Anaerobaculum hydrogeniformans ATCC BAA-1850] gb|EFD25072.1| ribosomal protein L27 [Anaerobaculum hydrogeniformans ATCC BAA-1850]                                                                                                      SPTR: 50S ribosomal protein L27;                                                                                                                                                        PFAM: ribosomal protein L27                                                                                                                                                                                                                          TIGRFAM: ribosomal protein L27                                                                                                  KEGG: tal:Thal_1528 ribosomal protein L27                                                                                                                            COGs: COG0211 Ribosomal protein L27                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0143    r       121470     121162     prodigal   ribosomal protein L21                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: hypothetical protein PEPMIC_00348 [Parvimonas micra ATCC 33270] gb|EDP24499.1| hypothetical protein PEPMIC_00348 [Parvimonas micra ATCC 33270]                                                                                                                SPTR: 50S ribosomal protein L21;                                                                                                                                                        PFAM: ribosomal protein L21                                                                                                                                                                                                                          TIGRFAM: ribosomal protein L21                                                                                                  KEGG: slp:Slip_0705 ribosomal protein L21                                                                                                                            COGs: COG0261 Ribosomal protein L21                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0144    f       121614     122156     prodigal   HNH endonuclease                                                                                                       PFAM          9      nd                nd                                       nd            nd          NR top hit: HNH endonuclease [Hydrogenobaculum sp. SN] gb|EFD31738.1| HNH endonuclease [Hydrogenobaculum sp. SN]                                                                                                                                                          SPTR: HNH endonuclease;                                                                                                                                                                 PFAM: HNH endonuclease                                                                                                                                                                                                                               TIGRFAM:                                                                                                                        KEGG: hya:HY04AAS1_0070 HNH endonuclease                                                                                                                             COGs: COG1403 Restriction endonuclease                                                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0145    r       123630     122164     prodigal   inosine-5'-monophosphate dehydrogenase                                                                                 TIGR          16     nd                nd                                       nd            nd          NR top hit: inosine-5'-monophosphate dehydrogenase [Deferribacter desulfuricans SSM1] dbj|BAI79963.1| inosine-5'-monophosphate dehydrogenase [Deferribacter desulfuricans SSM1]                                                                                           SPTR: Inosine-5'-monophosphate dehydrogenase;                                                                                                                                           PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein                                                                                                                                                                                 TIGRFAM: inosine-5'-monophosphate dehydrogenase                                                                                 KEGG: ddf:DEFDS_0469 inosine-5'-monophosphate dehydrogenase                                                                                                          COGs: COG0516 IMP dehydrogenase/GMP reductase                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0146    f       123700     125079     prodigal   argininosuccinate lyase                                                                                                TIGR          10     nd                nd                                       nd            nd          NR top hit: argininosuccinate lyase [Pelobacter carbinolicus DSM 2380] sp|Q3A1V0.1|ARLY_PELCD RecName: Full=Argininosuccinate lyase; Short=ASAL; AltName: Full=Arginosuccinase gb|ABA89657.1| argininosuccinate lyase [Pelobacter carbinolicus DSM 238-TRUNCATED-         SPTR: Argininosuccinate lyase;                                                                                                                                                          PFAM: fumarate lyase                                                                                                                                                                                                                                 TIGRFAM: argininosuccinate lyase                                                                                                KEGG: pca:Pcar_2418 argininosuccinate lyase                                                                                                                          COGs: COG0165 Argininosuccinate lyase                                                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0147    f       125099     125962     prodigal   Transketolase domain-containing protein                                                                                PFAM          4      nd                nd                                       nd            nd          NR top hit: transketolase domain-containing protein [Desulfotomaculum reducens MI-1] gb|ABO51577.1| transketolase subunit A [Desulfotomaculum reducens MI-1]                                                                                                              SPTR: Transketolase subunit A;                                                                                                                                                          PFAM: Transketolase domain-containing protein                                                                                                                                                                                                        TIGRFAM:                                                                                                                        KEGG: drm:Dred_3075 transketolase domain-containing protein                                                                                                          COGs: COG3959 Transketolase N-terminal subunit                                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0148    f       125976     126911     prodigal   Transketolase central region                                                                                           PFAM          4      nd                nd                                       nd            nd          NR top hit: Transketolase central region [Geobacter sp. FRC-32] gb|ACM19728.1| Transketolase central region [Geobacter sp. FRC-32]                                                                                                                                        SPTR: Transketolase central region;                                                                                                                                                     PFAM: Transketolase central region; Transketolase domain-containing protein                                                                                                                                                                          TIGRFAM:                                                                                                                        KEGG: geo:Geob_1368 transketolase central region                                                                                                                     COGs: COG3958 Transketolase C-terminal subunit                                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0149    f       126912     128219     prodigal   carboxyl-terminal protease                                                                                             TIGR          9      nd                nd                                       nd            nd          NR top hit: carboxy- peptidase [Persephonella marina EX-H1] gb|ACO03518.1| carboxy- peptidase [Persephonella marina EX-H1]                                                                                                                                                SPTR: Carboxy-peptidase;                                                                                                                                                                PFAM: peptidase S41; PDZ/DHR/GLGF domain protein                                                                                                                                                                                                     TIGRFAM: carboxyl-terminal protease                                                                                             KEGG: pmx:PERMA_0187 carboxy-peptidase                                                                                                                               COGs: COG0793 Periplasmic protease                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0150    f       128216     128839     prodigal   alpha/beta hydrolase fold                                                                                              PFAM          11     nd                nd                                       nd            nd          NR top hit: putative biotin biosynthesis protein [Hydrogenobacter thermophilus TK-6] dbj|BAI70303.1| putative biotin biosynthesis protein [Hydrogenobacter thermophilus TK-6]                                                                                             SPTR: Putative biotin biosynthesis protein;                                                                                                                                             PFAM: alpha/beta hydrolase fold                                                                                                                                                                                                                      TIGRFAM:                                                                                                                        KEGG: hth:HTH_1859 putative biotin biosynthesis protein                                                                                                              COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily)                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0151    r       129698     128730     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein CTN_0898 [Thermotoga neapolitana DSM 4359] sp|B9K7Z1.1|Y898_THENN RecName: Full=UPF0042 nucleotide-binding protein CTN_0898 gb|ACM23074.1| Hypothetical Protein CTN_0898 [Thermotoga neapolitana DSM 4359]                               SPTR: UPF0042 nucleotide-binding protein CTN_0898;                                                                                                                                      PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: tna:CTN_0898 hypothetical protein                                                                                                                              COGs: COG1660 P-loop-containing kinase                                                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0152    r       130483     129695     prodigal   ATP/GTP-binding                                                                                                        KEGG          11     nd                nd                                       nd            nd          NR top hit: periplasmic ATP/GTP-binding protein [Stappia aggregata IAM 12614] gb|EAV41669.1| periplasmic ATP/GTP-binding protein [Stappia aggregata IAM 12614]                                                                                                            SPTR: Periplasmic ATP/GTP-binding protein;                                                                                                                                              PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dfe:Dfer_2979 ATP/GTP-binding                                                                                                                                  nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0153    r       131367     130474     prodigal   NAD(+) kinase                                                                                                          PRIAM         4      nd                nd                                       nd            nd          NR top hit: putative inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase)(ppnK) [NC10 bacterium 'Dutch sediment']                                                                                                                                              SPTR: Putative inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase)(PpnK);                                                                                                   PFAM: ATP-NAD/AcoX kinase                                                                                                                                                                                                                            TIGRFAM:                                                                                                                        KEGG: geo:Geob_3461 ATP-NAD/AcoX kinase                                                                                                                              COGs: COG0061 sugar kinase                                                                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0154    r       132019     131336     prodigal   AAA ATPase                                                                                                             SMART         2      nd                nd                                       nd            nd          NR top hit: DNA replication protein DnaC [Aquifex aeolicus VF5] gb|AAC07013.1| DNA replication protein DnaC [Aquifex aeolicus VF5]                                                                                                                                        SPTR: DNA replication protein DnaC;                                                                                                                                                     PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: aae:aq_910 DNA replication protein DnaC                                                                                                                        COGs: COG1484 DNA replication protein                                                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0155    f       132080     133150     prodigal   Radical SAM domain protein                                                                                             PFAM          12     nd                nd                                       nd            nd          NR top hit: Radical SAM domain protein [bacterium S5] gb|EFC65458.1| Radical SAM domain protein [bacterium S5]                                                                                                                                                            SPTR: Radical SAM domain protein;                                                                                                                                                       PFAM: Radical SAM domain protein                                                                                                                                                                                                                     TIGRFAM:                                                                                                                        KEGG: hmo:HM1_1949 hypothetical protein                                                                                                                              COGs: COG1060 Thiamine biosynthesis protein ThiH                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0156    r       133763     133134     prodigal   type IV pilus assembly PilZ                                                                                            PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein PERMA_0736 [Persephonella marina EX-H1] gb|ACO03552.1| hypothetical protein PERMA_0736 [Persephonella marina EX-H1]                                                                                                                      SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: type IV pilus assembly PilZ                                                                                                                                                                                                                    TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_0736 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0157    r       135564     133756     prodigal   chemotaxis sensory transducer                                                                                          PFAM          9      nd                nd                                       nd            nd          NR top hit: putative methyl-accepting chemotaxis transducer [Persephonella marina EX-H1] gb|ACO04849.1| putative methyl-accepting chemotaxis transducer [Persephonella marina EX-H1]                                                                                      SPTR: Putative methyl-accepting chemotaxis transducer;                                                                                                                                  PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein                                                                                                                                                                     TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_0737 putative methyl-accepting chemotaxis transducer                                                                                                 COGs: COG0840 Methyl-accepting chemotaxis protein                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0158    f       135643     136929     prodigal   RNA methyltransferase; TrmA family                                                                                     TIGR          7      nd                nd                                       nd            nd          NR top hit: 23S rRNA (uracil-5-)-methyltransferase [Persephonella marina EX-H1] gb|ACO03273.1| 23S rRNA (uracil-5-)-methyltransferase [Persephonella marina EX-H1]                                                                                                        SPTR: 23S rRNA (Uracil-5-)-methyltransferase;                                                                                                                                           PFAM: (Uracil-5)-methyltransferase                                                                                                                                                                                                                   TIGRFAM: RNA methyltransferase; TrmA family                                                                                     KEGG: pmx:PERMA_1601 23S rRNA (uracil-5-)-methyltransferase                                                                                                          COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase                                                                                                     
tam15698  08/20/2010  Contig31    Theam_0159    f       136929     137834     prodigal   dihydroorotate dehydrogenase family protein                                                                            TIGR          16     nd                nd                                       nd            nd          NR top hit: dihydroorotate dehydrogenase 1B [Pelotomaculum thermopropionicum SI] dbj|BAF59987.1| dihydroorotate dehydrogenase [Pelotomaculum thermopropionicum SI]                                                                                                        SPTR: Dihydroorotate dehydrogenase;                                                                                                                                                     PFAM: dihydroorotate oxidase                                                                                                                                                                                                                         TIGRFAM: dihydroorotate dehydrogenase family protein                                                                            KEGG: pth:PTH_1806 dihydroorotate dehydrogenase 1B                                                                                                                   COGs: COG0167 Dihydroorotate dehydrogenase                                                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0160    r       140292     137839     prodigal   ATP-dependent DNA helicase RecG                                                                                        TIGR          2      nd                nd                                       nd            nd          NR top hit: ATP-dependent DNA helicase RecG [Aquifex aeolicus VF5] sp|O67837.1|RECG_AQUAE RecName: Full=ATP-dependent DNA helicase recG gb|AAC07804.1| ATP-dependent DNA helicase RecG [Aquifex aeolicus VF5]                                                             SPTR: ATP-dependent DNA helicase recG;                                                                                                                                                  PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein                                                                                                                                TIGRFAM: ATP-dependent DNA helicase RecG                                                                                        KEGG: aae:aq_2053 ATP-dependent DNA helicase RecG                                                                                                                    COGs: COG1200 RecG-like helicase                                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0161    f       140348     142099     prodigal   Tetratricopeptide TPR_1 repeat-containing protein                                                                      PFAM          11     nd                nd                                       nd            nd          NR top hit: tetratricopeptide repeat domain protein [Persephonella marina EX-H1] gb|ACO04542.1| tetratricopeptide repeat domain protein [Persephonella marina EX-H1]                                                                                                      SPTR: Tetratricopeptide repeat domain protein;                                                                                                                                          PFAM: Tetratricopeptide TPR_1 repeat-containing protein                                                                                                                                                                                              TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_0503 tetratricopeptide repeat domain protein                                                                                                         COGs: COG4783 Putative Zn-dependent protease contains TPR repeats                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0162    f       142096     142587     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: putative transcriptional regulator [Streptococcus mutans UA159] gb|AAN58030.1|AE014875_7 putative transcriptional regulator [Streptococcus mutans UA159] gb|ABN81023.1| AguR [Streptococcus ratti FA-1]                                                       SPTR: Putative transcriptional regulator;                                                                                                                                               PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: smu:SMU.261c putative transcriptional regulator                                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0163    f       142599     144029     prodigal   peptidase M17 leucyl aminopeptidase domain protein                                                                     PFAM          10     nd                nd                                       nd            nd          NR top hit: leucine aminopeptidase [Aquifex aeolicus VF5] sp|O67868.1|AMPA_AQUAE RecName: Full=Probable cytosol aminopeptidase; AltName: Full=Leucine aminopeptidase; Short=LAP; AltName: Full=Leucyl aminopeptidase gb|AAC07829.1| leucine amino-TRUNCATED-              SPTR: Probable cytosol aminopeptidase;                                                                                                                                                  PFAM: peptidase M17 leucyl aminopeptidase domain protein                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: aae:aq_2099 leucyl aminopeptidase                                                                                                                              COGs: COG0260 Leucyl aminopeptidase                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0164    f       144060     145349     prodigal   Cl- channel voltage-gated family protein                                                                               PFAM          9      nd                nd                                       nd            nd          NR top hit: putative chloride channel protein [Nautilia profundicola AmH] gb|ACM93212.1| putative chloride channel protein [Nautilia profundicola AmH]                                                                                                                    SPTR: Putative chloride channel protein;                                                                                                                                                PFAM: Cl- channel voltage-gated family protein                                                                                                                                                                                                       TIGRFAM:                                                                                                                        KEGG: nam:NAMH_0689 putative chloride channel protein                                                                                                                COGs: COG0038 Chloride channel protein EriC                                                                                                                                                     
tam15698  08/20/2010  Contig31    Theam_0165    f       145391     147685     prodigal   chemotaxis sensory transducer                                                                                          PFAM          9      nd                nd                                       nd            nd          NR top hit: chemotactic transducer PctA [Campylobacterales bacterium GD 1] gb|EDZ62400.1| chemotactic transducer PctA [Campylobacterales bacterium GD 1]                                                                                                                  SPTR: Chemotactic transducer PctA;                                                                                                                                                      PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein                                                                                                                                               TIGRFAM:                                                                                                                        KEGG: dap:Dacet_0889 methyl-accepting chemotaxis sensory transducer                                                                                                  COGs: COG0840 Methyl-accepting chemotaxis protein                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0166    r       149374     147704     prodigal   diguanylate cyclase                                                                                                    TIGR          15     nd                nd                                       nd            nd          NR top hit: diguanylate cyclase (GGDEF) domain protein [Nautilia profundicola AmH] gb|ACM92172.1| diguanylate cyclase (GGDEF) domain protein [Nautilia profundicola AmH]                                                                                                  SPTR: Diguanylate cyclase (GGDEF) domain protein;                                                                                                                                       PFAM: GGDEF domain containing protein                                                                                                                                                                                                                TIGRFAM: diguanylate cyclase                                                                                                    KEGG: nam:NAMH_0079 diguanylate cyclase (GGDEF) domain protein                                                                                                       COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0167    r       156139     154997     prodigal   RNA ligase; T4 RnlA-like                                                                                               PFAM          11     nd                nd                                       nd            nd          NR top hit: putative RNA ligase [Bradyrhizobium sp. ORS278] emb|CAL77340.1| putative RNA ligase [Bradyrhizobium sp. ORS278]                                                                                                                                               SPTR: Putative RNA ligase;                                                                                                                                                              PFAM: RNA ligase; T4 RnlA-like                                                                                                                                                                                                                       TIGRFAM:                                                                                                                        KEGG: bra:BRADO3560 putative RNA ligase                                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0168    r       156857     156123     prodigal   phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase                                                TIGR          10     nd                nd                                       nd            nd          NR top hit: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase [Persephonella marina EX-H1] sp|C0QRW6.1|HIS4_PERMH RecName: Full=1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methyli-TRUNCATED-                      SPTR: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase;                                                                               PFAM: histidine biosynthesis protein                                                                                                                                                                                                                 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase                                                KEGG: pmx:PERMA_1646 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imid azole-4-carboxamide isomerase                                              COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase                                                                                            
tam15698  08/20/2010  Contig31    Theam_0169    r       157325     156867     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: flagellar biosynthesis protein FlhA [Alteromonas macleodii 'Deep ecotype'] gb|ACG67169.1| flagellar biosynthesis protein [Alteromonas macleodii 'Deep ecotype']                                                                                               SPTR: Flagellar biosynthesis protein;                                                                                                                                                   PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: amc:MADE_02873 flagellar biosynthesis protein FlhA                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0170    r       158239     157328     prodigal   quinolinate synthetase complex; A subunit                                                                              TIGR          12     nd                nd                                       nd            nd          NR top hit: quinolinate synthetase [Hydrogenivirga sp. 128-5-R1-1] gb|EDP73769.1| quinolinate synthetase [Hydrogenivirga sp. 128-5-R1-1]                                                                                                                                  SPTR: Quinolinate synthetase;                                                                                                                                                           PFAM: Quinolinate synthetase A                                                                                                                                                                                                                       TIGRFAM: quinolinate synthetase complex; A subunit                                                                              KEGG: tai:Taci_1757 quinolinate synthetase complex; A subunit                                                                                                        COGs: COG0379 Quinolinate synthase                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0171    r       159798     158242     prodigal   GMP synthase; large subunit                                                                                            TIGR          16     nd                nd                                       nd            nd          NR top hit: GMP synthase [Persephonella marina EX-H1] gb|ACO03306.1| GMP synthase [Persephonella marina EX-H1]                                                                                                                                                            SPTR: GMP synthase;                                                                                                                                                                     PFAM: GMP synthase domain protein; glutamine amidotransferase class-I                                                                                                                                                                                TIGRFAM: GMP synthase; large subunit; GMP synthase; small subunit                                                               KEGG: pmx:PERMA_0029 GMP synthase                                                                                                                                    COGs: COG0519 GMP synthase PP-ATPase domain/subunit                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0172    r       159950     159858     prodigal   hypothetical protein                                                                                                   hypothetical  13     nd                nd                                       nd            nd          nd                                                                                                                                                                                                                                                                        nd                                                                                                                                                                                      PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        nd                                                                                                                                                                   nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0173    r       160670     159966     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein CD0977 [Clostridium difficile 630] emb|CAJ67818.1| hypothetical phage protein [Clostridium difficile 630]                                                                                                                                SPTR: Hypothetical phage protein;                                                                                                                                                       PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: cdf:CD0977 hypothetical protein                                                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0174    r       161013     160660     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein Bm1_28780 [Brugia malayi] gb|EDP33950.1| hypothetical protein Bm1_28780 [Brugia malayi]                                                                                                                                                  SPTR: General secretory pathway protein E;                                                                                                                                              PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: smt:Smal_0546 general secretory pathway protein E                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0175    r       161407     161006     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: PREDICTED: EF-hand calcium-binding domain-containing protein 4A-like isoform 1 [Macaca mulatta]                                                                                                                                                               SPTR: Structural maintenance of chromosome 3;                                                                                                                                           PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: mcc:700951 EF-hand calcium-binding domain-containing protein 4A-like                                                                                           nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0176    f       161425     162027     prodigal   protein of unknown function DUF152                                                                                     PFAM          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein HTH_1582 [Hydrogenobacter thermophilus TK-6] dbj|BAI70030.1| hypothetical protein [Hydrogenobacter thermophilus TK-6]                                                                                                                    SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function DUF152                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: hth:HTH_1582 hypothetical protein                                                                                                                              COGs: COG1496 conserved hypothetical protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0177    f       162027     163031     prodigal   DNA protecting protein DprA                                                                                            TIGR          2      nd                nd                                       nd            nd          NR top hit: DNA protecting protein DprA [Pelobacter propionicus DSM 2379] gb|ABK98160.1| DNA protecting protein DprA [Pelobacter propionicus DSM 2379]                                                                                                                    SPTR: DNA protecting protein DprA;                                                                                                                                                      PFAM: SMF family protein                                                                                                                                                                                                                             TIGRFAM: DNA protecting protein DprA                                                                                            KEGG: ppd:Ppro_0529 DNA protecting protein DprA                                                                                                                      COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0178    f       163025     163969     prodigal   protein of unknown function DUF185                                                                                     PFAM          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein CHY_0386 [Carboxydothermus hydrogenoformans Z-2901] gb|ABB14081.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans Z-2901]                                                                                             SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function DUF185                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: chy:CHY_0386 hypothetical protein                                                                                                                              COGs: COG1565 conserved hypothetical protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0179    r       165267     163978     prodigal   adenylosuccinate synthetase                                                                                            TIGR          16     nd                nd                                       nd            nd          NR top hit: adenylosuccinate synthetase [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN98908.1| adenylosuccinate synthetase [Sulfurihydrogenibium azorense Az-Fu1]                                                                                                          SPTR: Adenylosuccinate synthetase;                                                                                                                                                      PFAM: adenylosuccinate synthetase                                                                                                                                                                                                                    TIGRFAM: adenylosuccinate synthetase                                                                                            KEGG: saf:SULAZ_0329 adenylosuccinate synthetase                                                                                                                     COGs: COG0104 Adenylosuccinate synthase                                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0180    r       166571     165312     prodigal   histidyl-tRNA synthetase 2                                                                                             TIGR          10     nd                nd                                       nd            nd          NR top hit: histidyl-tRNA synthetase [Geobacter bemidjiensis Bem] gb|ACH37582.1| histidyl-tRNA synthetase [Geobacter bemidjiensis Bem]                                                                                                                                    SPTR: Histidyl-tRNA synthetase;                                                                                                                                                         PFAM: tRNA synthetase class II (G H P and S)                                                                                                                                                                                                         TIGRFAM: histidyl-tRNA synthetase 2                                                                                             KEGG: gbm:Gbem_0553 ATP phosphoribosyltransferase regulatory subunit                                                                                                 COGs: COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0181    r       167635     166574     prodigal   threonine synthase                                                                                                     TIGR          10     nd                nd                                       nd            nd          NR top hit: threonine synthase [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN99463.1| threonine synthase [Sulfurihydrogenibium azorense Az-Fu1]                                                                                                                            SPTR: Threonine synthase;                                                                                                                                                               PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit                                                                                                                                                                                          TIGRFAM: threonine synthase                                                                                                     KEGG: saf:SULAZ_1669 threonine synthase                                                                                                                              COGs: COG0498 Threonine synthase                                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0182    f       167716     168588     prodigal   dihydrodipicolinate synthase                                                                                           TIGR          10     nd                nd                                       nd            nd          NR top hit: dihydrodipicolinate synthase [Geobacter sp. M18] gb|EET34020.1| dihydrodipicolinate synthase [Geobacter sp. M18]                                                                                                                                              SPTR: Dihydrodipicolinate synthase;                                                                                                                                                     PFAM: dihydrodipicolinate synthetase                                                                                                                                                                                                                 TIGRFAM: dihydrodipicolinate synthase                                                                                           KEGG: gur:Gura_0234 dihydrodipicolinate synthase                                                                                                                     COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0183    f       168590     169627     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein PERMA_1519 [Persephonella marina EX-H1] gb|ACO04726.1| conserved hypothetical protein [Persephonella marina EX-H1]                                                                                                                       SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1519 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0184    f       169627     170409     prodigal   dihydrodipicolinate reductase                                                                                          TIGR          10     nd                nd                                       nd            nd          NR top hit: dihydrodipicolinate reductase [Thermodesulfovibrio yellowstonii DSM 11347] ref|YP_002249442.1| dihydrodipicolinate reductase [Thermodesulfovibrio yellowstonii DSM 11347] gb|ACI20959.1| dihydrodipicolinate reductase [Thermodesu-TRUNCATED-                 SPTR: Dihydrodipicolinate reductase;                                                                                                                                                    PFAM: dihydrodipicolinate reductase                                                                                                                                                                                                                  TIGRFAM: dihydrodipicolinate reductase                                                                                          KEGG: tye:THEYE_A1649 dihydrodipicolinate reductase                                                                                                                  COGs: COG0289 Dihydrodipicolinate reductase                                                                                                                                                     
tam15698  08/20/2010  Contig31    Theam_0185    f       170443     170859     prodigal   NIL domain                                                                                                             PFAM          11     nd                nd                                       nd            nd          NR top hit: ferridoxin [Syntrophus aciditrophicus SB] gb|ABC78171.1| ferridoxin [Syntrophus aciditrophicus SB]                                                                                                                                                            SPTR: Ferridoxin;                                                                                                                                                                       PFAM: NIL domain                                                                                                                                                                                                                                     TIGRFAM:                                                                                                                        KEGG: sat:SYN_00800 ferridoxin                                                                                                                                       nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0186    r       172998     170884     prodigal   catalase/peroxidase HPI                                                                                                TIGR          9      nd                nd                                       nd            nd          NR top hit: catalase/peroxidase [Symbiobacterium thermophilum IAM 14863] sp|Q67LP5.1|KATG_SYMTH RecName: Full=Catalase-peroxidase; Short=CP; AltName: Full=Peroxidase/catalase dbj|BAD41401.1| catalase/peroxidase [Symbiobacterium thermophilum IAM 1-TRUNCATED-         SPTR: Catalase-peroxidase;                                                                                                                                                              PFAM: Haem peroxidase                                                                                                                                                                                                                                TIGRFAM: catalase/peroxidase HPI                                                                                                KEGG: sth:STH2416 catalase/peroxidase                                                                                                                                COGs: COG0376 Catalase (peroxidase I)                                                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0187    r       175308     173101     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein CLM_0764 [Clostridium botulinum A2 str. Kyoto] gb|ACO84697.1| conserved hypothetical protein [Clostridium botulinum A2 str. Kyoto]                                                                                                       SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: cby:CLM_0764 hypothetical protein                                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0188    r       177923     175332     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein CBN_0698 [Clostridium botulinum NCTC 2916] gb|EDT83359.1| hypothetical protein CBN_0698 [Clostridium botulinum NCTC 2916]                                                                                                                SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: cby:CLM_0763 hypothetical protein                                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0189    r       178712     178005     prodigal   orotidine 5'-phosphate decarboxylase                                                                                   TIGR          16     nd                nd                                       nd            nd          NR top hit: orotidine 5'-phosphate decarboxylase [Thermincola sp. JR] gb|ADG82676.1| orotidine 5'-phosphate decarboxylase [Thermincola sp. JR]                                                                                                                            SPTR: Orotidine 5'-phosphate decarboxylase;                                                                                                                                             PFAM: Orotidine 5'-phosphate decarboxylase                                                                                                                                                                                                           TIGRFAM: orotidine 5'-phosphate decarboxylase                                                                                   KEGG: tjr:TherJR_1827 orotidine 5'-phosphate decarboxylase                                                                                                           COGs: COG0284 Orotidine-5'-phosphate decarboxylase                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0190    r       180004     178709     prodigal   homoserine dehydrogenase                                                                                               PFAM          10     nd                nd                                       nd            nd          NR top hit: homoserine dehydrogenase (HDH): ThrA; metL [Thermodesulfovibrio yellowstonii DSM 11347] gb|ACI20528.1| homoserine dehydrogenase (HDH): ThrA; metL [Thermodesulfovibrio yellowstonii DSM 11347]                                                                SPTR: Homoserine dehydrogenase;                                                                                                                                                         PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein                                                                                                                                          TIGRFAM:                                                                                                                        KEGG: tye:THEYE_A1986 homoserine dehydrogenase (HDH): ThrA; MetL                                                                                                     COGs: COG0460 Homoserine dehydrogenase                                                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0191    r       181237     180017     prodigal   aminotransferase class I and II                                                                                        PFAM          10     nd                nd                                       nd            nd          NR top hit: aminotransferase; class I and II [Syntrophobacter fumaroxidans MPOB] gb|ABK16911.1| aminotransferase [Syntrophobacter fumaroxidans MPOB]                                                                                                                      SPTR: Aminotransferase;                                                                                                                                                                 PFAM: aminotransferase class I and II                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: sfu:Sfum_1219 aminotransferase; class I and II                                                                                                                 COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase                                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0192    f       181513     182265     prodigal   periplasmic binding protein                                                                                            PFAM          9      nd                nd                                       nd            nd          NR top hit: ABC-type Fe3+-siderophores transport system; periplasmic component; putative [Thermodesulfovibrio yellowstonii DSM 11347] gb|ACI20982.1| ABC-type Fe3+-siderophores transport system; periplasmic component; putative [Thermodesul-TRUNCATED-                 SPTR: ABC-type Fe3+-siderophores transport system; periplasmic component; putative;                                                                                                     PFAM: periplasmic binding protein                                                                                                                                                                                                                    TIGRFAM:                                                                                                                        KEGG: tye:THEYE_A1173 ABC-type Fe3+-siderophores transport system; periplasmic component; putative                                                                   COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0193    f       182256     183158     prodigal   transport system permease protein                                                                                      PFAM          9      nd                nd                                       nd            nd          NR top hit: ferric ion ABC transpoter (permease) [Bacillus sp. SG-1] gb|EDL66219.1| ferric ion ABC transpoter (permease) [Bacillus sp. SG-1]                                                                                                                              SPTR: Ferric ion ABC transpoter (Permease);                                                                                                                                             PFAM: transport system permease protein                                                                                                                                                                                                              TIGRFAM:                                                                                                                        KEGG: glo:Glov_3558 transport system permease protein                                                                                                                COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component                                                                                                                     
tam15698  08/20/2010  Contig31    Theam_0194    f       183145     183849     prodigal   ABC transporter related                                                                                                PFAM          9      nd                nd                                       nd            nd          NR top hit: ferrichrome transport ATP-binding protein [Pyrococcus horikoshii OT3] dbj|BAA30335.1| 250aa long hypothetical ferrichrome transport ATP-binding protein [Pyrococcus horikoshii OT3]                                                                           SPTR: 250aa long hypothetical ferrichrome transport ATP-binding protein;                                                                                                                PFAM: ABC transporter related                                                                                                                                                                                                                        TIGRFAM:                                                                                                                        KEGG: pho:PH1235 ferrichrome transport ATP-binding protein                                                                                                           COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0195    f       183861     185684     prodigal   TonB-dependent receptor plug                                                                                           PFAM          12     nd                nd                                       nd            nd          NR top hit: TonB-dependent receptor [Chlorobaculum parvum NCIB 8327] gb|ACF11590.1| TonB-dependent receptor [Chlorobaculum parvum NCIB 8327]                                                                                                                              SPTR: TonB-dependent receptor;                                                                                                                                                          PFAM: TonB-dependent receptor plug; TonB-dependent receptor                                                                                                                                                                                          TIGRFAM:                                                                                                                        KEGG: cpc:Cpar_1184 TonB-dependent receptor                                                                                                                          COGs: COG4206 Outer membrane cobalamin receptor protein                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0196    f       185795     186565     prodigal   NAD-dependent epimerase/dehydratase                                                                                    PFAM          9      nd                nd                                       nd            nd          NR top hit: NADH dehydrogenase [Persephonella marina EX-H1] gb|ACO03593.1| NADH dehydrogenase [Persephonella marina EX-H1]                                                                                                                                                SPTR: NADH dehydrogenase;                                                                                                                                                               PFAM: NAD-dependent epimerase/dehydratase                                                                                                                                                                                                            TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1368 NADH dehydrogenase                                                                                                                              COGs: COG0451 Nucleoside-diphosphate-sugar epimerase                                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0197    f       186590     187558     prodigal   Citryl-CoA lyase                                                                                                       PRIAM         4      nd                nd                                       nd            nd          NR top hit: HpcH/HpaI aldolase [Chlorobium phaeobacteroides DSM 266] gb|ABL66199.1| HpcH/HpaI aldolase [Chlorobium phaeobacteroides DSM 266]                                                                                                                              SPTR: HpcH/HpaI aldolase;                                                                                                                                                               PFAM: HpcH/HpaI aldolase                                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: cph:Cpha266_2198 HpcH/HpaI aldolase                                                                                                                            COGs: COG2301 Citrate lyase beta subunit                                                                                                                                                        
tam15698  08/20/2010  Contig31    Theam_0198    r       188444     187533     prodigal   LysR substrate-binding                                                                                                 PFAM          6      nd                nd                                       nd            nd          NR top hit: transcriptional regulator [Thermodesulfovibrio yellowstonii DSM 11347] gb|ACI20643.1| transcriptional regulator [Thermodesulfovibrio yellowstonii DSM 11347]                                                                                                  SPTR: Transcriptional regulator;                                                                                                                                                        PFAM: LysR substrate-binding; regulatory protein LysR                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: tye:THEYE_A0898 transcriptional regulator                                                                                                                      COGs: COG0583 Transcriptional regulator                                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0199    r       188769     188446     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein bcere0026_30050 [Bacillus cereus AH603] gb|EEL70190.1| hypothetical protein bcere0026_30050 [Bacillus cereus AH603]                                                                                                                      SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: btb:BMB171_C2996 hypothetical protein                                                                                                                          nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0200    r       189458     188838     prodigal   protein of unknown function DUF309                                                                                     PFAM          11     nd                nd                                       nd            nd          NR top hit: protein of unknown function DUF309 [Geobacter bemidjiensis Bem] gb|ACH38166.1| protein of unknown function DUF309 [Geobacter bemidjiensis Bem]                                                                                                                SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function DUF309                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: gbm:Gbem_1147 protein of unknown function DUF309                                                                                                               nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0201    r       190781     189510     prodigal   3-isopropylmalate dehydratase; large subunit                                                                           TIGR          10     nd                nd                                       nd            nd          NR top hit: 3-isopropylmalate dehydratase; large subunit [Ammonifex degensii KC4] gb|ACX51397.1| 3-isopropylmalate dehydratase; large subunit [Ammonifex degensii KC4]                                                                                                    SPTR: 3-isopropylmalate dehydratase; large subunit;                                                                                                                                     PFAM: aconitate hydratase domain-containing protein                                                                                                                                                                                                  TIGRFAM: 3-isopropylmalate dehydratase; large subunit; 3-isopropylmalate dehydratase; homoaconitate hydratase family protein    KEGG: adg:Adeg_0227 3-isopropylmalate dehydratase; large subunit                                                                                                     COGs: COG0065 3-isopropylmalate dehydratase large subunit                                                                                                                                       
tam15698  08/20/2010  Contig31    Theam_0202    f       190880     191527     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: large repetitive protein [Campylobacter concisus 13826] gb|EAT97336.2| large repetitive protein [Campylobacter concisus 13826]                                                                                                                                SPTR: Large repetitive protein;                                                                                                                                                         PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: cco:CCC13826_0899 large repetitive protein                                                                                                                     nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0203    f       191524     192729     prodigal   peptidase M48 Ste24p                                                                                                   PFAM          11     nd                nd                                       nd            nd          NR top hit: peptidase; M48 family [marine gamma proteobacterium HTCC2148] gb|EEB79197.1| peptidase; M48 family [marine gamma proteobacterium HTCC2148]                                                                                                                    SPTR: Peptidase; M48 family;                                                                                                                                                            PFAM: peptidase M48 Ste24p                                                                                                                                                                                                                           TIGRFAM:                                                                                                                        KEGG: dak:DaAHT2_0695 peptidase M48 Ste24p                                                                                                                           nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0204    f       192738     194198     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: flagellar biosynthetic protein FliR [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN99117.1| flagellar biosynthetic protein FliR [Sulfurihydrogenibium azorense Az-Fu1]                                                                                          SPTR: Flagellar biosynthetic protein fliR;                                                                                                                                              PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: saf:SULAZ_1356 flagellar biosynthetic protein FliR                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0205    f       194211     194852     prodigal   nicotinate (nicotinamide) nucleotide adenylyltransferase                                                               TIGR          12     nd                nd                                       nd            nd          NR top hit: hypothetical protein HG1285_16096 [Hydrogenivirga sp. 128-5-R1-1] gb|EDP75502.1| hypothetical protein HG1285_16096 [Hydrogenivirga sp. 128-5-R1-1]                                                                                                            SPTR: Probable nicotinate-nucleotide adenylyltransferase;                                                                                                                               PFAM: cytidylyltransferase                                                                                                                                                                                                                           TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein                    KEGG: tal:Thal_0519 nicotinate (nicotinamide) nucleotide adenylyltransferase                                                                                         COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase                                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0206    f       194830     196050     prodigal   Phosphoglycerate kinase                                                                                                PRIAM         4      nd                nd                                       nd            nd          NR top hit: phosphoglycerate kinase [Dictyoglomus thermophilum H-6-12] sp|B5YE95.1|PGK_DICT6 RecName: Full=Phosphoglycerate kinase gb|ACI18291.1| phosphoglycerate kinase [Dictyoglomus thermophilum H-6-12]                                                              SPTR: Phosphoglycerate kinase;                                                                                                                                                          PFAM: phosphoglycerate kinase                                                                                                                                                                                                                        TIGRFAM:                                                                                                                        KEGG: dth:DICTH_1003 phosphoglycerate kinase                                                                                                                         COGs: COG0126 3-phosphoglycerate kinase                                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0207    r       196472     196047     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein MFS40622_1040 [Methanocaldococcus sp. FS406-22] gb|ADC69720.1| conserved hypothetical protein [Methanocaldococcus sp. FS406-22]                                                                                                          SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: mfs:MFS40622_1040 hypothetical protein                                                                                                                         nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0208    r       197232     196465     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein all7130 [Nostoc sp. PCC 7120] dbj|BAB78214.1| all7130 [Nostoc sp. PCC 7120]                                                                                                                                                              SPTR: All7130 protein;                                                                                                                                                                  PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: ana:all7130 hypothetical protein                                                                                                                               nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0209    r       197695     197303     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: RND family efflux transporter MFP subunit [Ruminococcus flavefaciens FD-1]                                                                                                                                                                                    SPTR: Lysyl-tRNA synthetase;                                                                                                                                                            PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: tva:TVAG_300870 hypothetical protein                                                                                                                           nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0210    r       199003     197801     prodigal   Peptidoglycan-binding lysin domain                                                                                     PFAM          11     nd                nd                                       nd            nd          NR top hit: prolyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] gb|EDP76434.1| prolyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]                                                                                                                                  SPTR: Prolyl-tRNA synthetase;                                                                                                                                                           PFAM: Peptidoglycan-binding lysin domain                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: bld:BLi01486 hypothetical protein                                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0211    r       200298     198982     prodigal   gid protein                                                                                                            TIGR          7      nd                nd                                       nd            nd          NR top hit: glucose-inhibited division protein A [Hydrogenivirga sp. 128-5-R1-1] gb|EDP75234.1| glucose-inhibited division protein A [Hydrogenivirga sp. 128-5-R1-1]                                                                                                      SPTR: Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO;                                                                                                              PFAM: glucose-inhibited division protein A                                                                                                                                                                                                           TIGRFAM: gid protein                                                                                                            KEGG: aae:aq_691 tRNA (uracil-5-)-methyltransferase Gid                                                                                                              COGs: COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation                                                                                                                        
tam15698  08/20/2010  Contig31    Theam_0212    f       200365     200850     prodigal   rfaE bifunctional protein                                                                                              TIGR          9      nd                nd                                       nd            nd          NR top hit: glycerol-3-phosphate cytidyltransferase [Aquifex aeolicus VF5] gb|AAC06521.1| glycerol-3-phosphate cytidyltransferase [Aquifex aeolicus VF5]                                                                                                                  SPTR: Glycerol-3-phosphate cytidyltransferase;                                                                                                                                          PFAM: cytidylyltransferase                                                                                                                                                                                                                           TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein                                                   KEGG: aae:aq_185 glycerol-3-phosphate cytidyltransferase                                                                                                             COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0213    r       202018     200792     prodigal   metal-dependent phosphohydrolase HD sub domain                                                                         PFAM          11     nd                nd                                       nd            nd          NR top hit: metal dependent phosphohydrolase [Bacillus selenitireducens MLS10] gb|ADI00698.1| metal dependent phosphohydrolase [Bacillus selenitireducens MLS10]                                                                                                          SPTR: Metal dependent phosphohydrolase;                                                                                                                                                 PFAM: metal-dependent phosphohydrolase HD sub domain                                                                                                                                                                                                 TIGRFAM:                                                                                                                        KEGG: bse:Bsel_3216 metal dependent phosphohydrolase                                                                                                                 COGs: COG1078 HD superfamily phosphohydrolase                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0214    r       202433     202005     prodigal   ferric-uptake regulator                                                                                                PFAM          9      nd                nd                                       nd            nd          NR top hit: transcriptional regulator; Fur family [Hydrogenobacter thermophilus TK-6] dbj|BAI69889.1| transcriptional regulator; Fur family [Hydrogenobacter thermophilus TK-6]                                                                                           SPTR: Transcriptional regulator; Fur family;                                                                                                                                            PFAM: ferric-uptake regulator                                                                                                                                                                                                                        TIGRFAM:                                                                                                                        KEGG: hth:HTH_1439 transcriptional regulator; Fur family                                                                                                             COGs: COG0735 Fe2+/Zn2+ uptake regulation protein                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0215    r       203451     202507     prodigal   methionyl-tRNA formyltransferase                                                                                       TIGR          7      nd                nd                                       nd            nd          NR top hit: methionyl-tRNA formyltransferase [Persephonella marina EX-H1] sp|C0QUK8.1|FMT_PERMH RecName: Full=Methionyl-tRNA formyltransferase gb|ACO03724.1| methionyl-tRNA formyltransferase [Persephonella marina EX-H1]                                               SPTR: Methionyl-tRNA formyltransferase;                                                                                                                                                 PFAM: formyl transferase domain protein                                                                                                                                                                                                              TIGRFAM: methionyl-tRNA formyltransferase                                                                                       KEGG: pmx:PERMA_0584 methionyl-tRNA formyltransferase                                                                                                                COGs: COG0223 Methionyl-tRNA formyltransferase                                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0216    r       204052     203432     prodigal   Sua5/YciO/YrdC/YwlC family protein                                                                                     TIGR          7      nd                nd                                       nd            nd          NR top hit: Sua5/YciO/YrdC/YwlC family protein [Persephonella marina EX-H1] gb|ACO04858.1| Sua5/YciO/YrdC/YwlC family protein [Persephonella marina EX-H1]                                                                                                                SPTR: Sua5/YciO/YrdC/YwlC family protein;                                                                                                                                               PFAM: SUA5/yciO/yrdC  domain                                                                                                                                                                                                                         TIGRFAM: Sua5/YciO/YrdC/YwlC family protein                                                                                     KEGG: pmx:PERMA_1686 SUA5/YciO/YrdC/YwlC family protein                                                                                                              COGs: COG0009 Putative translation factor (SUA5)                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0217    r       204938     204042     prodigal   protein of unknown function DUF89                                                                                      PFAM          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein HG1285_03028 [Hydrogenivirga sp. 128-5-R1-1] gb|EDP76546.1| hypothetical protein HG1285_03028 [Hydrogenivirga sp. 128-5-R1-1]                                                                                                            SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function DUF89                                                                                                                                                                                                              TIGRFAM:                                                                                                                        KEGG: aae:aq_893 hypothetical protein                                                                                                                                COGs: COG1578 conserved hypothetical protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0218    r       205407     204940     prodigal   phosphoribosylaminoimidazole carboxylase; catalytic subunit                                                            TIGR          16     nd                nd                                       nd            nd          NR top hit: phosphoribosylaminoimidazole carboxylase; catalytic subunit [Persephonella marina EX-H1] gb|ACO03254.1| phosphoribosylaminoimidazole carboxylase; catalytic subunit [Persephonella marina EX-H1]                                                              SPTR: Phosphoribosylaminoimidazole carboxylase; catalytic subunit;                                                                                                                      PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase                                                                                                                                                                         TIGRFAM: phosphoribosylaminoimidazole carboxylase; catalytic subunit                                                            KEGG: pmx:PERMA_0641 phosphoribosylaminoimidazole carboxylase; catalytic subunit                                                                                     COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0219    r       206275     205307     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: putative lipoprotein [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN98403.1| putative lipoprotein [Sulfurihydrogenibium azorense Az-Fu1]                                                                                                                        SPTR: Putative lipoprotein;                                                                                                                                                             PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: saf:SULAZ_0372 putative lipoprotein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0220    f       206336     206908     prodigal   translation elongation factor P                                                                                        TIGR          7      nd                nd                                       nd            nd          NR top hit: elongation factor P [Hydrogenivirga sp. 128-5-R1-1] gb|EDP75853.1| elongation factor P [Hydrogenivirga sp. 128-5-R1-1]                                                                                                                                        SPTR: Elongation factor P;                                                                                                                                                              PFAM: Elongation factor P ; Elongation factor KOW-like domain-containing protein; Elongation factor P/YeiP protein                                                                                                                                   TIGRFAM: translation elongation factor P                                                                                        KEGG: sul:SYO3AOP1_1061 elongation factor P                                                                                                                          COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0221    f       206919     207371     prodigal   acetyl-CoA carboxylase; biotin carboxyl carrier protein                                                                TIGR          5      nd                nd                                       nd            nd          NR top hit: acetyl-CoA carboxylase; biotin carboxyl carrier protein [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN99626.1| acetyl-CoA carboxylase; biotin carboxyl carrier protein [Sulfurihydrogenibium azorense Az-Fu1]                                                  SPTR: Acetyl-CoA carboxylase; biotin carboxyl carrier protein;                                                                                                                          PFAM: biotin/lipoyl attachment domain-containing protein                                                                                                                                                                                             TIGRFAM: acetyl-CoA carboxylase; biotin carboxyl carrier protein                                                                KEGG: saf:SULAZ_0421 acetyl-CoA carboxylase; biotin carboxyl carrier protein                                                                                         COGs: COG0511 Biotin carboxyl carrier protein                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0222    f       207380     208726     prodigal   acetyl-CoA carboxylase; biotin carboxylase                                                                             TIGR          5      nd                nd                                       nd            nd          NR top hit: acetyl-CoA carboxylase; biotin carboxylase subunit [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN98954.1| acetyl-CoA carboxylase; biotin carboxylase subunit [Sulfurihydrogenibium azorense Az-Fu1]                                                            SPTR: Acetyl-CoA carboxylase; biotin carboxylase subunit;                                                                                                                               PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein                                                                                                 TIGRFAM: acetyl-CoA carboxylase; biotin carboxylase                                                                             KEGG: saf:SULAZ_0507 acetyl-CoA carboxylase; biotin carboxylase subunit                                                                                              COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0223    f       208772     209242     prodigal   Like-Sm ribonucleoprotein core                                                                                         PFAM          0      nd                nd                                       nd            nd          NR top hit: RNA chaperone Hfq [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN98400.1| RNA chaperone Hfq [Sulfurihydrogenibium azorense Az-Fu1]                                                                                                                              SPTR: RNA chaperone Hfq;                                                                                                                                                                PFAM: Like-Sm ribonucleoprotein core                                                                                                                                                                                                                 TIGRFAM:                                                                                                                        KEGG: saf:SULAZ_0969 RNA chaperone Hfq                                                                                                                               nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0224    f       209249     209743     prodigal   Like-Sm ribonucleoprotein core                                                                                         PFAM          0      nd                nd                                       nd            nd          NR top hit: host factor I for bacteriophage Q beta replication [Francisella tularensis subsp. mediasiatica FSC147] sp|B2SG24.1|HFQ_FRATM RecName: Full=Protein hfq gb|ACD30683.1| host factor I for bacteriophage Q beta replication [Francisella -TRUNCATED-             SPTR: Host factor I for bacteriophage Q beta replication;                                                                                                                               PFAM: Like-Sm ribonucleoprotein core                                                                                                                                                                                                                 TIGRFAM:                                                                                                                        KEGG: fph:Fphi_1538 host factor I for bacteriophage Q beta replication                                                                                               nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0225    r       210402     209731     prodigal   transcriptional regulator domain-containing protein                                                                    PFAM          11     nd                nd                                       nd            nd          NR top hit: two-component response regulator [Nitratiruptor sp. SB155-2] dbj|BAF70396.1| two-component response regulator [Nitratiruptor sp. SB155-2]                                                                                                                     SPTR: Two-component response regulator;                                                                                                                                                 PFAM: transcriptional regulator domain-containing protein                                                                                                                                                                                            TIGRFAM:                                                                                                                        KEGG: nis:NIS_1288 two-component response regulator                                                                                                                  nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0226    f       210568     212697     prodigal   UvrD/REP helicase                                                                                                      PFAM          2      nd                nd                                       nd            nd          NR top hit: ATP-dependent DNA helicase pcra [Heliobacterium modesticaldum Ice1] gb|ABZ85536.1| ATP-dependent DNA helicase pcra [Heliobacterium modesticaldum Ice1]                                                                                                        SPTR: ATP-dependent DNA helicase pcra;                                                                                                                                                  PFAM: UvrD/REP helicase                                                                                                                                                                                                                              TIGRFAM:                                                                                                                        KEGG: hmo:HM1_3029 ATP-dependent DNA helicase PcrA                                                                                                                   COGs: COG0210 Superfamily I DNA and RNA helicase                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0227    f       212708     213853     prodigal   aminotransferase class V                                                                                               PFAM          10     nd                nd                                       nd            nd          NR top hit: serine-glyoxylate transaminase [Candidatus Nitrospira defluvii] emb|CBK43130.1| Serine-glyoxylate transaminase [Candidatus Nitrospira defluvii]                                                                                                               SPTR: Aminotransferase class V;                                                                                                                                                         PFAM: aminotransferase class V                                                                                                                                                                                                                       TIGRFAM:                                                                                                                        KEGG: nde:NIDE3444 serine-glyoxylate transaminase                                                                                                                    COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0228    f       213889     214311     prodigal   peptidylprolyl isomerase FKBP-type                                                                                     PFAM          9      nd                nd                                       nd            nd          NR top hit: fkbp-type peptidyl-prolyl cis-trans isomerase slyd [Nautilia profundicola AmH] gb|ACM92121.1| fkbp-type peptidyl-prolyl cis-trans isomerase slyd [Nautilia profundicola AmH]                                                                                  SPTR: Peptidyl-prolyl cis-trans isomerase;                                                                                                                                              PFAM: peptidylprolyl isomerase FKBP-type                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: nam:NAMH_0330 fkbp-type peptidyl-prolyl cis-trans isomerase SlyD                                                                                               COGs: COG1047 FKBP-type peptidyl-prolyl cis-trans isomerase 2                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0229    f       214312     214896     prodigal   flavin reductase domain protein FMN-binding                                                                            PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein Rfer_0945 [Rhodoferax ferrireducens T118] gb|ABD68691.1| Conserved protein/domain typically associated with flavoprotein oxygenases DIM6/NTAB family-like [Rhodoferax ferrireducens T118]                                                SPTR: Conserved protein/domain typically associated with flavoprotein oxygenases DIM6/NTAB family-like;                                                                                 PFAM: flavin reductase domain protein FMN-binding                                                                                                                                                                                                    TIGRFAM:                                                                                                                        KEGG: rfr:Rfer_0945 hypothetical protein                                                                                                                             COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family                                                                                        
tam15698  08/20/2010  Contig31    Theam_0230    r       216570     215083     prodigal   UbiD family decarboxylase                                                                                              TIGR          12     nd                nd                                       nd            nd          NR top hit: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [Deferribacter desulfuricans SSM1] dbj|BAI81098.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [Deferribacter desulfuricans SSM1]                                                                     SPTR: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD;                                                                                                                                PFAM: Carboxylyase-related protein                                                                                                                                                                                                                   TIGRFAM: UbiD family decarboxylase                                                                                              KEGG: ddf:DEFDS_1642 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD                                                                                               COGs: COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0231    f       216624     217412     prodigal   protein of unknown function DUF34                                                                                      PFAM          13     nd                nd                                       nd            nd          NR top hit: putative NIF3 family protein family protein [Selenomonas sputigena ATCC 35185] gb|EEX77957.1| putative NIF3 family protein family protein [Selenomonas sputigena ATCC 35185]                                                                                  SPTR: Putative NIF3 family protein family protein;                                                                                                                                      PFAM: protein of unknown function DUF34                                                                                                                                                                                                              TIGRFAM:                                                                                                                        KEGG: sfu:Sfum_1210 hypothetical protein                                                                                                                             COGs: COG0327 conserved hypothetical protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0232    f       217399     218115     prodigal   protein of unknown function DUF164                                                                                     PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein aq_1223 [Aquifex aeolicus VF5] gb|AAC07236.1| putative protein [Aquifex aeolicus VF5]                                                                                                                                                    SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function DUF164                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: aae:aq_1223 hypothetical protein                                                                                                                               COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0233    r       220573     218138     prodigal   ATP-dependent protease La                                                                                              TIGR          9      nd                nd                                       nd            nd          NR top hit: ATP-dependent protease La [Persephonella marina EX-H1] gb|ACO04234.1| ATP-dependent protease La [Persephonella marina EX-H1]                                                                                                                                  SPTR: ATP-dependent protease La;                                                                                                                                                        PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein                                                                                                                                                                            TIGRFAM: ATP-dependent protease La                                                                                              KEGG: pmx:PERMA_1161 ATP-dependent protease La                                                                                                                       COGs: COG0466 ATP-dependent Lon protease                                                                                                                                                        
tam15698  08/20/2010  Contig31    Theam_0234    r       221444     220545     prodigal   UTP-glucose-1-phosphate uridylyltransferase                                                                            TIGR          9      nd                nd                                       nd            nd          NR top hit: UTP--glucose-1-phosphate uridylyltransferase [Clostridium ljungdahlii ATCC 49587] gb|ADK16464.1| UTP--glucose-1-phosphate uridylyltransferase [Clostridium ljungdahlii DSM 13528]                                                                             SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: Nucleotidyl transferase                                                                                                                                                                                                                        TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase                                                                            KEGG: clj:CLJU_c34190 UTP--glucose-1-phosphate uridylyltransferase                                                                                                   COGs: COG1210 UDP-glucose pyrophosphorylase                                                                                                                                                     
tam15698  08/20/2010  Contig31    Theam_0235    r       222672     221473     prodigal   protein of unknown function Met10                                                                                      PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein aq_2071 [Aquifex aeolicus VF5] gb|AAC07819.1| hypothetical protein aq_2071 [Aquifex aeolicus VF5]                                                                                                                                        SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function Met10                                                                                                                                                                                                              TIGRFAM:                                                                                                                        KEGG: aae:aq_2071 hypothetical protein                                                                                                                               COGs: COG1092 SAM-dependent methyltransferase                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0236    r       223791     222676     prodigal   geranylgeranyl reductase                                                                                               TIGR          3      nd                nd                                       nd            nd          NR top hit: geranylgeranyl reductase family protein [Candidatus Nitrospira defluvii] emb|CBK40618.1| Geranylgeranyl reductase family protein [Candidatus Nitrospira defluvii]                                                                                             SPTR: Dehydrogenases;                                                                                                                                                                   PFAM: FAD dependent oxidoreductase                                                                                                                                                                                                                   TIGRFAM: geranylgeranyl reductase                                                                                               KEGG: nde:NIDE0852 geranylgeranyl reductase family protein                                                                                                           COGs: COG0644 Dehydrogenase (flavoprotein)                                                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0237    r       224935     223796     prodigal   carbamoyl-phosphate synthase; small subunit                                                                            TIGR          10     nd                nd                                       nd            nd          NR top hit: carbamoyl phosphate synthase small subunit [Aquifex aeolicus VF5] sp|O66727.1|CARA_AQUAE RecName: Full=Carbamoyl-phosphate synthase small chain; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain gb|AAC06674.1| carbamoyl pho-TRUNCATED-         SPTR: Carbamoyl-phosphate synthase small chain;                                                                                                                                         PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I                                                                                                                                                                   TIGRFAM: carbamoyl-phosphate synthase; small subunit                                                                            KEGG: aae:aq_410 carbamoyl phosphate synthase small subunit                                                                                                          COGs: COG0505 Carbamoylphosphate synthase small subunit                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0238    f       225029     225868     prodigal   periplasmic solute binding protein                                                                                     PFAM          9      nd                nd                                       nd            nd          NR top hit: ABC-type metal ion transport system periplasmic component/surface adhesin [Hydrogenobacter thermophilus TK-6] dbj|BAI68513.1| ABC-type metal ion transport system periplasmic component/surface adhesin [Hydrogenobacter thermophi-TRUNCATED-                 SPTR: ABC-type metal ion transport system periplasmic component/surface adhesin;                                                                                                        PFAM: periplasmic solute binding protein                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: hth:HTH_0046 ABC-type metal ion transport system periplasmic component/surface adhesin                                                                         COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0239    f       225865     226434     prodigal   glutamine amidotransferase of anthranilate synthase                                                                    TIGR          10     nd                nd                                       nd            nd          NR top hit: glutamine amidotransferase of anthranilate synthase [Geobacter sp. M18] gb|EET35888.1| glutamine amidotransferase of anthranilate synthase [Geobacter sp. M18]                                                                                                SPTR: Glutamine amidotransferase of anthranilate synthase;                                                                                                                              PFAM: glutamine amidotransferase class-I                                                                                                                                                                                                             TIGRFAM: glutamine amidotransferase of anthranilate synthase                                                                    KEGG: ppd:Ppro_1581 anthranilate synthase component II                                                                                                               COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0240    f       226431     227525     prodigal   lipid-A-disaccharide synthase                                                                                          TIGR          9      nd                nd                                       nd            nd          NR top hit: lipid-A-disaccharide synthase [Thermosinus carboxydivorans Nor1] gb|EAX46456.1| lipid-A-disaccharide synthase [Thermosinus carboxydivorans Nor1]                                                                                                              SPTR: Lipid-A-disaccharide synthase;                                                                                                                                                    PFAM: glycosyl transferase family 19                                                                                                                                                                                                                 TIGRFAM: lipid-A-disaccharide synthase                                                                                          KEGG: dak:DaAHT2_0811 lipid-A-disaccharide synthase                                                                                                                  COGs: COG0763 Lipid A disaccharide synthetase                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0241    f       227522     228616     prodigal   rRNA (guanine-N(2)-)-methyltransferase                                                                                 PRIAM         2      nd                nd                                       nd            nd          NR top hit: N6-adenine-specific DNA methylase [Pelobacter carbinolicus DSM 2380] gb|ABA89495.1| predicted N6-adenine-specific DNA methylase [Pelobacter carbinolicus DSM 2380]                                                                                            SPTR: Predicted N6-adenine-specific DNA methylase;                                                                                                                                      PFAM: RNA methylase                                                                                                                                                                                                                                  TIGRFAM:                                                                                                                        KEGG: pca:Pcar_2256 N6-adenine-specific DNA methylase                                                                                                                COGs: COG0116 N6-adenine-specific DNA methylase                                                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0242    f       228658     229780     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: RecName: Full=Peptide chain release factor 2; Short=RF-2                                                                                                                                                                                                      SPTR: Peptide chain release factor 2;                                                                                                                                                   PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: zma:100279216 hypothetical protein LOC100279216                                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0243    f       229773     230075     prodigal   CRISPR-associated protein; Csx3 family                                                                                 TIGR          11     nd                nd                                       nd            nd          NR top hit: CRISPR-associated protein; Csx3 family [Microcoleus chthonoplastes PCC 7420] gb|EDX72821.1| CRISPR-associated protein; Csx3 family [Microcoleus chthonoplastes PCC 7420]                                                                                      SPTR: CRISPR-associated protein; Csx3 family;                                                                                                                                           PFAM: CRISPR-associated protein Csx3                                                                                                                                                                                                                 TIGRFAM: CRISPR-associated protein; Csx3 family                                                                                 KEGG: aae:aq_377 hypothetical protein                                                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0244    f       230072     231022     prodigal   dihydrouridine synthase DuS                                                                                            PFAM          7      nd                nd                                       nd            nd          NR top hit: hypothetical protein aq_1598 [Aquifex aeolicus VF5] sp|O67533.1|DUS_AQUAE RecName: Full=Probable tRNA-dihydrouridine synthase gb|AAC07506.1| hypothetical protein aq_1598 [Aquifex aeolicus VF5]                                                              SPTR: Probable tRNA-dihydrouridine synthase;                                                                                                                                            PFAM: dihydrouridine synthase DuS                                                                                                                                                                                                                    TIGRFAM:                                                                                                                        KEGG: aae:aq_1598 hypothetical protein                                                                                                                               COGs: COG0042 tRNA-dihydrouridine synthase                                                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0245    f       231101     231370     prodigal   ribosomal protein S15                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: 30S ribosomal protein S15 [Deferribacter desulfuricans SSM1] dbj|BAI80981.1| 30S ribosomal protein S15 [Deferribacter desulfuricans SSM1]                                                                                                                     SPTR: 30S ribosomal protein S15;                                                                                                                                                        PFAM: ribosomal protein S15                                                                                                                                                                                                                          TIGRFAM: ribosomal protein S15                                                                                                  KEGG: ddf:DEFDS_1521 30S ribosomal protein S15                                                                                                                       COGs: COG0184 Ribosomal protein S15P/S13E                                                                                                                                                       
tam15698  08/20/2010  Contig31    Theam_0246    f       231496     233640     prodigal   polyribonucleotide nucleotidyltransferase                                                                              TIGR          7      nd                nd                                       nd            nd          NR top hit: polynucleotide phosphorylase/polyadenylase [Sulfurihydrogenibium azorense Az-Fu1] sp|C1DTW6.1|PNP_SULAA RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase gb|ACN99-TRUNCATED-                 SPTR: Polyribonucleotide nucleotidyltransferase;                                                                                                                                        PFAM: 3' exoribonuclease; Exoribonuclease; phosphorolytic domain 2; Polynucleotide phosphorylase; phosphorolytic RNA-binding; K Homology; type 1; subgroup; RNA binding S1 domain protein                                                            TIGRFAM: polyribonucleotide nucleotidyltransferase                                                                              KEGG: saf:SULAZ_0563 polynucleotide phosphorylase/polyadenylase                                                                                                      COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0247    f       233633     234487     prodigal   deoxyUTP pyrophosphatase                                                                                               PFAM          16     nd                nd                                       nd            nd          NR top hit: deoxyuridine 5'-triphosphate nucleotidohydrolase family [Microscilla marina ATCC 23134] gb|EAY27787.1| deoxyuridine 5'-triphosphate nucleotidohydrolase family [Microscilla marina ATCC 23134]                                                                SPTR: Deoxyuridine 5'-triphosphate nucleotidohydrolase family;                                                                                                                          PFAM: deoxyUTP pyrophosphatase                                                                                                                                                                                                                       TIGRFAM:                                                                                                                        KEGG: tva:TVAG_379830 deoxyuridine 5'-triphosphate nucleotidohydrolase family protein                                                                                COGs: COG0756 dUTPase                                                                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0248    f       234542     235237     prodigal   Rhomboid family protein                                                                                                PFAM          11     nd                nd                                       nd            nd          NR top hit: Rhomboid family protein [Sphaerobacter thermophilus DSM 20745] gb|ACZ39212.1| Rhomboid family protein [Sphaerobacter thermophilus DSM 20745]                                                                                                                  SPTR: Rhomboid family protein;                                                                                                                                                          PFAM: Rhomboid family protein                                                                                                                                                                                                                        TIGRFAM:                                                                                                                        KEGG: sti:Sthe_1778 rhomboid family protein                                                                                                                          COGs: COG0705 membrane protein                                                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0249    r       236302     235217     prodigal   AAA ATPase central domain protein                                                                                      PFAM          11     nd                nd                                       nd            nd          NR top hit: 26S proteasome AAA-ATPase subunit RPT4a (ISS) [Ostreococcus tauri]                                                                                                                                                                                            SPTR: 26S proteasome AAA-ATPase subunit RPT4a (ISS);                                                                                                                                    PFAM: AAA ATPase central domain protein                                                                                                                                                                                                              TIGRFAM:                                                                                                                        KEGG: sto:ST2584 cell division control protein                                                                                                                       nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0250    f       236451     237986     prodigal   2-isopropylmalate synthase                                                                                             TIGR          10     nd                nd                                       nd            nd          NR top hit: 2-isopropylmalate synthase [Aquifex aeolicus VF5] gb|AAC07824.1| 2-isopropylmalate synthase [Aquifex aeolicus VF5]                                                                                                                                            SPTR: 2-isopropylmalate synthase;                                                                                                                                                       PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein                                                                                                                                                         TIGRFAM: 2-isopropylmalate synthase                                                                                             KEGG: aae:aq_2090 2-isopropylmalate synthase                                                                                                                         COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0251    f       238147     238578     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: cyclic nucleotide-binding domain containing protein [Tetrahymena thermophila] gb|EAR90609.1| cyclic nucleotide-binding domain containing protein [Tetrahymena thermophila SB210]                                                                              SPTR: Cyclic nucleotide-binding domain containing protein;                                                                                                                              PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: tet:TTHERM_00123570 cyclic nucleotide-binding domain containing protein                                                                                        nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0252    f       238648     239028     prodigal   ribosomal protein S12                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: 30S ribosomal protein S12 [Thermotoga neapolitana DSM 4359] gb|ACM23164.1| 30S ribosomal protein S12 [Thermotoga neapolitana DSM 4359]                                                                                                                        SPTR: 30S ribosomal protein S12;                                                                                                                                                        PFAM: ribosomal protein S12/S23                                                                                                                                                                                                                      TIGRFAM: ribosomal protein S12                                                                                                  KEGG: tna:CTN_0988 30S ribosomal protein S12                                                                                                                         COGs: COG0048 Ribosomal protein S12                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0253    f       239045     239515     prodigal   ribosomal protein S7                                                                                                   TIGR          7      nd                nd                                       nd            nd          NR top hit: 30S ribosomal protein S7 [Hydrogenivirga sp. 128-5-R1-1] gb|EDP73047.1| 30S ribosomal protein S7 [Hydrogenivirga sp. 128-5-R1-1]                                                                                                                              SPTR: 30S ribosomal protein S7;                                                                                                                                                         PFAM: ribosomal protein S7                                                                                                                                                                                                                           TIGRFAM: ribosomal protein S7                                                                                                   KEGG: sul:SYO3AOP1_0295 30S ribosomal protein S7                                                                                                                     COGs: COG0049 Ribosomal protein S7                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0254    f       239539     241641     prodigal   translation elongation factor G                                                                                        TIGR          7      nd                nd                                       nd            nd          NR top hit: elongation factor G [Geobacter sulfurreducens PCA] sp|Q748Y8.1|EFG2_GEOSL RecName: Full=Elongation factor G 2; Short=EF-G 2 gb|AAR36253.1| translation elongation factor G [Geobacter sulfurreducens PCA] gb|ADI85614.1| Translation elongation-TRUNCATED-    SPTR: Translation elongation factor G;                                                                                                                                                  PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein                                                                                      TIGRFAM: translation elongation factor G; small GTP-binding protein                                                             KEGG: gsu:GSU2860 elongation factor G                                                                                                                                COGs: COG0480 Translation elongation factors (GTPase)                                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0255    f       241771     242967     prodigal   translation elongation factor Tu                                                                                       TIGR          7      nd                nd                                       nd            nd          NR top hit: translation elongation factor Tu [Syntrophothermus lipocalidus DSM 12680] gb|ADI02980.1| translation elongation factor Tu [Syntrophothermus lipocalidus DSM 12680]                                                                                            SPTR: Translation elongation factor Tu;                                                                                                                                                 PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein                                                                                                                    TIGRFAM: translation elongation factor Tu; small GTP-binding protein                                                            KEGG: slp:Slip_2239 translation elongation factor Tu                                                                                                                 COGs: COG0050 GTPase - translation elongation factors                                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0256    f       242988     243299     prodigal   ribosomal protein S10                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: 30S ribosomal protein S10 [Persephonella marina EX-H1] sp|C0QQM2.1|RS10_PERMH RecName: Full=30S ribosomal protein S10 gb|ACO04412.1| ribosomal protein S10 [Persephonella marina EX-H1]                                                                       SPTR: 30S ribosomal protein S10;                                                                                                                                                        PFAM: ribosomal protein S10                                                                                                                                                                                                                          TIGRFAM: ribosomal protein S10                                                                                                  KEGG: pmx:PERMA_1195 30S ribosomal protein S10                                                                                                                       COGs: COG0051 Ribosomal protein S10                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0257    f       243315     243938     prodigal   50S ribosomal protein L3                                                                                               TIGR          7      nd                nd                                       nd            nd          NR top hit: 50S ribosomal protein L3 [Pelotomaculum thermopropionicum SI] sp|A5D5J0.1|RL3_PELTS RecName: Full=50S ribosomal protein L3 dbj|BAF58501.1| ribosomal protein L3 [Pelotomaculum thermopropionicum SI]                                                          SPTR: 50S ribosomal protein L3;                                                                                                                                                         PFAM: ribosomal protein L3                                                                                                                                                                                                                           TIGRFAM: 50S ribosomal protein L3                                                                                               KEGG: pth:PTH_0320 50S ribosomal protein L3                                                                                                                          COGs: COG0087 Ribosomal protein L3                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0258    f       243949     244575     prodigal   ribosomal protein L4/L1e                                                                                               PFAM          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein; L4/L1 family [Persephonella marina EX-H1] gb|ACO03234.1| ribosomal protein; L4/L1 family [Persephonella marina EX-H1]                                                                                                                      SPTR: 50S ribosomal protein L4;                                                                                                                                                         PFAM: ribosomal protein L4/L1e                                                                                                                                                                                                                       TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1197 ribosomal protein; L4/L1 family                                                                                                                 COGs: COG0088 Ribosomal protein L4                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0259    f       244572     244895     prodigal   Ribosomal protein L25/L23                                                                                              PFAM          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein L23 [Aquifex aeolicus VF5] sp|O66433.1|RL23_AQUAE RecName: Full=50S ribosomal protein L23 gb|AAC06397.1| ribosomal protein L23 [Aquifex aeolicus VF5]                                                                                       SPTR: 50S ribosomal protein L23;                                                                                                                                                        PFAM: Ribosomal protein L25/L23                                                                                                                                                                                                                      TIGRFAM:                                                                                                                        KEGG: aae:aq_012 50S ribosomal protein L23                                                                                                                           COGs: COG0089 Ribosomal protein L23                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0260    f       244911     245738     prodigal   ribosomal protein L2                                                                                                   TIGR          7      nd                nd                                       nd            nd          NR top hit: 50S ribosomal protein L2 [Persephonella marina EX-H1] sp|C0QQM6.1|RL2_PERMH RecName: Full=50S ribosomal protein L2 gb|ACO04888.1| ribosomal protein L2 [Persephonella marina EX-H1]                                                                           SPTR: 50S ribosomal protein L2;                                                                                                                                                         PFAM: ribosomal protein L2                                                                                                                                                                                                                           TIGRFAM: ribosomal protein L2                                                                                                   KEGG: pmx:PERMA_1199 50S ribosomal protein L2                                                                                                                        COGs: COG0090 Ribosomal protein L2                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0261    f       245748     246026     prodigal   ribosomal protein S19                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein S19 [Rhodothermus marinus DSM 4252] gb|ACY47743.1| ribosomal protein S19 [Rhodothermus marinus DSM 4252]                                                                                                                                    SPTR: 30S ribosomal protein S19;                                                                                                                                                        PFAM: ribosomal protein S19/S15                                                                                                                                                                                                                      TIGRFAM: ribosomal protein S19                                                                                                  KEGG: rmr:Rmar_0846 ribosomal protein S19                                                                                                                            COGs: COG0185 Ribosomal protein S19                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0262    f       246040     246438     prodigal   ribosomal protein L22                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein L22 [Ammonifex degensii KC4] gb|ACX52614.1| ribosomal protein L22 [Ammonifex degensii KC4]                                                                                                                                                  SPTR: 50S ribosomal protein L22;                                                                                                                                                        PFAM: ribosomal protein L22/L17                                                                                                                                                                                                                      TIGRFAM: ribosomal protein L22                                                                                                  KEGG: adg:Adeg_1519 ribosomal protein L22                                                                                                                            COGs: COG0091 Ribosomal protein L22                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0263    f       246458     247156     prodigal   ribosomal protein S3                                                                                                   TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein S3 [Persephonella marina EX-H1] sp|C0QQM9.1|RS3_PERMH RecName: Full=30S ribosomal protein S3 gb|ACO04636.1| ribosomal protein S3 [Persephonella marina EX-H1]                                                                               SPTR: 30S ribosomal protein S3;                                                                                                                                                         PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3  domain; KH type 2 domain protein                                                                                                                                                   TIGRFAM: ribosomal protein S3                                                                                                   KEGG: pmx:PERMA_1202 ribosomal protein S3                                                                                                                            COGs: COG0092 Ribosomal protein S3                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0264    f       247159     247587     prodigal   ribosomal protein L16                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein L16 [Anaerocellum thermophilum DSM 6725] sp|B9MKH4.1|RL16_ANATD RecName: Full=50S ribosomal protein L16 gb|ACM60832.1| ribosomal protein L16 [Anaerocellum thermophilum DSM 6725]                                                           SPTR: 50S ribosomal protein L16;                                                                                                                                                        PFAM: Ribosomal protein L10e/L16                                                                                                                                                                                                                     TIGRFAM: ribosomal protein L16                                                                                                  KEGG: ate:Athe_1738 50S ribosomal protein L16                                                                                                                        COGs: COG0197 Ribosomal protein L16/L10E                                                                                                                                                        
tam15698  08/20/2010  Contig31    Theam_0265    f       247591     247791     prodigal   ribosomal protein L29                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein L29 [Thermincola sp. JR] gb|ADG81190.1| ribosomal protein L29 [Thermincola sp. JR]                                                                                                                                                          SPTR: Ribosomal protein L29;                                                                                                                                                            PFAM: ribosomal protein L29                                                                                                                                                                                                                          TIGRFAM: ribosomal protein L29                                                                                                  KEGG: tjr:TherJR_0304 ribosomal protein L29                                                                                                                          nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0266    f       247803     248096     prodigal   30S ribosomal protein S17                                                                                              TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein S17 [Thermanaerovibrio acidaminovorans DSM 6589] gb|ACZ19407.1| ribosomal protein S17 [Thermanaerovibrio acidaminovorans DSM 6589]                                                                                                          SPTR: 30S ribosomal protein S17;                                                                                                                                                        PFAM: ribosomal protein S17                                                                                                                                                                                                                          TIGRFAM: 30S ribosomal protein S17                                                                                              KEGG: tai:Taci_1175 ribosomal protein S17                                                                                                                            COGs: COG0186 Ribosomal protein S17                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0267    f       248120     248488     prodigal   ribosomal protein L14                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein L14 [Carboxydothermus hydrogenoformans Z-2901] sp|Q3A9S6.1|RL14_CARHZ RecName: Full=50S ribosomal protein L14 gb|ABB13864.1| ribosomal protein L14 [Carboxydothermus hydrogenoformans Z-2901]                                               SPTR: 50S ribosomal protein L14;                                                                                                                                                        PFAM: ribosomal protein L14b/L23e                                                                                                                                                                                                                    TIGRFAM: ribosomal protein L14                                                                                                  KEGG: chy:CHY_2299 50S ribosomal protein L14                                                                                                                         COGs: COG0093 Ribosomal protein L14                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0268    f       248501     248857     prodigal   ribosomal protein L24                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein L24 [Alicyclobacillus acidocaldarius LAA1] ref|YP_003186093.1| ribosomal protein L24 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gb|EED07167.1| ribosomal protein L24 [Alicyclobacillus acidocalda-TRUNCATED-           SPTR: 50S ribosomal protein L24;                                                                                                                                                        PFAM: KOW domain protein                                                                                                                                                                                                                             TIGRFAM: ribosomal protein L24                                                                                                  KEGG: aac:Aaci_2700 50S ribosomal protein L24                                                                                                                        COGs: COG0198 Ribosomal protein L24                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0269    f       248876     249433     prodigal   50S ribosomal protein L5                                                                                               KEGG          7      nd                nd                                       nd            nd          NR top hit: 50S ribosomal protein L5 [Persephonella marina EX-H1] gb|ACO03032.1| 50S ribosomal protein L5 (BL6) [Persephonella marina EX-H1]                                                                                                                              SPTR: 50S ribosomal protein L5;                                                                                                                                                         PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1208 50S ribosomal protein L5                                                                                                                        COGs: COG0094 Ribosomal protein L5                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0270    f       249452     249637     prodigal   ribosomal protein S14                                                                                                  PFAM          7      nd                nd                                       nd            nd          NR top hit: 30S ribosomal protein S14 [Carboxydothermus hydrogenoformans Z-2901] sp|Q3A9S9.1|RS14Z_CARHZ RecName: Full=30S ribosomal protein S14 type Z gb|ABB14597.1| ribosomal protein S14 [Carboxydothermus hydrogenoformans Z-2901]                                   SPTR: 30S ribosomal protein S14 type Z;                                                                                                                                                 PFAM: ribosomal protein S14                                                                                                                                                                                                                          TIGRFAM:                                                                                                                        KEGG: chy:CHY_2296 30S ribosomal protein S14                                                                                                                         COGs: COG0199 Ribosomal protein S14                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0271    f       249664     250086     prodigal   ribosomal protein S8                                                                                                   PFAM          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein S8 [Ammonifex degensii KC4] gb|ACX52605.1| ribosomal protein S8 [Ammonifex degensii KC4]                                                                                                                                                    SPTR: Ribosomal protein S8;                                                                                                                                                             PFAM: ribosomal protein S8                                                                                                                                                                                                                           TIGRFAM:                                                                                                                        KEGG: adg:Adeg_1510 ribosomal protein S8                                                                                                                             COGs: COG0096 Ribosomal protein S8                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0272    f       250112     250654     prodigal   ribosomal protein L6                                                                                                   TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein L6 [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN98224.1| ribosomal protein L6 [Sulfurihydrogenibium azorense Az-Fu1]                                                                                                                        SPTR: Ribosomal protein L6;                                                                                                                                                             PFAM: Ribosomal protein L6; alpha-beta domain                                                                                                                                                                                                        TIGRFAM: ribosomal protein L6                                                                                                   KEGG: saf:SULAZ_1740 ribosomal protein L6                                                                                                                            COGs: COG0097 Ribosomal protein L6P/L9E                                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0273    f       250673     251038     prodigal   ribosomal protein L18                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: 50S ribosomal protein L18 [Thermotoga neapolitana DSM 4359] sp|B9K8A2.1|RL18_THENN RecName: Full=50S ribosomal protein L18 gb|ACM23185.1| 50S ribosomal protein L18 [Thermotoga neapolitana DSM 4359]                                                         SPTR: 50S ribosomal protein L18;                                                                                                                                                        PFAM: ribosomal protein L18P/L5E                                                                                                                                                                                                                     TIGRFAM: ribosomal protein L18                                                                                                  KEGG: tna:CTN_1009 50S ribosomal protein L18                                                                                                                         COGs: COG0256 Ribosomal protein L18                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0274    f       251048     251605     prodigal   ribosomal protein S5                                                                                                   TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein S5 [Halothermothrix orenii H 168] gb|ACL68895.1| ribosomal protein S5 [Halothermothrix orenii H 168]                                                                                                                                        SPTR: Ribosomal protein S5;                                                                                                                                                             PFAM: Ribosomal protein S5 ; ribosomal protein S5 domain protein                                                                                                                                                                                     TIGRFAM: ribosomal protein S5                                                                                                   KEGG: hor:Hore_01340 ribosomal protein S5                                                                                                                            COGs: COG0098 Ribosomal protein S5                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0275    f       251608     251793     prodigal   ribosomal protein L30                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein L30 [Megasphaera genomosp. type_1 str. 28L] gb|EFD94293.1| ribosomal protein L30 [Megasphaera genomosp. type_1 str. 28L]                                                                                                                    SPTR: 50S ribosomal protein L30;                                                                                                                                                        PFAM: ribosomal protein L30                                                                                                                                                                                                                          TIGRFAM: ribosomal protein L30                                                                                                  KEGG: vpr:Vpar_1476 ribosomal protein L30                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0276    f       251795     252253     prodigal   ribosomal protein L15                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein L15 [Thermoanaerobacter tengcongensis MB4] sp|Q8R7X2.1|RL15_THETN RecName: Full=50S ribosomal protein L15 gb|AAM25417.1| Ribosomal protein L15 [Thermoanaerobacter tengcongensis MB4]                                                       SPTR: 50S ribosomal protein L15;                                                                                                                                                        PFAM:                                                                                                                                                                                                                                                TIGRFAM: ribosomal protein L15                                                                                                  KEGG: tte:TTE2273 ribosomal protein L15                                                                                                                              COGs: COG0200 Ribosomal protein L15                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0277    f       252265     253599     prodigal   preprotein translocase; SecY subunit                                                                                   TIGR          9      nd                nd                                       nd            nd          NR top hit: preprotein translocase SecY [Hydrogenivirga sp. 128-5-R1-1] gb|EDP74973.1| preprotein translocase SecY [Hydrogenivirga sp. 128-5-R1-1]                                                                                                                        SPTR: Preprotein translocase subunit secY;                                                                                                                                              PFAM: SecY protein                                                                                                                                                                                                                                   TIGRFAM: preprotein translocase; SecY subunit                                                                                   KEGG: gsu:GSU2837 preprotein translocase subunit SecY                                                                                                                COGs: COG0201 Preprotein translocase subunit SecY                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0278    f       253596     254159     prodigal   adenylate kinase                                                                                                       TIGR          16     nd                nd                                       nd            nd          NR top hit: Adenylate kinase [Saccharomonospora viridis DSM 43017] gb|ACU95496.1| Adenylate kinase [Saccharomonospora viridis DSM 43017]                                                                                                                                  SPTR: Adenylate kinase;                                                                                                                                                                 PFAM: adenylate kinase                                                                                                                                                                                                                               TIGRFAM: adenylate kinase                                                                                                       KEGG: svi:Svir_04190 adenylate kinase                                                                                                                                COGs: COG0563 Adenylate kinase and related kinase                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0279    f       254162     254932     prodigal   methionine aminopeptidase; type I                                                                                      TIGR          7      nd                nd                                       nd            nd          NR top hit: methionine aminopeptidase; type I [Desulfovibrio vulgaris str. 'Miyazaki F'] gb|ACL07061.1| methionine aminopeptidase; type I [Desulfovibrio vulgaris str. 'Miyazaki F']                                                                                      SPTR: Methionine aminopeptidase;                                                                                                                                                        PFAM: peptidase M24                                                                                                                                                                                                                                  TIGRFAM: methionine aminopeptidase; type I                                                                                      KEGG: dvm:DvMF_0100 methionine aminopeptidase; type I                                                                                                                COGs: COG0024 Methionine aminopeptidase                                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0280    f       254929     255186     prodigal   translation initiation factor IF-1                                                                                     TIGR          7      nd                nd                                       nd            nd          NR top hit: translation initiation factor IF-1 [Desulfotalea psychrophila LSv54] emb|CAG35876.1| probable translation initiation factor IF-1 [Desulfotalea psychrophila LSv54]                                                                                            SPTR: Translation initiation factor IF-1;                                                                                                                                               PFAM: S1 IF1 family protein                                                                                                                                                                                                                          TIGRFAM: translation initiation factor IF-1                                                                                     KEGG: dps:DP1147 translation initiation factor IF-1                                                                                                                  COGs: COG0361 Translation initiation factor 1 (IF-1)                                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0281    f       255245     255361     prodigal   ribosomal protein L36                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein L36 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] sp|B8IYL3.1|RL36_DESDA RecName: Full=50S ribosomal protein L36 gb|ACL48590.1| ribosomal protein L36 [Desulfovibrio desulfuricans subsp. d-TRUNCATED-                 SPTR: 50S ribosomal protein L36;                                                                                                                                                        PFAM: ribosomal protein L36                                                                                                                                                                                                                          TIGRFAM: ribosomal protein L36                                                                                                  KEGG: dds:Ddes_0682 50S ribosomal protein L36                                                                                                                        nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0282    f       255373     255753     prodigal   30S ribosomal protein S13                                                                                              TIGR          7      nd                nd                                       nd            nd          NR top hit: 30S ribosomal protein S13 [Thermoanaerobacter tengcongensis MB4] sp|Q8R7X9.1|RS13_THETN RecName: Full=30S ribosomal protein S13 gb|AAM25410.1| Ribosomal protein S13 [Thermoanaerobacter tengcongensis MB4]                                                   SPTR: 30S ribosomal protein S13;                                                                                                                                                        PFAM: ribosomal protein S13                                                                                                                                                                                                                          TIGRFAM: 30S ribosomal protein S13                                                                                              KEGG: tte:TTE2266 30S ribosomal protein S13                                                                                                                          COGs: COG0099 Ribosomal protein S13                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0283    f       255770     256159     prodigal   30S ribosomal protein S11                                                                                              TIGR          7      nd                nd                                       nd            nd          NR top hit: 30S ribosomal protein S11 [Persephonella marina EX-H1] gb|ACO04036.1| 30S ribosomal protein S11 [Persephonella marina EX-H1]                                                                                                                                  SPTR: 30S ribosomal protein S11;                                                                                                                                                        PFAM: ribosomal protein S11                                                                                                                                                                                                                          TIGRFAM: 30S ribosomal protein S11                                                                                              KEGG: pmx:PERMA_1222 30S ribosomal protein S11                                                                                                                       COGs: COG0100 Ribosomal protein S11                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0284    f       256172     256798     prodigal   ribosomal protein S4                                                                                                   TIGR          7      nd                nd                                       nd            nd          NR top hit: 30S ribosomal protein S4 [Caminibacter mediatlanticus TB-2] gb|EDM23206.1| 30S ribosomal protein S4 [Caminibacter mediatlanticus TB-2]                                                                                                                        SPTR: 30S ribosomal protein S4;                                                                                                                                                         PFAM: RNA-binding S4 domain protein; ribosomal protein S4                                                                                                                                                                                            TIGRFAM: ribosomal protein S4                                                                                                   KEGG: nam:NAMH_1696 30S ribosomal protein S4                                                                                                                         COGs: COG0522 Ribosomal protein S4 and related protein                                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0285    f       256829     257779     prodigal   DNA-directed RNA polymerase; alpha subunit                                                                             TIGR          6      nd                nd                                       nd            nd          NR top hit: DNA-directed RNA polymerase; alpha subunit [Thermocrinis albus DSM 14484] gb|ADC89375.1| DNA-directed RNA polymerase; alpha subunit [Thermocrinis albus DSM 14484]                                                                                            SPTR: DNA-directed RNA polymerase subunit alpha;                                                                                                                                        PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein                                                                                                                                                TIGRFAM: DNA-directed RNA polymerase; alpha subunit                                                                             KEGG: tal:Thal_0742 DNA-directed RNA polymerase; alpha subunit                                                                                                       COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0286    f       257782     258189     prodigal   ribosomal protein L17                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: 50S ribosomal protein L17 [Geobacter metallireducens GS-15] sp|Q39XX8.1|RL17_GEOMG RecName: Full=50S ribosomal protein L17 gb|ABB30896.1| LSU ribosomal protein L17P [Geobacter metallireducens GS-15]                                                        SPTR: 50S ribosomal protein L17;                                                                                                                                                        PFAM: ribosomal protein L17                                                                                                                                                                                                                          TIGRFAM: ribosomal protein L17                                                                                                  KEGG: gme:Gmet_0654 50S ribosomal protein L17                                                                                                                        COGs: COG0203 Ribosomal protein L17                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0287    r       258517     258263     prodigal   cell division topological specificity factor MinE                                                                      TIGR          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein HG1285_00855 [Hydrogenivirga sp. 128-5-R1-1] gb|EDP75269.1| hypothetical protein HG1285_00855 [Hydrogenivirga sp. 128-5-R1-1]                                                                                                            SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: Septum formation topological specificity factor MinE                                                                                                                                                                                           TIGRFAM: cell division topological specificity factor MinE                                                                      KEGG: dtu:Dtur_1398 cell division topological specificity factor MinE                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0288    r       259320     258520     prodigal   septum site-determining protein MinD                                                                                   TIGR          9      nd                nd                                       nd            nd          NR top hit: septum site-determining protein MinD [Sulfurihydrogenibium sp. YO3AOP1] gb|ACD66192.1| septum site-determining protein MinD [Sulfurihydrogenibium sp. YO3AOP1]                                                                                                SPTR: Septum site-determining protein MinD;                                                                                                                                             PFAM:                                                                                                                                                                                                                                                TIGRFAM: septum site-determining protein MinD                                                                                   KEGG: sul:SYO3AOP1_0552 septum site-determining protein MinD                                                                                                         COGs: COG2894 Septum formation inhibitor-activating ATPase                                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0289    r       259970     259320     prodigal   Septum formation inhibitor MinC                                                                                        PFAM          9      nd                nd                                       nd            nd          NR top hit: septum site-determining protein MinC [Syntrophothermus lipocalidus DSM 12680] gb|ADI01475.1| septum site-determining protein MinC [Syntrophothermus lipocalidus DSM 12680]                                                                                    SPTR: Septum site-determining protein MinC;                                                                                                                                             PFAM: Septum formation inhibitor MinC                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: slp:Slip_0694 septum site-determining protein MinC                                                                                                             COGs: COG0850 Septum formation inhibitor                                                                                                                                                        
tam15698  08/20/2010  Contig31    Theam_0290    f       260024     260824     prodigal   agmatinase                                                                                                             TIGR          10     nd                nd                                       nd            nd          NR top hit: agmatinase [Methanocaldococcus infernus ME] gb|ADG13750.1| agmatinase [Methanocaldococcus infernus ME]                                                                                                                                                        SPTR: Agmatinase;                                                                                                                                                                       PFAM: Arginase/agmatinase/formiminoglutamase                                                                                                                                                                                                         TIGRFAM: agmatinase                                                                                                             KEGG: mif:Metin_1095 agmatinase                                                                                                                                      COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0291    f       260826     261689     prodigal   spermidine synthase                                                                                                    TIGR          10     nd                nd                                       nd            nd          NR top hit: spermidine synthase [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN98349.1| spermidine synthase [Sulfurihydrogenibium azorense Az-Fu1]                                                                                                                          SPTR: Spermidine synthase;                                                                                                                                                              PFAM: Spermine synthase                                                                                                                                                                                                                              TIGRFAM: spermidine synthase                                                                                                    KEGG: saf:SULAZ_0709 spermidine synthase                                                                                                                             COGs: COG0421 Spermidine synthase                                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0292    f       261692     262747     prodigal   protein of unknown function DUF43                                                                                      PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein TK1691 [Thermococcus kodakarensis KOD1] dbj|BAD85880.1| hypothetical protein; conserved; DUF43 family [Thermococcus kodakarensis KOD1]                                                                                                   SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function DUF43                                                                                                                                                                                                              TIGRFAM:                                                                                                                        KEGG: tko:TK1691 hypothetical protein                                                                                                                                COGs: COG1568 methyltransferase                                                                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0293    r       263711     262776     prodigal   Bile acid:sodium symporter                                                                                             PFAM          11     nd                nd                                       nd            nd          NR top hit: bile acid:sodium symporter [Actinobacillus succinogenes 130Z] gb|ABR74524.1| Bile acid:sodium symporter [Actinobacillus succinogenes 130Z]                                                                                                                    SPTR: Bile acid:sodium symporter;                                                                                                                                                       PFAM: Bile acid:sodium symporter                                                                                                                                                                                                                     TIGRFAM:                                                                                                                        KEGG: asu:Asuc_1159 bile acid:sodium symporter                                                                                                                       COGs: COG0385 Na+-dependent transporter                                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0294    r       264154     263729     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein SELMODRAFT_408493 [Selaginella moellendorffii]                                                                                                                                                                                           SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: mag:amb4257 hypothetical protein                                                                                                                               nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0295    r       265494     264610     prodigal   purine or other phosphorylase family 1                                                                                 PFAM          16     nd                nd                                       nd            nd          NR top hit: similar to 5'-methylthioadenosine phosphorylase [Candidatus Kuenenia stuttgartiensis]                                                                                                                                                                         SPTR: Similar to 5'-methylthioadenosine phosphorylase;                                                                                                                                  PFAM: purine or other phosphorylase family 1                                                                                                                                                                                                         TIGRFAM:                                                                                                                        KEGG: hth:HTH_1912 purine nucleoside phosphorylase                                                                                                                   COGs: COG0005 Purine nucleoside phosphorylase                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0296    r       265981     265487     prodigal   7-cyano-7-deazaguanine reductase                                                                                       TIGR          11     nd                nd                                       nd            nd          NR top hit: preQ(1) synthase [Ruminococcus albus 8] gb|EFF19088.1| preQ(1) synthase [Ruminococcus albus 8]                                                                                                                                                                SPTR: NADPH-dependent 7-cyano-7-deazaguanine reductase;                                                                                                                                 PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase                                                                                                                                                                                                    TIGRFAM: 7-cyano-7-deazaguanine reductase                                                                                       KEGG: vpr:Vpar_0139 7-cyano-7-deazaguanine reductase                                                                                                                 COGs: COG0780 Enzyme related to GTP cyclohydrolase I                                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0297    f       266382     266981     prodigal   ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5                                                                   TIGR          7      nd                nd                                       nd            nd          NR top hit: general stress protein Ctc [Hydrogenivirga sp. 128-5-R1-1] gb|EDP74943.1| general stress protein Ctc [Hydrogenivirga sp. 128-5-R1-1]                                                                                                                          SPTR: 50S ribosomal protein L25;                                                                                                                                                        PFAM: Ribosomal protein L25-like                                                                                                                                                                                                                     TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5                                                                   KEGG: sul:SYO3AOP1_1687 50S ribosomal protein L25/general stress protein Ctc                                                                                         COGs: COG1825 Ribosomal protein L25 (general stress protein Ctc)                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0298    f       266981     267547     prodigal   peptidyl-tRNA hydrolase                                                                                                TIGR          7      nd                nd                                       nd            nd          NR top hit: peptidyl-tRNA hydrolase [Symbiobacterium thermophilum IAM 14863] sp|Q67JD0.1|PTH_SYMTH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH dbj|BAD42220.1| Stage V sporulation protein C; peptidyl-tRNA hydrolase [Symbiobacterium thermophil-TRUNCATED-         SPTR: Peptidyl-tRNA hydrolase;                                                                                                                                                          PFAM: peptidyl-tRNA hydrolase                                                                                                                                                                                                                        TIGRFAM: peptidyl-tRNA hydrolase                                                                                                KEGG: sth:STH3238 peptidyl-tRNA hydrolase                                                                                                                            COGs: COG0193 Peptidyl-tRNA hydrolase                                                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0299    f       267558     267938     prodigal   ribosomal protein S6                                                                                                   TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein S6 [Persephonella marina EX-H1] gb|ACO04921.1| ribosomal protein S6 [Persephonella marina EX-H1]                                                                                                                                            SPTR: 30S ribosomal protein S6;                                                                                                                                                         PFAM: Ribosomal protein S6; bacterial-like                                                                                                                                                                                                           TIGRFAM: ribosomal protein S6                                                                                                   KEGG: pmx:PERMA_1291 ribosomal protein S6                                                                                                                            COGs: COG0360 Ribosomal protein S6                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0300    f       267938     268315     prodigal   single-strand binding protein                                                                                          TIGR          2      nd                nd                                       nd            nd          NR top hit: single-strand binding protein family protein [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN98467.1| single-strand binding protein family protein [Sulfurihydrogenibium azorense Az-Fu1]                                                                        SPTR: Single-stranded DNA-binding protein;                                                                                                                                              PFAM: single-strand binding protein/Primosomal replication protein n                                                                                                                                                                                 TIGRFAM: single-strand binding protein                                                                                          KEGG: saf:SULAZ_0474 single-strand binding protein family protein                                                                                                    COGs: COG0629 Single-stranded DNA-binding protein                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0301    f       268331     268573     prodigal   ribosomal protein S18                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein S18 [Thermodesulfovibrio yellowstonii DSM 11347] gb|ACI20914.1| ribosomal protein S18 [Thermodesulfovibrio yellowstonii DSM 11347]                                                                                                          SPTR: 30S ribosomal protein S18;                                                                                                                                                        PFAM: ribosomal protein S18                                                                                                                                                                                                                          TIGRFAM: ribosomal protein S18                                                                                                  KEGG: tye:THEYE_A0795 ribosomal protein S18                                                                                                                          COGs: COG0238 Ribosomal protein S18                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0302    f       268578     269378     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein Pcar_1997 [Pelobacter carbinolicus DSM 2380] gb|ABA89238.1| conserved hypothetical membrane protein [Pelobacter carbinolicus DSM 2380]                                                                                                   SPTR: Conserved hypothetical membrane protein;                                                                                                                                          PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: pca:Pcar_1997 hypothetical protein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0303    f       269359     269811     prodigal   ribosomal protein L9                                                                                                   TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein L9 [Thermoanaerobacter tengcongensis MB4] sp|Q8R6M7.1|RL9_THETN RecName: Full=50S ribosomal protein L9 gb|AAM25879.1| Ribosomal protein L9 [Thermoanaerobacter tengcongensis MB4]                                                           SPTR: 50S ribosomal protein L9;                                                                                                                                                         PFAM: Ribosomal protein L9-like                                                                                                                                                                                                                      TIGRFAM: ribosomal protein L9                                                                                                   KEGG: tte:TTE2775 ribosomal protein L9                                                                                                                               COGs: COG0359 Ribosomal protein L9                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0304    f       269847     270374     prodigal   S-adenosylmethionine decarboxylase related                                                                             PFAM          10     nd                nd                                       nd            nd          NR top hit: S-adenosylmethionine decarboxylase related [Syntrophobacter fumaroxidans MPOB] gb|ABK16418.1| adenosylmethionine decarboxylase proenzyme [Syntrophobacter fumaroxidans MPOB]                                                                                  SPTR: Adenosylmethionine decarboxylase proenzyme;                                                                                                                                       PFAM: S-adenosylmethionine decarboxylase related                                                                                                                                                                                                     TIGRFAM:                                                                                                                        KEGG: sfu:Sfum_0720 S-adenosylmethionine decarboxylase related                                                                                                       COGs: COG1586 S-adenosylmethionine decarboxylase                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0305    r       271199     270360     prodigal   Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase                                                   PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein PERMA_0782 [Persephonella marina EX-H1] gb|ACO03970.1| conserved hypothetical protein [Persephonella marina EX-H1]                                                                                                                       SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase                                                                                                                                                                           TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_0782 hypothetical protein                                                                                                                            COGs: COG0313 methyltransferase                                                                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0306    r       271558     271178     prodigal   endoribonuclease L-PSP                                                                                                 TIGR          7      nd                nd                                       nd            nd          NR top hit: YjgH/F family protein - putative translation initiation inhibitor [Hyperthermus butylicus DSM 5456] gb|ABM80089.1| YjgH/F family protein - putative translation initiation inhibitor [Hyperthermus butylicus DSM 5456]                                        SPTR: YjgH/F family protein-putative translation initiation inhibitor;                                                                                                                  PFAM: Endoribonuclease L-PSP                                                                                                                                                                                                                         TIGRFAM: endoribonuclease L-PSP                                                                                                 KEGG: hbu:Hbut_0217 YjgH/F family protein - putative translation initiation inhibitor                                                                                COGs: COG0251 Putative translation initiation inhibitor yjgF family                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0307    f       271712     272026     prodigal   regulatory protein ArsR                                                                                                PFAM          11     nd                nd                                       nd            nd          NR top hit: putative transcriptional regulator; ArsR family [Leptospirillum ferrodiazotrophum]                                                                                                                                                                            SPTR: Transcriptional regulator; ArsR family;                                                                                                                                           PFAM: regulatory protein ArsR                                                                                                                                                                                                                        TIGRFAM:                                                                                                                        KEGG: alv:Alvin_3027 transcriptional regulator; ArsR family                                                                                                          nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0308    f       272030     272869     prodigal   acetyl-CoA carboxylase; carboxyl transferase; beta subunit                                                             TIGR          5      nd                nd                                       nd            nd          NR top hit: acetyl-CoA carboxylase; carboxyl transferase; beta subunit [Thermodesulfovibrio yellowstonii DSM 11347] gb|ACI20923.1| acetyl-CoA carboxylase; carboxyl transferase; beta subunit [Thermodesulfovibrio yellowstonii DSM 11347]                                SPTR: Acetyl-CoA carboxylase; carboxyl transferase; beta subunit;                                                                                                                       PFAM: carboxyl transferase                                                                                                                                                                                                                           TIGRFAM: acetyl-CoA carboxylase; carboxyl transferase; beta subunit                                                             KEGG: tye:THEYE_A0559 acetyl-CoA carboxylase; carboxyl transferase; beta subunit                                                                                     COGs: COG0777 Acetyl-CoA carboxylase beta subunit                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0309    f       272871     273110     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein MXAN_3350 [Myxococcus xanthus DK 1622] gb|AAO22877.1| hypothetical protein [Myxococcus xanthus] gb|ABF91158.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]                                                               SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: mxa:MXAN_3350 hypothetical protein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0310    f       273119     276295     prodigal   transcription-repair coupling factor                                                                                   TIGR          2      nd                nd                                       nd            nd          NR top hit: transcription-repair coupling factor [Geobacter sp. M18] gb|EET37247.1| transcription-repair coupling factor [Geobacter sp. M18]                                                                                                                              SPTR: Transcription-repair coupling factor;                                                                                                                                             PFAM: DEAD/DEAH box helicase domain protein; transcription factor CarD; helicase domain protein; TRCF domain protein                                                                                                                                 TIGRFAM: transcription-repair coupling factor                                                                                   KEGG: glo:Glov_0700 transcription-repair coupling factor                                                                                                             COGs: COG1197 Transcription-repair coupling factor (superfamily II helicase)                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0311    f       276297     277007     prodigal   Ankyrin                                                                                                                PFAM          11     nd                nd                                       nd            nd          NR top hit: MHC_I C-terminus family protein [Persephonella marina EX-H1] gb|ACO03140.1| MHC_I C-terminus family protein [Persephonella marina EX-H1]                                                                                                                      SPTR: MHC_I C-terminus family protein;                                                                                                                                                  PFAM: Ankyrin                                                                                                                                                                                                                                        TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_0371 MHC_I C-terminus family protein                                                                                                                 COGs: COG0666 FOG: Ankyrin repeat                                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0312    r       277510     277016     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein Sterm_2542 [Sebaldella termitidis ATCC 33386] gb|ACZ09392.1| hypothetical protein Sterm_2542 [Sebaldella termitidis ATCC 33386]                                                                                                          SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: str:Sterm_2542 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0313    f       277588     278736     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein HG1285_17524 [Hydrogenivirga sp. 128-5-R1-1] gb|EDP74409.1| hypothetical protein HG1285_17524 [Hydrogenivirga sp. 128-5-R1-1]                                                                                                            SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: sun:SUN_2276 hypothetical protein                                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0314    f       278790     279866     prodigal   phosphate ABC transporter; periplasmic phosphate-binding protein                                                       TIGR          9      nd                nd                                       nd            nd          NR top hit: phosphate ABC transporter; substrate-binding protein [Nitratiruptor sp. SB155-2] dbj|BAF69696.1| phosphate ABC transporter; substrate-binding protein [Nitratiruptor sp. SB155-2]                                                                             SPTR: Phosphate ABC transporter; substrate-binding protein;                                                                                                                             PFAM: extracellular solute-binding protein family 1                                                                                                                                                                                                  TIGRFAM: phosphate ABC transporter; periplasmic phosphate-binding protein                                                       KEGG: nis:NIS_0582 phosphate ABC transporter; substrate-binding protein                                                                                              COGs: COG0226 ABC-type phosphate transport system periplasmic component                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0315    f       280074     282884     prodigal   excinuclease ABC; A subunit                                                                                            TIGR          2      nd                nd                                       nd            nd          NR top hit: repair excision nuclease subunit A [Aquifex aeolicus VF5] sp|O66911.1|UVRA_AQUAE RecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A gb|AAC06874.1| repair excision nuclease subunit A [Aq-TRUNCATED-         SPTR: Excinuclease ABC; A subunit;                                                                                                                                                      PFAM: ABC transporter related                                                                                                                                                                                                                        TIGRFAM: excinuclease ABC; A subunit                                                                                            KEGG: aae:aq_686 excinuclease ABC subunit A                                                                                                                          COGs: COG0178 Excinuclease ATPase subunit                                                                                                                                                       
tam15698  08/20/2010  Contig31    Theam_0316    f       282942     283298     prodigal   DsrE family protein                                                                                                    PFAM          9      nd                nd                                       nd            nd          NR top hit: DsrE family protein [Acidovorax ebreus TPSY] gb|ACM33646.1| DsrE family protein [Acidovorax ebreus TPSY]                                                                                                                                                      SPTR: DsrE family protein;                                                                                                                                                              PFAM: DsrE family protein                                                                                                                                                                                                                            TIGRFAM:                                                                                                                        KEGG: dia:Dtpsy_2206 DsrE family protein                                                                                                                             COGs: COG1553 conserved hypothetical protein involved in intracellular sulfur reduction                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0317    r       284055     283327     prodigal   chain A; iron Centre cytochrome c protein                                                                              KEGG          11     nd                nd                                       nd            nd          NR top hit: chain A; iron Centre cytochrome c protein [Desulfitobacterium hafniense DCB-2] gb|ACL21287.1| chain A; iron Centre cytochrome c protein [Desulfitobacterium hafniense DCB-2]                                                                                  SPTR: Chain A; iron Centre cytochrome c protein;                                                                                                                                        PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dhd:Dhaf_3269 chain A; iron Centre cytochrome c protein                                                                                                        nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0318    f       284136     284879     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein PF0124 [Pyrococcus furiosus DSM 3638] gb|AAL80248.1| hypothetical protein PF0124 [Pyrococcus furiosus DSM 3638]                                                                                                                          SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: pfu:PF0124 hypothetical protein                                                                                                                                COGs: COG1378 transcriptional regulator protein                                                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0319    f       284915     285943     prodigal   4Fe-4S ferredoxin iron-sulfur binding domain protein                                                                   KEGG          3      nd                nd                                       nd            nd          NR top hit: iron-sulfur cluster-binding protein [Citrobacter youngae ATCC 29220] gb|EFE07995.1| iron-sulfur cluster-binding protein [Citrobacter youngae ATCC 29220]                                                                                                      SPTR: Iron-sulfur cluster-binding protein;                                                                                                                                              PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: pwa:Pecwa_2165 4Fe-4S ferredoxin iron-sulfur binding domain protein                                                                                            COGs: COG0348 Polyferredoxin                                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0320    r       286293     285946     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein SUN_0363 [Sulfurovum sp. NBC37-1] dbj|BAF71323.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]                                                                                                                                SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: sun:SUN_0363 hypothetical protein                                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0321    r       286603     286268     prodigal   SpoVG family protein                                                                                                   PFAM          9      nd                nd                                       nd            nd          NR top hit: putative septation protein spoVG [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN98873.1| putative septation protein spoVG [Sulfurihydrogenibium azorense Az-Fu1]                                                                                                SPTR: Putative septation protein spoVG;                                                                                                                                                 PFAM: SpoVG family protein                                                                                                                                                                                                                           TIGRFAM:                                                                                                                        KEGG: saf:SULAZ_0889 putative septation protein spoVG                                                                                                                COGs: COG2088 Uncharacterized protein involved in the regulation of septum location                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0322    r       287027     286593     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein Npun_F1008 [Nostoc punctiforme PCC 73102] gb|ACC79739.1| hypothetical protein Npun_F1008 [Nostoc punctiforme PCC 73102]                                                                                                                  SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: npu:Npun_F1008 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0323    f       287075     287737     prodigal   putative phosphoribosyltransferase                                                                                     KEGG          11     nd                nd                                       nd            nd          NR top hit: putative phosphoribosyltransferase [Caminibacter mediatlanticus TB-2] gb|EDM24072.1| putative phosphoribosyltransferase [Caminibacter mediatlanticus TB-2]                                                                                                    SPTR: Putative phosphoribosyltransferase;                                                                                                                                               PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: mpd:MCP_2970 putative phosphoribosyltransferase                                                                                                                COGs: COG1926 phosphoribosyltransferase                                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0324    f       287734     288108     prodigal   CMP/dCMP deaminase zinc-binding                                                                                        PFAM          16     nd                nd                                       nd            nd          NR top hit: cytidine deaminase [Aciduliprofundum boonei T469] ref|YP_003483762.1| cytidine deaminase [Aciduliprofundum boonei T469] gb|EDY35870.1| cytidine deaminase [Aciduliprofundum boonei T469] gb|ADD09200.1| cytidine deaminase [Aciduliprofundum -TRUNCATED-      SPTR: Cytidine deaminase;                                                                                                                                                               PFAM: CMP/dCMP deaminase zinc-binding                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: abi:Aboo_1393 cytidine deaminase                                                                                                                               COGs: COG0295 Cytidine deaminase                                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0325    f       288119     288790     prodigal   response regulator receiver                                                                                            PFAM          15     nd                nd                                       nd            nd          NR top hit: phosphate regulon transcriptional regulatory protein phoB [Nitrobacter winogradskyi Nb-255] gb|ABA03778.1| two component transcriptional regulator; winged helix family [Nitrobacter winogradskyi Nb-255]                                                     SPTR: Two component transcriptional regulator; winged helix family;                                                                                                                     PFAM: response regulator receiver; transcriptional regulator domain-containing protein                                                                                                                                                               TIGRFAM:                                                                                                                        KEGG: nwi:Nwi_0511 phosphate regulon transcriptional regulatory protein PhoB                                                                                         COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain                                                                               
tam15698  08/20/2010  Contig31    Theam_0326    f       289301     289885     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: unnamed protein product [Haemophilus parainfluenzae T3T1]                                                                                                                                                                                                     SPTR: Transcriptional regulator; XRE family;                                                                                                                                            PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: ami:Amir_2430 transcriptional regulator; XRE family                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0327    f       289933     294273     prodigal   Glutamate synthase (ferredoxin)                                                                                        PRIAM         10     nd                nd                                       nd            nd          NR top hit: ferredoxin-dependent glutamate synthase [Hydrogenobacter thermophilus TK-6] dbj|BAF44663.1| ferredoxin-dependent glutamate synthase [Hydrogenobacter thermophilus] dbj|BAI69330.1| ferredoxin-dependent glutamate synthase [Hydr-TRUNCATED-                   SPTR: Ferredoxin-dependent glutamate synthase;                                                                                                                                          PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein                                                                                              TIGRFAM:                                                                                                                        KEGG: hth:HTH_0871 ferredoxin-dependent glutamate synthase                                                                                                           COGs: COG0069 Glutamate synthase domain 2                                                                                                                                                       
tam15698  08/20/2010  Contig31    Theam_0328    r       295899     294304     prodigal   phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase                                           TIGR          16     nd                nd                                       nd            nd          NR top hit: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [Persephonella marina EX-H1] sp|C0QRH2.1|PUR9_PERMH RecName: Full=Bifunctional purine biosynthesis protein purH; Includes: RecName: Full=Phospho-TRUNCATED-                      SPTR: Bifunctional purine biosynthesis protein purH;                                                                                                                                    PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein                                                                                                                                                                               TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase                                           KEGG: pmx:PERMA_1500 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase                                                                    COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)                                                                                             
tam15698  08/20/2010  Contig31    Theam_0329    f       295988     296848     prodigal   band 7 protein                                                                                                         PFAM          9      nd                nd                                       nd            nd          NR top hit: band 7 protein [Hydrogenobaculum sp. SN] gb|EFD32066.1| band 7 protein [Hydrogenobaculum sp. SN]                                                                                                                                                              SPTR: Band 7 protein;                                                                                                                                                                   PFAM: band 7 protein                                                                                                                                                                                                                                 TIGRFAM:                                                                                                                        KEGG: hya:HY04AAS1_1091 band 7 protein                                                                                                                               COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0330    f       296835     297278     prodigal   protein of unknown function DUF107                                                                                     PFAM          9      nd                nd                                       nd            nd          NR top hit: hypothetical protein PAB1325 [Pyrococcus abyssi GE5] emb|CAB50467.1| Hypothetical protein [Pyrococcus abyssi GE5]                                                                                                                                             SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function DUF107                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: pab:PAB1325 hypothetical protein                                                                                                                               COGs: COG1585 Membrane protein implicated in regulation of membrane protease activity                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0331    f       297271     298344     prodigal   alanine racemase                                                                                                       TIGR          9      nd                nd                                       nd            nd          NR top hit: RecName: Full=Alanine racemase gb|AAF23014.1|AF212103_1 alanine racemase [Aquifex pyrophilus]                                                                                                                                                                 SPTR: Alanine racemase;                                                                                                                                                                 PFAM: alanine racemase domain protein                                                                                                                                                                                                                TIGRFAM: alanine racemase                                                                                                       KEGG: tal:Thal_0333 alanine racemase                                                                                                                                 COGs: COG0787 Alanine racemase                                                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0332    f       298319     299119     prodigal   ribosomal L11 methyltransferase                                                                                        PFAM          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein L11 methyltransferase [Finegoldia magna ATCC 53516] gb|EFH92548.1| ribosomal protein L11 methyltransferase [Finegoldia magna ATCC 53516]                                                                                                    SPTR: Ribosomal protein L11 methyltransferase;                                                                                                                                          PFAM: ribosomal L11 methyltransferase                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: fma:FMG_0778 ribosomal protein L11 methyltransferase                                                                                                           COGs: COG2264 Ribosomal protein L11 methylase                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0333    f       299095     299940     prodigal   PHP  domain protein                                                                                                    PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein HM1_0436 [Heliobacterium modesticaldum Ice1] gb|ABZ83053.1| conserved domain protein [Heliobacterium modesticaldum Ice1]                                                                                                                 SPTR: Conserved domain protein;                                                                                                                                                         PFAM: PHP  domain protein                                                                                                                                                                                                                            TIGRFAM:                                                                                                                        KEGG: hmo:HM1_0436 hypothetical protein                                                                                                                              COGs: COG0613 metal-dependent phosphoesterase (PHP family)                                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0334    r       302250     300340     prodigal   Protein of unknown function DUF2081                                                                                    PFAM          13     nd                nd                                       nd            nd          NR top hit: protein of unknown function DUF262 [Kosmotoga olearia TBF 19.5.1] gb|ACR78784.1| protein of unknown function DUF262 [Kosmotoga olearia TBF 19.5.1]                                                                                                            SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: Protein of unknown function DUF2081; protein of unknown function DUF262                                                                                                                                                                        TIGRFAM:                                                                                                                        KEGG: kol:Kole_0055 protein of unknown function DUF262                                                                                                               COGs: COG3472 conserved hypothetical protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0335    f       302422     302673     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein Geob_1483 [Geobacter sp. FRC-32] gb|ACM19842.1| conserved hypothetical protein [Geobacter sp. FRC-32]                                                                                                                                    SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: geo:Geob_1483 hypothetical protein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0336    f       302673     303203     prodigal   20S proteasome A and B subunits                                                                                        PFAM          9      nd                nd                                       nd            nd          NR top hit: ATP-dependent protease HslV [Thermodesulfovibrio yellowstonii DSM 11347] sp|B5YFZ9.1|HSLV_THEYD RecName: Full=ATP-dependent protease subunit HslV gb|ACI21527.1| ATP-dependent protease HslV [Thermodesulfovibrio yellowstonii DSM -TRUNCATED-                SPTR: ATP-dependent protease subunit HslV;                                                                                                                                              PFAM: 20S proteasome A and B subunits                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: tye:THEYE_A1396 ATP-dependent protease peptidase subunit                                                                                                       COGs: COG5405 ATP-dependent protease HslVU (ClpYQ) peptidase subunit                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0337    f       303213     304655     prodigal   heat shock protein HslVU; ATPase subunit HslU                                                                          TIGR          9      nd                nd                                       nd            nd          NR top hit: ATP-dependent protease ATP-binding subunit HslU [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN99799.1| ATP-dependent protease HslVU; ATPase subunit [Sulfurihydrogenibium azorense Az-Fu1]                                                                     SPTR: ATP-dependent protease ATPase subunit HslU;                                                                                                                                       PFAM: ATPase AAA-2 domain protein; Clp ATPase-like                                                                                                                                                                                                   TIGRFAM: heat shock protein HslVU; ATPase subunit HslU                                                                          KEGG: saf:SULAZ_1537 ATP-dependent protease ATP-binding subunit HslU                                                                                                 COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase subunit                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0338    f       304664     305695     prodigal   peptidase M24                                                                                                          PFAM          10     nd                nd                                       nd            nd          NR top hit: proline dipeptidase [Geobacillus thermodenitrificans NG80-2] ref|ZP_03147573.1| peptidase M24 [Geobacillus sp. G11MC16] gb|ABO67689.1| Proline dipeptidase [Geobacillus thermodenitrificans NG80-2] gb|EDY06508.1| peptidase M24 [Geobacillu-TRUNCATED-       SPTR: Proline dipeptidase;                                                                                                                                                              PFAM: peptidase M24; creatinase                                                                                                                                                                                                                      TIGRFAM:                                                                                                                        KEGG: gtn:GTNG_2342 proline dipeptidase                                                                                                                              COGs: COG0006 Xaa-Pro aminopeptidase                                                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0339    r       306545     305685     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein SULAZ_0856 [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN98708.1| conserved hypothetical protein [Sulfurihydrogenibium azorense Az-Fu1]                                                                                                   SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: saf:SULAZ_0856 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0340    r       306919     306548     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein SULAZ_0857 [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN99398.1| conserved hypothetical protein [Sulfurihydrogenibium azorense Az-Fu1]                                                                                                   SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: saf:SULAZ_0857 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0341    r       308084     306897     prodigal   protein of unknown function DUF324                                                                                     PFAM          2      nd                nd                                       nd            nd          NR top hit: crispr-associated ramp protein; Cmr4 family [Sulfurihydrogenibium yellowstonense SS-5] gb|EEP61194.1| crispr-associated ramp protein; Cmr4 family [Sulfurihydrogenibium yellowstonense SS-5]                                                                  SPTR: Crispr-associated ramp protein; Cmr4 family;                                                                                                                                      PFAM: protein of unknown function DUF324                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: saf:SULAZ_0858 crispr-associated RAMP protein; Cmr4 family                                                                                                     COGs: COG1336 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0342    r       311181     308086     prodigal   CRISPR-associated protein; Csx11 family                                                                                TIGR          11     nd                nd                                       nd            nd          NR top hit: crispr-associated protein; Csx11 family [Sulfurihydrogenibium yellowstonense SS-5] gb|EEP61195.1| crispr-associated protein; Csx11 family [Sulfurihydrogenibium yellowstonense SS-5]                                                                          SPTR: Crispr-associated protein; Csx11 family;                                                                                                                                          PFAM:                                                                                                                                                                                                                                                TIGRFAM: CRISPR-associated protein; Csx11 family                                                                                KEGG: tit:Thit_1355 CRISPR-associated protein; Csx11 family                                                                                                          nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0343    r       312332     311169     prodigal   protein of unknown function DUF324                                                                                     PFAM          11     nd                nd                                       nd            nd          NR top hit: protein of unknown function DUF324 [Methanocaldococcus infernus ME] gb|ADG12837.1| protein of unknown function DUF324 [Methanocaldococcus infernus ME]                                                                                                        SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function DUF324                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: mif:Metin_0165 protein of unknown function DUF324                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0344    r       313587     312325     prodigal   CRISPR-associated RAMP protein; Cmr1 family                                                                            TIGR          11     nd                nd                                       nd            nd          NR top hit: CRISPR-associated RAMP protein; Cmr1 family [Methanocaldococcus infernus ME] gb|ADG12836.1| CRISPR-associated RAMP protein; Cmr1 family [Methanocaldococcus infernus ME]                                                                                      SPTR: CRISPR-associated RAMP protein; Cmr1 family;                                                                                                                                      PFAM:                                                                                                                                                                                                                                                TIGRFAM: CRISPR-associated RAMP protein; Cmr1 family                                                                            KEGG: mif:Metin_0164 CRISPR-associated RAMP protein; Cmr1 family                                                                                                     nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0345    f       313676     314776     prodigal   queuine tRNA-ribosyltransferase                                                                                        TIGR          7      nd                nd                                       nd            nd          NR top hit: queuine tRNA-ribosyltransferase [Sulfurihydrogenibium sp. YO3AOP1] gb|ACD66870.1| queuine tRNA-ribosyltransferase [Sulfurihydrogenibium sp. YO3AOP1]                                                                                                          SPTR: Queuine tRNA-ribosyltransferase;                                                                                                                                                  PFAM: Queuine/other tRNA-ribosyltransferase                                                                                                                                                                                                          TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase; various specificities                                  KEGG: sul:SYO3AOP1_1259 queuine tRNA-ribosyltransferase                                                                                                              COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase                                                                                                                                       
tam15698  08/20/2010  Contig31    Theam_0346    r       315068     314778     prodigal   mevalonate kinase                                                                                                      KEGG          0      nd                nd                                       nd            nd          NR top hit: mevalonate kinase [Methanocaldococcus sp. FS406-22] gb|ADC68868.1| mevalonate kinase [Methanocaldococcus sp. FS406-22]                                                                                                                                        SPTR: Mevalonate kinase;                                                                                                                                                                PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: mfs:MFS40622_0170 mevalonate kinase                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0347    f       315156     315659     prodigal   3-isopropylmalate dehydratase; small subunit                                                                           TIGR          10     nd                nd                                       nd            nd          NR top hit: 3-isopropylmalate dehydratase; small subunit [Persephonella marina EX-H1] gb|ACO04259.1| 3-isopropylmalate dehydratase; small subunit [Persephonella marina EX-H1]                                                                                            SPTR: 3-isopropylmalate dehydratase; small subunit;                                                                                                                                     PFAM: aconitate hydratase domain-containing protein                                                                                                                                                                                                  TIGRFAM: 3-isopropylmalate dehydratase; small subunit                                                                           KEGG: pmx:PERMA_0505 3-isopropylmalate dehydratase; small subunit                                                                                                    COGs: COG0066 3-isopropylmalate dehydratase small subunit                                                                                                                                       
tam15698  08/20/2010  Contig31    Theam_0348    f       315671     316750     prodigal   3-isopropylmalate dehydrogenase                                                                                        TIGR          10     nd                nd                                       nd            nd          NR top hit: 3-isopropylmalate dehydrogenase [Hydrogenobacter thermophilus TK-6] dbj|BAI69975.1| 3-isopropylmalate dehydrogenase [Hydrogenobacter thermophilus TK-6]                                                                                                       SPTR: 3-isopropylmalate dehydrogenase;                                                                                                                                                  PFAM: isocitrate/isopropylmalate dehydrogenase                                                                                                                                                                                                       TIGRFAM: 3-isopropylmalate dehydrogenase                                                                                        KEGG: hth:HTH_1526 3-isopropylmalate dehydrogenase                                                                                                                   COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase                                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0349    f       316762     317778     prodigal   aspartate-semialdehyde dehydrogenase                                                                                   TIGR          10     nd                nd                                       nd            nd          NR top hit: aspartate-semialdehyde dehydrogenase [Sulfurihydrogenibium yellowstonense SS-5] gb|EEP60534.1| aspartate-semialdehyde dehydrogenase [Sulfurihydrogenibium yellowstonense SS-5]                                                                                SPTR: Aspartate-semialdehyde dehydrogenase;                                                                                                                                             PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding                                                                                                                                                       TIGRFAM: aspartate-semialdehyde dehydrogenase                                                                                   KEGG: saf:SULAZ_1661 aspartate-semialdehyde dehydrogenase                                                                                                            COGs: COG0136 Aspartate-semialdehyde dehydrogenase                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0350    f       317791     318150     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: roadblock/LC7 family protein [Ignicoccus hospitalis KIN4/I] gb|ABU82109.1| Roadblock/LC7 family protein [Ignicoccus hospitalis KIN4/I]                                                                                                                        SPTR: Roadblock/LC7 family protein;                                                                                                                                                     PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: iho:Igni_0929 roadblock/LC7 family protein                                                                                                                     nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0351    f       318164     318856     prodigal   metal-dependent hydrolase                                                                                              KEGG          11     nd                nd                                       nd            nd          NR top hit: metallo-beta-lactamase family protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gb|EFD25222.1| metallo-beta-lactamase family protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]                                                                      SPTR: Metallo-beta-lactamase family protein;                                                                                                                                            PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: trq:TRQ2_1653 metal-dependent hydrolase                                                                                                                        COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold                                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0352    f       318856     319605     prodigal   Patatin                                                                                                                PFAM          11     nd                nd                                       nd            nd          NR top hit: patatin [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN98846.1| patatin [Sulfurihydrogenibium azorense Az-Fu1]                                                                                                                                                  SPTR: Patatin;                                                                                                                                                                          PFAM: Patatin                                                                                                                                                                                                                                        TIGRFAM:                                                                                                                        KEGG: saf:SULAZ_1087 patatin                                                                                                                                         COGs: COG1752 esterase of the alpha-beta hydrolase superfamily                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0353    f       319596     319874     prodigal   acylphosphatase                                                                                                        PFAM          3      nd                nd                                       nd            nd          NR top hit: acylphosphatase [Thermus aquaticus Y51MC23] gb|EED10273.1| acylphosphatase [Thermus aquaticus Y51MC23]                                                                                                                                                        SPTR: Acylphosphatase;                                                                                                                                                                  PFAM: acylphosphatase                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: fpl:Ferp_1517 acylphosphatase                                                                                                                                  COGs: COG1254 Acylphosphatase                                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0354    f       319849     320901     prodigal   Peptidase M23                                                                                                          PFAM          9      nd                nd                                       nd            nd          NR top hit: lipoprotein [Persephonella marina EX-H1] gb|ACO03962.1| lipoprotein [Persephonella marina EX-H1]                                                                                                                                                              SPTR: Lipoprotein;                                                                                                                                                                      PFAM: Peptidase M23; Peptidoglycan-binding lysin domain                                                                                                                                                                                              TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1851 lipoprotein                                                                                                                                     COGs: COG0739 Membrane protein related to metalloendopeptidase                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0355    r       323255     321813     prodigal   cation transporter                                                                                                     PFAM          9      nd                nd                                       nd            nd          NR top hit: Trk system; membrane component [Persephonella marina EX-H1] gb|ACO04165.1| Trk system; membrane component [Persephonella marina EX-H1]                                                                                                                        SPTR: Trk system; membrane component;                                                                                                                                                   PFAM: cation transporter                                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1271 trk system; membrane component                                                                                                                  COGs: COG0168 Trk-type K+ transport systems membrane components                                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0356    r       324554     323259     prodigal   TrkA-N domain protein                                                                                                  PFAM          9      nd                nd                                       nd            nd          NR top hit: TrkA-N domain family protein [Persephonella marina EX-H1] gb|ACO04541.1| TrkA-N domain family protein [Persephonella marina EX-H1]                                                                                                                            SPTR: TrkA-N domain family protein;                                                                                                                                                     PFAM: TrkA-N domain protein; TrkA-C domain protein                                                                                                                                                                                                   TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1272 TrkA-N domain family protein                                                                                                                    COGs: COG0569 K+ transport systems NAD-binding component                                                                                                                                        
tam15698  08/20/2010  Contig31    Theam_0357    r       325621     324611     prodigal   cytochrome c-type biogenesis protein CcsB                                                                              TIGR          9      nd                nd                                       nd            nd          NR top hit: cytochrome c-type biogenesis protein CcsB [Desulfatibacillum alkenivorans AK-01] gb|ACL02969.1| cytochrome c-type biogenesis protein CcsB [Desulfatibacillum alkenivorans AK-01]                                                                              SPTR: Cytochrome c-type biogenesis protein CcsB;                                                                                                                                        PFAM: cytochrome c assembly protein                                                                                                                                                                                                                  TIGRFAM: cytochrome c-type biogenesis protein CcsB                                                                              KEGG: dal:Dalk_1266 cytochrome c-type biogenesis protein CcsB                                                                                                        COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0358    r       326949     325618     prodigal   ResB family protein                                                                                                    KEGG          9      nd                nd                                       nd            nd          NR top hit: ResB family protein [Geobacter uraniireducens Rf4] gb|ABQ27992.1| ResB family protein [Geobacter uraniireducens Rf4]                                                                                                                                          SPTR: ResB family protein;                                                                                                                                                              PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: gur:Gura_3842 ResB family protein                                                                                                                              COGs: COG1333 ResB protein required for cytochrome c biosynthesis                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0359    r       328120     326996     prodigal   amidohydrolase                                                                                                         PFAM          16     nd                nd                                       nd            nd          NR top hit: amidohydrolase [Geobacter sp. M21] gb|ACT17302.1| amidohydrolase [Geobacter sp. M21]                                                                                                                                                                          SPTR: Amidohydrolase;                                                                                                                                                                   PFAM: amidohydrolase                                                                                                                                                                                                                                 TIGRFAM:                                                                                                                        KEGG: gem:GM21_1241 amidohydrolase                                                                                                                                   COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0360    r       329546     328104     prodigal   metal dependent phophohydrolase                                                                                        TIGR          7      nd                nd                                       nd            nd          NR top hit: poly A polymerase [Aquifex aeolicus VF5] gb|AAC07883.1| poly A polymerase [Aquifex aeolicus VF5]                                                                                                                                                              SPTR: Poly A polymerase;                                                                                                                                                                PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain                                                                                                                                                      TIGRFAM: metal dependent phophohydrolase                                                                                        KEGG: aae:aq_2158 poly A polymerase                                                                                                                                  COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0361    f       329567     330238     prodigal   ABC transporter related                                                                                                PFAM          9      nd                nd                                       nd            nd          NR top hit: lipoprotein-releasing system ATP-binding protein LolD [Persephonella marina EX-H1] gb|ACO03831.1| lipoprotein-releasing system ATP-binding protein LolD [Persephonella marina EX-H1]                                                                          SPTR: Lipoprotein-releasing system ATP-binding protein LolD;                                                                                                                            PFAM: ABC transporter related                                                                                                                                                                                                                        TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1738 lipoprotein-releasing system ATP-binding protein LolD                                                                                           COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0362    f       330266     332740     prodigal   ATPase AAA-2 domain protein                                                                                            PFAM          9      nd                nd                                       nd            nd          NR top hit: negative regulator of genetic competence ClpC/mecB [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN98764.1| negative regulator of genetic competence ClpC/mecB [Sulfurihydrogenibium azorense Az-Fu1]                                                            SPTR: Negative regulator of genetic competence ClpC/mecB;                                                                                                                               PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp  domain protein; Clp ATPase-like                                                                                                                                           TIGRFAM:                                                                                                                        KEGG: saf:SULAZ_0309 negative regulator of genetic competence ClpC/MecB                                                                                              COGs: COG0542 ATPase with chaperone activity ATP-binding subunit                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0363    f       332737     333456     prodigal   protein of unknown function DUF558                                                                                     PFAM          13     nd                nd                                       nd            nd          NR top hit: PAS/PAC sensor signal transduction histidine kinase [Saccharophagus degradans 2-40] gb|ABD79731.1| PAS/PAC sensor signal transduction histidine kinase [Saccharophagus degradans 2-40]                                                                        SPTR: PAS/PAC sensor signal transduction histidine kinase;                                                                                                                              PFAM: protein of unknown function DUF558                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: sde:Sde_0467 PAS/PAC sensor signal transduction histidine kinase                                                                                               COGs: COG1385 conserved hypothetical protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0364    r       333552     333388     prodigal   hypothetical protein                                                                                                   hypothetical  13     nd                nd                                       nd            nd          nd                                                                                                                                                                                                                                                                        nd                                                                                                                                                                                      PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        nd                                                                                                                                                                   nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0365    f       333606     334157     prodigal   Appr-1-p processing domain protein                                                                                     PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein DICTH_1609 [Dictyoglomus thermophilum H-6-12] gb|ACI20035.1| conserved protein [Dictyoglomus thermophilum H-6-12]                                                                                                                        SPTR: Conserved protein;                                                                                                                                                                PFAM: Appr-1-p processing domain protein                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: dth:DICTH_1609 hypothetical protein                                                                                                                            COGs: COG2110 phosphatase homologous to the C-terminal domain of histone macroH2A1                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0366    f       334271     336244     prodigal   chemotaxis sensory transducer                                                                                          PFAM          9      nd                nd                                       nd            nd          NR top hit: methyl-accepting chemotaxis sensory transducer [Campylobacterales bacterium GD 1] gb|EDZ63262.1| methyl-accepting chemotaxis sensory transducer [Campylobacterales bacterium GD 1]                                                                            SPTR: Methyl-accepting chemotaxis sensory transducer;                                                                                                                                   PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein                                                                                                                                                                     TIGRFAM:                                                                                                                        KEGG: tdn:Suden_0209 methyl-accepting chemotaxis sensory transducer                                                                                                  COGs: COG0840 Methyl-accepting chemotaxis protein                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0367    r       336626     336234     prodigal   HEPN domain protein                                                                                                    PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein Metvu_1045 [Methanocaldococcus vulcanius M7] gb|ACX72903.1| conserved hypothetical protein [Methanocaldococcus vulcanius M7]                                                                                                             SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: HEPN domain protein                                                                                                                                                                                                                            TIGRFAM:                                                                                                                        KEGG: mvu:Metvu_1045 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0368    r       336909     336616     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: Molybdopterin biosynthesis protein moeA [Bacillus cereus 172560W] gb|EEK62407.1| Molybdopterin biosynthesis protein moeA [Bacillus cereus 172560W]                                                                                                            SPTR: Molybdopterin biosynthesis protein moeA;                                                                                                                                          PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: aac:Aaci_3143 hypothetical protein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0369    r       337906     336962     prodigal   pseudouridine synthase; RluA family                                                                                    TIGR          7      nd                nd                                       nd            nd          NR top hit: hypothetical protein HG1285_15736 [Hydrogenivirga sp. 128-5-R1-1] gb|EDP75430.1| hypothetical protein HG1285_15736 [Hydrogenivirga sp. 128-5-R1-1]                                                                                                            SPTR: Pseudouridine synthase;                                                                                                                                                           PFAM: pseudouridine synthase; RNA-binding S4 domain protein                                                                                                                                                                                          TIGRFAM: pseudouridine synthase; RluA family                                                                                    KEGG: aae:aq_1758 hypothetical protein                                                                                                                               COGs: COG0564 Pseudouridylate synthase 23S RNA-specific                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0370    f       337972     338145     prodigal   protein of unknown function DUF329                                                                                     PFAM          11     nd                nd                                       nd            nd          NR top hit: zinc-binding protein [Marinobacter algicola DG893] gb|EDM47408.1| zinc-binding protein [Marinobacter algicola DG893]                                                                                                                                          SPTR: UPF0243 zinc-binding protein MDG893_01335;                                                                                                                                        PFAM: protein of unknown function DUF329                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: tye:THEYE_A1648 putative zinc-binding protein                                                                                                                  nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0371    f       338117     340699     prodigal   DNA mismatch repair protein MutS                                                                                       TIGR          2      nd                nd                                       nd            nd          NR top hit: DNA mismatch repair protein MutS [Persephonella marina EX-H1] sp|C0QPF0.1|MUTS_PERMH RecName: Full=DNA mismatch repair protein mutS gb|ACO04590.1| DNA mismatch repair protein MutS [Persephonella marina EX-H1]                                              SPTR: DNA mismatch repair protein mutS;                                                                                                                                                 PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein                                                                                                                       TIGRFAM: DNA mismatch repair protein MutS                                                                                       KEGG: pmx:PERMA_0758 DNA mismatch repair protein MutS                                                                                                                COGs: COG0249 Mismatch repair ATPase (MutS family)                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0372    r       341186     340683     prodigal   protein of unknown function DUF996                                                                                     PFAM          11     nd                nd                                       nd            nd          NR top hit: protein of unknown function DUF996 [Hydrogenobaculum sp. SN] gb|EFD31650.1| protein of unknown function DUF996 [Hydrogenobaculum sp. SN]                                                                                                                      SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function DUF996                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: pfu:PF1494 hypothetical protein                                                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0373    r       342787     341183     prodigal   2-isopropylmalate synthase/homocitrate synthase family protein                                                         TIGR          10     nd                nd                                       nd            nd          NR top hit: 2-isopropylmalate synthase/homocitrate synthase family protein [Thermotoga naphthophila RKU-10] gb|ADA66435.1| 2-isopropylmalate synthase/homocitrate synthase family protein [Thermotoga naphthophila RKU-10]                                                SPTR: 2-isopropylmalate synthase/homocitrate synthase family protein;                                                                                                                   PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein                                                                                                                                                         TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein                                                         KEGG: tnp:Tnap_0332 2-isopropylmalate synthase/homocitrate synthase family protein                                                                                   COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0374    r       344018     342798     prodigal   aspartate kinase                                                                                                       TIGR          10     nd                nd                                       nd            nd          NR top hit: asparate kinase; monofunctional class [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN98712.1| asparate kinase; monofunctional class [Sulfurihydrogenibium azorense Az-Fu1]                                                                                      SPTR: Aspartokinase;                                                                                                                                                                    PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein                                                                                                                                                                    TIGRFAM: aspartate kinase; aspartate kinase; monofunctional class                                                               KEGG: saf:SULAZ_1497 asparate kinase; monofunctional class                                                                                                           COGs: COG0527 Aspartokinase                                                                                                                                                                     
tam15698  08/20/2010  Contig31    Theam_0375    f       344110     345333     prodigal   molybdenum cofactor synthesis domain protein                                                                           TIGR          12     nd                nd                                       nd            nd          NR top hit: molybdenum cofactor biosynthesis protein A [Aquifex aeolicus VF5] gb|AAC06407.1| molybdenum cofactor biosynthesis protein A [Aquifex aeolicus VF5]                                                                                                            SPTR: Molybdenum cofactor biosynthesis protein A;                                                                                                                                       PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV                                                                                                                                               TIGRFAM: molybdenum cofactor synthesis domain protein                                                                           KEGG: aae:aq_030 molybdenum cofactor biosynthesis protein A                                                                                                          COGs: COG0303 Molybdopterin biosynthesis enzyme                                                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0376    r       347337     345328     prodigal   Aldehyde ferredoxin oxidoreductase                                                                                     PFAM          3      nd                nd                                       nd            nd          NR top hit: Aldehyde ferredoxin oxidoreductase; N-terminal domain protein [Thermococcus barophilus MP] gb|EDY41166.1| Aldehyde ferredoxin oxidoreductase; N-terminal domain protein [Thermococcus barophilus MP]                                                          SPTR: Aldehyde ferredoxin oxidoreductase; N-terminal domain protein;                                                                                                                    PFAM: Aldehyde ferredoxin oxidoreductase ; aldehyde ferredoxin oxidoreductase                                                                                                                                                                        TIGRFAM:                                                                                                                        KEGG: ton:TON_1498 tungsten-containing glyceraldehyde-3-phosphate:ferredoxin oxidoreductase                                                                          COGs: COG2414 Aldehyde:ferredoxin oxidoreductase                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0377    r       348457     347408     prodigal   N-acetyl-gamma-glutamyl-phosphate reductase                                                                            TIGR          10     nd                nd                                       nd            nd          NR top hit: N-acetyl-gamma-glutamyl-phosphate reductase [Pelotomaculum thermopropionicum SI] sp|A5D504.1|ARGC_PELTS RecName: Full=N-acetyl-gamma-glutamyl-phosphate reductase; Short=AGPR; AltName: Full=N-acetyl-glutamate semialdehyde -TRUNCATED-                      SPTR: N-acetyl-gamma-glutamyl-phosphate reductase;                                                                                                                                      PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region                                                                                                                                                       TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase                                                                            KEGG: pth:PTH_0501 N-acetyl-gamma-glutamyl-phosphate reductase                                                                                                       COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase                                                                                                                                        
tam15698  08/20/2010  Contig31    Theam_0378    r       348839     348429     prodigal   ribosomal protein S9                                                                                                   PFAM          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein S09 [Hydrogenivirga sp. 128-5-R1-1] gb|EDP73545.1| ribosomal protein S09 [Hydrogenivirga sp. 128-5-R1-1]                                                                                                                                    SPTR: Ribosomal protein S09;                                                                                                                                                            PFAM: ribosomal protein S9                                                                                                                                                                                                                           TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_0430 30S ribosomal protein S9                                                                                                                        COGs: COG0103 Ribosomal protein S9                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0379    r       349279     348851     prodigal   ribosomal protein L13                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: 50S ribosomal protein L13 [Aquifex aeolicus VF5] sp|O67722.1|RL13_AQUAE RecName: Full=50S ribosomal protein L13 gb|AAC07691.1| ribosomal protein L13 [Aquifex aeolicus VF5]                                                                                   SPTR: 50S ribosomal protein L13;                                                                                                                                                        PFAM: ribosomal protein L13                                                                                                                                                                                                                          TIGRFAM: ribosomal protein L13                                                                                                  KEGG: aae:aq_1877 50S ribosomal protein L13                                                                                                                          COGs: COG0102 Ribosomal protein L13                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0380    f       349872     350159     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein GCWU000282_00099 [Catonella morbi ATCC 51271] gb|EEP23737.1| hypothetical protein GCWU000282_00099 [Catonella morbi ATCC 51271]                                                                                                          SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: ptm:GSPATT00032959001 hypothetical protein                                                                                                                     nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0381    r       351307     350279     prodigal   heat-inducible transcription repressor HrcA                                                                            TIGR          6      nd                nd                                       nd            nd          NR top hit: heat-inducible transcription repressor HrcA [Syntrophobacter fumaroxidans MPOB] sp|A0LH26.1|HRCA_SYNFM RecName: Full=Heat-inducible transcription repressor hrcA gb|ABK16728.1| heat-inducible transcription repressor HrcA [Syntrophobact-TRUNCATED-         SPTR: Heat-inducible transcription repressor hrcA;                                                                                                                                      PFAM: Winged helix-turn-helix transcription repressor; HrcA-like                                                                                                                                                                                     TIGRFAM: heat-inducible transcription repressor HrcA                                                                            KEGG: sfu:Sfum_1034 heat-inducible transcription repressor HrcA                                                                                                      COGs: COG1420 Transcriptional regulator of heat shock gene                                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0382    r       351834     351319     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein Dacet_1433 [Denitrovibrio acetiphilus DSM 12809] gb|ADD68203.1| conserved hypothetical protein [Denitrovibrio acetiphilus DSM 12809]                                                                                                     SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: transferase hexapeptide repeat containing protein                                                                                                                                                                                              TIGRFAM:                                                                                                                        KEGG: dap:Dacet_1433 hypothetical protein                                                                                                                            COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0383    f       352012     352332     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: cytochrome c family protein [Methylococcus capsulatus str. Bath] gb|AAU90407.1| cytochrome c family protein [Methylococcus capsulatus str. Bath]                                                                                                              SPTR: Cytochrome c family protein;                                                                                                                                                      PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: mca:MCA0426 cytochrome c family protein                                                                                                                        nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0384    f       352447     354771     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: cytochrome c family protein [Thiomonas intermedia K12] gb|ADG31979.1| cytochrome c family protein [Thiomonas intermedia K12]                                                                                                                                  SPTR: Cytochrome c family protein;                                                                                                                                                      PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: tin:Tint_2638 cytochrome c family protein                                                                                                                      nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0385    f       354867     355535     prodigal   ribulose-phosphate 3-epimerase                                                                                         TIGR          4      nd                nd                                       nd            nd          NR top hit: ribulose-phosphate 3-epimerase [Persephonella marina EX-H1] gb|ACO03058.1| ribulose-phosphate 3-epimerase [Persephonella marina EX-H1]                                                                                                                        SPTR: Ribulose-phosphate 3-epimerase;                                                                                                                                                   PFAM: ribulose-phosphate 3-epimerase                                                                                                                                                                                                                 TIGRFAM: ribulose-phosphate 3-epimerase                                                                                         KEGG: pmx:PERMA_0635 ribulose-phosphate 3-epimerase                                                                                                                  COGs: COG0036 Pentose-5-phosphate-3-epimerase                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0386    f       355537     356487     prodigal   ribose-phosphate pyrophosphokinase                                                                                     TIGR          16     nd                nd                                       nd            nd          NR top hit: ribose-phosphate pyrophosphokinase [Carboxydothermus hydrogenoformans Z-2901] gb|ABB15901.1| ribose-phosphate pyrophosphokinase [Carboxydothermus hydrogenoformans Z-2901]                                                                                    SPTR: Ribose-phosphate pyrophosphokinase;                                                                                                                                               PFAM: phosphoribosyltransferase                                                                                                                                                                                                                      TIGRFAM: ribose-phosphate pyrophosphokinase                                                                                     KEGG: chy:CHY_0193 ribose-phosphate pyrophosphokinase                                                                                                                COGs: COG0462 Phosphoribosylpyrophosphate synthetase                                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0387    r       357037     356477     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: general secretion pathway protein J [Colwellia psychrerythraea 34H] gb|AAZ25918.1| general secretion pathway protein J [Colwellia psychrerythraea 34H]                                                                                                        SPTR: General secretion pathway protein J;                                                                                                                                              PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: cps:CPS_4585 general secretion pathway protein J                                                                                                               nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0388    r       357341     357015     prodigal   type II secretion system protein I                                                                                     KEGG          14     nd                nd                                       nd            nd          NR top hit: type II secretion system protein I [Xanthomonas axonopodis pv. citri str. 306] gb|AAM35589.1| type II secretion system protein I [Xanthomonas axonopodis pv. citri str. 306]                                                                                  SPTR: Type II secretion system protein I;                                                                                                                                               PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: xac:XAC0700 type II secretion system protein I                                                                                                                 nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0389    f       357371     358105     prodigal   pyridoxal phosphate biosynthetic protein PdxJ                                                                          TIGR          12     nd                nd                                       nd            nd          NR top hit: pyridoxal phosphate biosynthetic protein [Hydrogenivirga sp. 128-5-R1-1] gb|EDP76354.1| pyridoxal phosphate biosynthetic protein [Hydrogenivirga sp. 128-5-R1-1]                                                                                              SPTR: Pyridoxal phosphate biosynthetic protein;                                                                                                                                         PFAM: Pyridoxal phosphate biosynthetic protein PdxJ                                                                                                                                                                                                  TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ                                                                          KEGG: cyb:CYB_0455 pyridoxine 5'-phosphate synthase                                                                                                                  COGs: COG0854 Pyridoxal phosphate biosynthesis protein                                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0390    f       358108     358473     prodigal   4'-phosphopantetheinyl transferase                                                                                     PFAM          5      nd                nd                                       nd            nd          NR top hit: holo-[acyl-carrier-protein] synthase [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN98481.1| holo-[acyl-carrier-protein] synthase [Sulfurihydrogenibium azorense Az-Fu1]                                                                                        SPTR: Holo-[acyl-carrier-protein] synthase;                                                                                                                                             PFAM: 4'-phosphopantetheinyl transferase                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: saf:SULAZ_0185 holo-[acyl-carrier-protein] synthase                                                                                                            COGs: COG0736 Phosphopantetheinyl transferase (holo-ACP synthase)                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0391    r       358882     358445     prodigal   hemerythrin-like metal-binding protein                                                                                 TIGR          9      nd                nd                                       nd            nd          NR top hit: hypothetical protein SULAZ_0036 [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN98866.1| conserved hypothetical protein [Sulfurihydrogenibium azorense Az-Fu1]                                                                                                   SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: Hemerythrin HHE cation binding domain protein                                                                                                                                                                                                  TIGRFAM: hemerythrin-like metal-binding protein                                                                                 KEGG: saf:SULAZ_0036 hypothetical protein                                                                                                                            COGs: COG2703 Hemerythrin                                                                                                                                                                       
tam15698  08/20/2010  Contig31    Theam_0392    r       359239     359006     prodigal   acyl carrier protein                                                                                                   TIGR          5      nd                nd                                       nd            nd          NR top hit: acyl carrier protein [Chthoniobacter flavus Ellin428] gb|EDY20704.1| acyl carrier protein [Chthoniobacter flavus Ellin428]                                                                                                                                    SPTR: Acyl carrier protein;                                                                                                                                                             PFAM: phosphopantetheine-binding                                                                                                                                                                                                                     TIGRFAM: acyl carrier protein                                                                                                   KEGG: min:Minf_0431 acyl carrier protein                                                                                                                             COGs: COG0236 Acyl carrier protein                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0393    r       360018     359290     prodigal   3-oxoacyl-(acyl-carrier-protein) reductase                                                                             TIGR          9      nd                nd                                       nd            nd          NR top hit: 3-oxoacyl-(acyl-carrier-protein) reductase [Persephonella marina EX-H1] gb|ACO03991.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Persephonella marina EX-H1]                                                                                                SPTR: 3-oxoacyl-(Acyl-carrier-protein) reductase;                                                                                                                                       PFAM: short-chain dehydrogenase/reductase SDR                                                                                                                                                                                                        TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase                                                                             KEGG: pmx:PERMA_0507 3-oxoacyl-(acyl-carrier-protein) reductase                                                                                                      COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)                                                                                         
tam15698  08/20/2010  Contig31    Theam_0394    r       360525     360046     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein aq_1481 [Aquifex aeolicus VF5] gb|AAC07424.1| putative protein [Aquifex aeolicus VF5]                                                                                                                                                    SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: aae:aq_1481 hypothetical protein                                                                                                                               COGs: COG4711 membrane protein                                                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0395    f       360553     361233     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: thiol:disulfide interchange protein [Aquifex aeolicus VF5] gb|AAC07827.1| thiol:disulfide interchange protein [Aquifex aeolicus VF5]                                                                                                                          SPTR: Thiol:disulfide interchange protein;                                                                                                                                              PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: aae:aq_2093 thiol:disulfide interchange protein                                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0396    r       363589     361196     prodigal   diguanylate cyclase                                                                                                    TIGR          15     nd                nd                                       nd            nd          NR top hit: diguanylate cyclase/phosphodiesterase [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN99778.1| diguanylate cyclase/phosphodiesterase [Sulfurihydrogenibium azorense Az-Fu1]                                                                                      SPTR: Diguanylate cyclase/phosphodiesterase;                                                                                                                                            PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein                                                                                                                                               TIGRFAM: diguanylate cyclase                                                                                                    KEGG: saf:SULAZ_1249 diguanylate cyclase/phosphodiesterase                                                                                                           COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain                                                                                                
tam15698  08/20/2010  Contig31    Theam_0397    r       364260     363619     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: carbonic anhydrase-like protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gb|ABI69741.1| Carbonic anhydrase-like protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen]                                                                    SPTR: Carbonic anhydrase-like protein;                                                                                                                                                  PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: swo:Swol_2452 carbonic anhydrase-like protein                                                                                                                  nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0398    r       364742     364257     prodigal   phosphodiesterase; MJ0936 family                                                                                       TIGR          11     nd                nd                                       nd            nd          NR top hit: phosphodiesterase [Thermotoga petrophila RKU-1] ref|YP_001738754.1| phosphodiesterase [Thermotoga sp. RQ2] ref|ZP_05098018.1| phosphodiesterase; family [Marinitoga piezophila KA3] gb|ABQ46714.1| phosphodiesterase; MJ0936 family [Thermot-TRUNCATED-       SPTR: Phosphodiesterase; MJ0936 family;                                                                                                                                                 PFAM: metallophosphoesterase                                                                                                                                                                                                                         TIGRFAM: phosphodiesterase; MJ0936 family                                                                                       KEGG: trq:TRQ2_0718 phosphodiesterase                                                                                                                                COGs: COG0622 phosphoesterase                                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0399    r       366835     364739     prodigal   DNA topoisomerase I                                                                                                    TIGR          2      nd                nd                                       nd            nd          NR top hit: topoisomerase IA [Pelotomaculum thermopropionicum SI] dbj|BAF59427.1| topoisomerase IA [Pelotomaculum thermopropionicum SI]                                                                                                                                   SPTR: DNA topoisomerase;                                                                                                                                                                PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein                                                                                                         TIGRFAM: DNA topoisomerase I                                                                                                    KEGG: pth:PTH_1246 topoisomerase IA                                                                                                                                  COGs: COG0550 Topoisomerase IA                                                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0400    f       366948     368072     prodigal   Conserved TM helix repeat-containing protein                                                                           PFAM          11     nd                nd                                       nd            nd          NR top hit: TM helix protein [Psychrobacter cryohalolentis K5] gb|ABE76184.1| Conserved TM helix [Psychrobacter cryohalolentis K5]                                                                                                                                        SPTR: Conserved TM helix;                                                                                                                                                               PFAM: Conserved TM helix repeat-containing protein                                                                                                                                                                                                   TIGRFAM:                                                                                                                        KEGG: pcr:Pcryo_2407 TM helix protein                                                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0401    r       368737     368405     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: ATP-dependent chaperone ClpB [Truepera radiovictrix DSM 17093] gb|ADI13317.1| ATP-dependent chaperone ClpB [Truepera radiovictrix DSM 17093]                                                                                                                  SPTR: ATP-dependent chaperone ClpB;                                                                                                                                                     PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: tra:Trad_0176 ATP-dependent chaperone ClpB                                                                                                                     nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0403    f       369977     370483     prodigal   endodeoxyribonuclease RusA                                                                                             PFAM          11     nd                nd                                       nd            nd          NR top hit: crossover junction endodeoxyribonuclease RusA (Hollidayjunction nuclease rusA) (Holliday junction resolvase) [Persephonella marina EX-H1] gb|ACO03190.1| crossover junction endodeoxyribonuclease RusA (Hollidayjunction nucl-TRUNCATED-                      SPTR: Crossover junction endodeoxyribonuclease RusA (Hollidayjunction nuclease rusA) (Holliday junction resolvase);                                                                     PFAM: endodeoxyribonuclease RusA                                                                                                                                                                                                                     TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_0652 crossover junction endodeoxyribonuclease RusA (Holliday junction nuclease RusA) (Holliday junction resolvase)                                   nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0404    f       370473     372032     prodigal   HI0933 family protein                                                                                                  PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein CHY_2013 [Carboxydothermus hydrogenoformans Z-2901] gb|ABB15860.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans Z-2901]                                                                                             SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: HI0933 family protein                                                                                                                                                                                                                          TIGRFAM:                                                                                                                        KEGG: chy:CHY_2013 hypothetical protein                                                                                                                              COGs: COG2509 Uncharacterized FAD-dependent dehydrogenase                                                                                                                                       
tam15698  08/20/2010  Contig31    Theam_0405    r       373019     372021     prodigal   protein of unknown function DUF475                                                                                     PFAM          13     nd                nd                                       nd            nd          NR top hit: integral membrane protein [Caminibacter mediatlanticus TB-2] gb|EDM24635.1| integral membrane protein [Caminibacter mediatlanticus TB-2]                                                                                                                      SPTR: Integral membrane protein;                                                                                                                                                        PFAM: protein of unknown function DUF475                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: abu:Abu_1367 hypothetical protein                                                                                                                              COGs: COG2899 conserved hypothetical protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0406    r       374010     372994     prodigal   glycosyl transferase family 9                                                                                          PFAM          9      nd                nd                                       nd            nd          NR top hit: ADP-heptose:LPS heptosyltransferase [Persephonella marina EX-H1] gb|ACO04228.1| ADP-heptose:LPS heptosyltransferase [Persephonella marina EX-H1]                                                                                                              SPTR: ADP-heptose:LPS heptosyltransferase;                                                                                                                                              PFAM: glycosyl transferase family 9                                                                                                                                                                                                                  TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_0525 ADP-heptose:LPS heptosyltransferase                                                                                                             COGs: COG0859 ADP-heptose:LPS heptosyltransferase                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0407    r       374183     374007     prodigal   Rubredoxin-type Fe(Cys)4 protein                                                                                       PFAM          3      nd                nd                                       nd            nd          NR top hit: rubredoxin-type Fe(Cys)4 protein [Thermofilum pendens Hrk 5] gb|ABL78854.1| Rubredoxin-type Fe(Cys)4 protein [Thermofilum pendens Hrk 5]                                                                                                                      SPTR: Rubredoxin;                                                                                                                                                                       PFAM: Rubredoxin-type Fe(Cys)4 protein                                                                                                                                                                                                               TIGRFAM:                                                                                                                        KEGG: tpe:Tpen_1457 rubredoxin-type Fe(Cys)4 protein                                                                                                                 COGs: COG1773 Rubredoxin                                                                                                                                                                        
tam15698  08/20/2010  Contig31    Theam_0408    f       374270     374707     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein VOLCADRAFT_121587 [Volvox carteri f. nagariensis]                                                                                                                                                                                        SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: pno:SNOG_00987 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0409    f       374710     374997     prodigal   protein of unknown function DUF503                                                                                     PFAM          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein Haur_3704 [Herpetosiphon aurantiacus ATCC 23779] gb|ABX06340.1| protein of unknown function DUF503 [Herpetosiphon aurantiacus ATCC 23779]                                                                                                SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function DUF503                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: hau:Haur_3704 hypothetical protein                                                                                                                             COGs: COG1550 conserved hypothetical protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0410    f       375129     375710     prodigal   regulatory protein LuxR                                                                                                PFAM          15     nd                nd                                       nd            nd          NR top hit: transcriptional regulator; LuxR family [Geobacter sp. FRC-32] gb|ACM20950.1| transcriptional regulator; LuxR family [Geobacter sp. FRC-32]                                                                                                                    SPTR: Transcriptional regulator; LuxR family;                                                                                                                                           PFAM: regulatory protein LuxR                                                                                                                                                                                                                        TIGRFAM:                                                                                                                        KEGG: geo:Geob_2600 transcriptional regulator; LuxR family                                                                                                           COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain                                                                                           
tam15698  08/20/2010  Contig31    Theam_0411    r       376509     375685     prodigal   DNA polymerase III; delta prime subunit                                                                                KEGG          2      nd                nd                                       nd            nd          NR top hit: DNA polymerase III; delta prime subunit [Geobacter sulfurreducens PCA] gb|AAR35606.1| DNA polymerase III; delta prime subunit [Geobacter sulfurreducens PCA] gb|ADI84988.1| DNA polymerase III delta prime subunit [Geobacter sulfurr-TRUNCATED-              SPTR: DNA polymerase III; delta prime subunit;                                                                                                                                          PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: gsu:GSU2230 DNA polymerase III; delta prime subunit                                                                                                            COGs: COG2812 DNA polymerase III gamma/tau subunits                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0412    r       377114     376494     prodigal   thymidylate kinase                                                                                                     TIGR          16     nd                nd                                       nd            nd          NR top hit: thymidylate kinase [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN98450.1| thymidylate kinase [Sulfurihydrogenibium azorense Az-Fu1]                                                                                                                            SPTR: Thymidylate kinase;                                                                                                                                                               PFAM: thymidylate kinase                                                                                                                                                                                                                             TIGRFAM: thymidylate kinase                                                                                                     KEGG: saf:SULAZ_0257 thymidylate kinase                                                                                                                              COGs: COG0125 Thymidylate kinase                                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0413    r       378293     377115     prodigal   sodium/hydrogen exchanger                                                                                              PFAM          9      nd                nd                                       nd            nd          NR top hit: sodium/hydrogen exchanger [Persephonella marina EX-H1] gb|ACO03133.1| sodium/hydrogen exchanger [Persephonella marina EX-H1]                                                                                                                                  SPTR: Sodium/hydrogen exchanger;                                                                                                                                                        PFAM: sodium/hydrogen exchanger                                                                                                                                                                                                                      TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1094 sodium/hydrogen exchanger                                                                                                                       COGs: COG0475 Kef-type K+ transport systems membrane components                                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0414    r       378787     378293     prodigal   TrkA-C domain protein                                                                                                  PFAM          9      nd                nd                                       nd            nd          NR top hit: TrkA-C [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN99021.1| TrkA-C [Sulfurihydrogenibium azorense Az-Fu1]                                                                                                                                                    SPTR: TrkA-C;                                                                                                                                                                           PFAM: TrkA-C domain protein                                                                                                                                                                                                                          TIGRFAM:                                                                                                                        KEGG: saf:SULAZ_0946 TrkA-C                                                                                                                                          COGs: COG0490 Putative regulatory ligand-binding protein related to C-terminal domains of K+ channels                                                                                           
tam15698  08/20/2010  Contig31    Theam_0415    r       379393     378788     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: cytochrome c family protein [Sulfurihydrogenibium yellowstonense SS-5] gb|EEP60729.1| cytochrome c family protein [Sulfurihydrogenibium yellowstonense SS-5]                                                                                                  SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: sul:SYO3AOP1_0137 hypothetical protein                                                                                                                         nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0416    r       380198     379383     prodigal   Radical SAM domain protein                                                                                             PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein aq_1528 [Aquifex aeolicus VF5] gb|AAC07456.1| hypothetical protein aq_1528 [Aquifex aeolicus VF5]                                                                                                                                        SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: Radical SAM domain protein                                                                                                                                                                                                                     TIGRFAM:                                                                                                                        KEGG: aae:aq_1528 hypothetical protein                                                                                                                               COGs: COG0820 Fe-S-cluster redox enzyme                                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0417    r       381096     380182     prodigal   PSP1 domain protein                                                                                                    PFAM          13     nd                nd                                       nd            nd          NR top hit: Regulator of signaling phosphorelay (PSP1/tpl family) [Anoxybacillus flavithermus WK1] gb|ACJ32411.1| Regulator of signaling phosphorelay (PSP1/tpl family) [Anoxybacillus flavithermus WK1]                                                                  SPTR: Regulator of signaling phosphorelay (PSP1/tpl family);                                                                                                                            PFAM: PSP1 domain protein                                                                                                                                                                                                                            TIGRFAM:                                                                                                                        KEGG: afl:Aflv_0027 regulator of signaling phosphorelay (PSP1/tpl family)                                                                                            COGs: COG1774 Uncharacterized homolog of PSP1                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0418    f       381311     382687     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein Swoo_4755 [Shewanella woodyi ATCC 51908] gb|ACA89004.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908]                                                                                                                    SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: swd:Swoo_4755 hypothetical protein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0419    f       382764     383666     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: TPR repeat-containing protein [Thiomicrospira crunogena XCL-2] gb|ABB41118.1| Conserved hypothetical protein; predicted membrane protein with a TPR repeat domain [Thiomicrospira crunogena XCL-2]                                                            SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: tcx:Tcr_0522 TPR repeat-containing protein                                                                                                                     nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0420    f       383659     384168     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: TPR repeat-containing protein [Dictyoglomus turgidum DSM 6724] gb|ACK42658.1| TPR repeat-containing protein [Dictyoglomus turgidum DSM 6724]                                                                                                                  SPTR: TPR repeat-containing protein;                                                                                                                                                    PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dtu:Dtur_1384 TPR repeat-containing protein                                                                                                                    nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0421    f       384250     384813     prodigal   NapC/NirT cytochrome c domain protein membrane protein                                                                 PFAM          3      nd                nd                                       nd            nd          NR top hit: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [Persephonella marina EX-H1] gb|ACO04114.1| acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [Persephonella marina EX-H1]                                                    SPTR: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha;                                                                                                                 PFAM: NapC/NirT cytochrome c domain protein                                                                                                                                                                                                          TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1457 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha                                                                                COGs: COG3005 Nitrate/TMAO reductase membrane-bound tetraheme cytochrome c subunit                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0422    f       384841     385257     prodigal   hypothetical protein NapM cytC III family conserved domain                                                             KEGG          13     nd                Desulfovibrio desulfuricans              48            33          NR top hit: hypothetical protein SelinDRAFT_2495 [bacterium S5] gb|EFC64589.1| hypothetical protein SelinDRAFT_2495 [bacterium S5]                                                                                                                                        SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dap:Dacet_0085 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0423    f       385275     387923     prodigal   molybdopterin oxidoreductase                                                                                           PFAM          3      nd                nd                                       nd            nd          NR top hit: periplasmic nitrate reductase NapA [Deferribacter desulfuricans SSM1] dbj|BAI81275.1| periplasmic nitrate reductase NapA [Deferribacter desulfuricans SSM1]                                                                                                   SPTR: Periplasmic nitrate reductase NapA;                                                                                                                                               PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region                                                                                                                              TIGRFAM:                                                                                                                        KEGG: ddf:DEFDS_1820 periplasmic nitrate reductase NapA                                                                                                              COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing                                                                                                                       
tam15698  08/20/2010  Contig31    Theam_0424    f       388011     388376     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: assembly protein for periplasmic nitrate reductase [Haemophilus parainfluenzae T3T1]                                                                                                                                                                          SPTR: Putative napD protein;                                                                                                                                                            PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: msu:MS2282 NapD protein                                                                                                                                        nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0425    f       388357     389031     prodigal   ferredoxin-type protein NapG                                                                                           KEGG          3      nd                nd                                       nd            nd          NR top hit: ferredoxin-type protein napG [Photobacterium profundum SS9] emb|CAG22522.1| hypothetical ferredoxin-type protein napG [Photobacterium profundum SS9]                                                                                                          SPTR: Hypothetical ferredoxin-type protein napG;                                                                                                                                        PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: ppr:PBPRB0649 ferredoxin-type protein NapG                                                                                                                     nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0426    f       389043     389906     prodigal   NapH                                                                                                                   KEGG          3      nd                nd                                       nd            nd          NR top hit: NapH [Denitrovibrio acetiphilus DSM 12809] gb|ADD66895.1| NapH [Denitrovibrio acetiphilus DSM 12809]                                                                                                                                                          SPTR: NapH;                                                                                                                                                                             PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dap:Dacet_0089 NapH                                                                                                                                            COGs: COG0348 Polyferredoxin                                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0427    f       389989     390243     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein HY04AAS1_1020 [Hydrogenobaculum sp. Y04AAS1] gb|ACG57706.1| hypothetical protein HY04AAS1_1020 [Hydrogenobaculum sp. Y04AAS1]                                                                                                            SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: hya:HY04AAS1_1020 hypothetical protein                                                                                                                         nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0428    r       390965     390231     prodigal   transcriptional activator; Baf family                                                                                  TIGR          6      nd                nd                                       nd            nd          NR top hit: pantothenate kinase [Fervidobacterium nodosum Rt17-B1] sp|A7HM80.1|COAX_FERNB RecName: Full=Type III pantothenate kinase; AltName: Full=Pantothenic acid kinase; AltName: Full=PanK-III gb|ABS61013.1| putative transcriptional acitvat-TRUNCATED-            SPTR: Type III pantothenate kinase;                                                                                                                                                     PFAM: Bvg accessory factor                                                                                                                                                                                                                           TIGRFAM: transcriptional activator; Baf family                                                                                  KEGG: fno:Fnod_1166 pantothenate kinase                                                                                                                              COGs: COG1521 Putative transcriptional regulator protein                                                                                                                                        
tam15698  08/20/2010  Contig31    Theam_0429    r       392118     390946     prodigal   arginine biosynthesis bifunctional protein ArgJ                                                                        TIGR          10     nd                nd                                       nd            nd          NR top hit: arginine biosynthesis bifunctional protein ArgJ [Thermodesulfovibrio yellowstonii DSM 11347] gb|ACI22062.1| arginine biosynthesis bifunctional protein ArgJ [Thermodesulfovibrio yellowstonii DSM 11347]                                                      SPTR: Arginine biosynthesis bifunctional protein ArgJ;                                                                                                                                  PFAM: arginine biosynthesis protein ArgJ                                                                                                                                                                                                             TIGRFAM: arginine biosynthesis bifunctional protein ArgJ                                                                        KEGG: tye:THEYE_A1523 arginine biosynthesis bifunctional protein ArgJ                                                                                                COGs: COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase)                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0430    f       392178     393266     prodigal   tRNA (guanine-N1-)-methyltransferase                                                                                   PFAM          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein PF0678 [Pyrococcus furiosus DSM 3638] gb|AAL80802.1| hypothetical protein PF0678 [Pyrococcus furiosus DSM 3638]                                                                                                                          SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: tRNA (guanine-N1-)-methyltransferase                                                                                                                                                                                                           TIGRFAM:                                                                                                                        KEGG: pfu:PF0678 hypothetical protein                                                                                                                                COGs: COG2419 conserved hypothetical protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0431    f       393238     394149     prodigal   cysteine synthase                                                                                                      TIGR          10     nd                nd                                       nd            nd          NR top hit: cysteine synthase A [Dictyoglomus thermophilum H-6-12] gb|ACI19576.1| cysteine synthase A [Dictyoglomus thermophilum H-6-12]                                                                                                                                  SPTR: Cysteine synthase;                                                                                                                                                                PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit                                                                                                                                                                                          TIGRFAM: cysteine synthase; cysteine synthase A                                                                                 KEGG: dth:DICTH_1733 cysteine synthase A                                                                                                                             COGs: COG0031 Cysteine synthase                                                                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0432    f       394158     395159     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: possible 6-pyruvoyltetrahydropterin synthase [Chryseobacterium gleum ATCC 35910] gb|EFK32939.1| possible 6-pyruvoyltetrahydropterin synthase [Chryseobacterium gleum ATCC 35910]                                                                              SPTR: Putative fatty-acid--CoA ligase;                                                                                                                                                  PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: fal:FRAAL3512 putative fatty-acid--CoA ligase                                                                                                                  nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0433    r       395531     395151     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: thymidylate synthase; flavin-dependent [Mitsuokella multacida DSM 20544] gb|EEX68423.1| thymidylate synthase; flavin-dependent [Mitsuokella multacida DSM 20544]                                                                                              SPTR: Thymidylate synthase; flavin-dependent;                                                                                                                                           PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dhd:Dhaf_0400 FAD-dependent thymidylate synthase                                                                                                               nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0434    r       395739     395533     prodigal   ribosomal protein L31                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein L31 [Thermodesulfovibrio yellowstonii DSM 11347] sp|B5YIQ5.1|RL31_THEYD RecName: Full=50S ribosomal protein L31 gb|ACI20423.1| ribosomal protein L31 [Thermodesulfovibrio yellowstonii DSM 11347]                                           SPTR: 50S ribosomal protein L31;                                                                                                                                                        PFAM: ribosomal protein L31                                                                                                                                                                                                                          TIGRFAM: ribosomal protein L31                                                                                                  KEGG: tye:THEYE_A0367 ribosomal protein L31                                                                                                                          COGs: COG0254 Ribosomal protein L31                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0435    f       395811     396446     prodigal   SNARE associated Golgi protein                                                                                         PFAM          13     nd                nd                                       nd            nd          NR top hit: DedA family membrane protein [Clostridium botulinum A3 str. Loch Maree] gb|ACA53692.1| membrane protein; DedA family [Clostridium botulinum A3 str. Loch Maree]                                                                                               SPTR: Membrane protein; DedA family;                                                                                                                                                    PFAM: SNARE associated Golgi protein                                                                                                                                                                                                                 TIGRFAM:                                                                                                                        KEGG: cbl:CLK_2841 DedA family membrane protein                                                                                                                      COGs: COG0586 membrane-associated protein                                                                                                                                                       
tam15698  08/20/2010  Contig31    Theam_0436    f       396418     397212     prodigal   tryptophan synthase; alpha subunit                                                                                     TIGR          10     nd                nd                                       nd            nd          NR top hit: tryptophan synthase subunit alpha [Persephonella marina EX-H1] gb|ACO03694.1| tryptophan synthase; alpha subunit [Persephonella marina EX-H1]                                                                                                                 SPTR: Tryptophan synthase alpha chain;                                                                                                                                                  PFAM: tryptophan synthase alpha chain                                                                                                                                                                                                                TIGRFAM: tryptophan synthase; alpha subunit                                                                                     KEGG: pmx:PERMA_1327 tryptophan synthase subunit alpha                                                                                                               COGs: COG0159 Tryptophan synthase alpha chain                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0437    f       397235     397474     prodigal   twin-arginine translocation protein; TatA/E family subunit                                                             TIGR          9      nd                nd                                       nd            nd          NR top hit: twin-arginine translocation protein; TatB subunit [Desulfomicrobium baculatum DSM 4028] gb|ACU90574.1| twin-arginine translocation protein; TatB subunit [Desulfomicrobium baculatum DSM 4028]                                                                SPTR: Twin-arginine translocation protein; TatB subunit;                                                                                                                                PFAM: sec-independent translocation protein mttA/Hcf106                                                                                                                                                                                              TIGRFAM: twin-arginine translocation protein; TatA/E family subunit                                                             KEGG: dba:Dbac_2495 twin-arginine translocation protein; TatB subunit                                                                                                COGs: COG1826 Sec-independent protein secretion pathway components                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0438    f       397476     398234     prodigal   Sec-independent protein translocase; TatC subunit                                                                      TIGR          9      nd                nd                                       nd            nd          NR top hit: sec-independent protein translocase protein [Syntrophus aciditrophicus SB] gb|ABC78846.1| sec-independent protein translocase protein [Syntrophus aciditrophicus SB]                                                                                          SPTR: Sec-independent protein translocase protein;                                                                                                                                      PFAM: Sec-independent periplasmic protein translocase                                                                                                                                                                                                TIGRFAM: Sec-independent protein translocase; TatC subunit                                                                      KEGG: sat:SYN_00305 sec-independent protein translocase protein                                                                                                      COGs: COG0805 Sec-independent protein secretion pathway component TatC                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0439    f       398264     399535     prodigal   transcription termination factor Rho                                                                                   TIGR          6      nd                nd                                       nd            nd          NR top hit: transcription termination factor Rho [Aquifex aeolicus VF5] sp|O67031.1|RHO_AQUAE RecName: Full=Transcription termination factor rho; AltName: Full=ATP-dependent helicase rho gb|AAC06989.1| transcriptional terminator Rho [Aquifex aeol-TRUNCATED-         SPTR: Transcription termination factor rho;                                                                                                                                             PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein                                                                                                  TIGRFAM: transcription termination factor Rho                                                                                   KEGG: aae:aq_873 transcription termination factor Rho                                                                                                                COGs: COG1158 Transcription termination factor                                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0440    f       399532     400140     prodigal   phosphoheptose isomerase                                                                                               TIGR          4      nd                nd                                       nd            nd          NR top hit: phosphoheptose isomerase [Persephonella marina EX-H1] gb|ACO03881.1| phosphoheptose isomerase [Persephonella marina EX-H1]                                                                                                                                    SPTR: Phosphoheptose isomerase;                                                                                                                                                         PFAM: sugar isomerase (SIS)                                                                                                                                                                                                                          TIGRFAM: phosphoheptose isomerase                                                                                               KEGG: pmx:PERMA_1830 phosphoheptose isomerase                                                                                                                        COGs: COG0279 Phosphoheptose isomerase                                                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0441    f       400217     401011     prodigal   predicted phospho-2-dehydro-3-deoxyheptonate aldolase                                                                  TIGR          4      nd                nd                                       nd            nd          NR top hit: fructose-bisphosphate aldolase [Aquifex aeolicus VF5] sp|O67506.1|Y1554_AQUAE RecName: Full=Uncharacterized aldolase aq_1554 gb|AAC07474.1| hypothetical protein aq_1554 [Aquifex aeolicus VF5]                                                               SPTR: Uncharacterized aldolase aq_1554;                                                                                                                                                 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase                                                                                                                                                                     TIGRFAM: predicted phospho-2-dehydro-3-deoxyheptonate aldolase                                                                  KEGG: aae:aq_1554 fructose-bisphosphate aldolase                                                                                                                     COGs: COG1830 DhnA-type fructose-1 6-bisphosphate aldolase                                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0442    r       402712     401030     prodigal   Radical SAM domain protein                                                                                             PFAM          3      nd                nd                                       nd            nd          NR top hit: radical SAM domain-containing protein [Methanohalobium evestigatum Z-7303] gb|ADI74237.1| Radical SAM domain protein [Methanohalobium evestigatum Z-7303]                                                                                                     SPTR: Radical SAM domain protein;                                                                                                                                                       PFAM: Radical SAM domain protein                                                                                                                                                                                                                     TIGRFAM:                                                                                                                        KEGG: mev:Metev_1381 radical SAM domain-containing protein                                                                                                           COGs: COG1031 Fe-S oxidoreductase                                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0443    r       403862     402693     prodigal   sodium/hydrogen exchanger                                                                                              PFAM          9      nd                nd                                       nd            nd          NR top hit: NA(+)/H(+) antiporter [Hydrogenivirga sp. 128-5-R1-1] gb|EDP76244.1| NA(+)/H(+) antiporter [Hydrogenivirga sp. 128-5-R1-1]                                                                                                                                    SPTR: NA(+)/H(+) antiporter;                                                                                                                                                            PFAM: sodium/hydrogen exchanger                                                                                                                                                                                                                      TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_0591 hypothetical protein                                                                                                                            COGs: COG0475 Kef-type K+ transport systems membrane components                                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0444    r       405267     403864     prodigal   TrkA-N domain protein                                                                                                  PFAM          9      nd                nd                                       nd            nd          NR top hit: TrkA-N domain family protein [Persephonella marina EX-H1] gb|ACO04026.1| TrkA-N domain family protein [Persephonella marina EX-H1]                                                                                                                            SPTR: TrkA-N domain family protein;                                                                                                                                                     PFAM: TrkA-N domain protein; TrkA-C domain protein; UspA domain-containing protein                                                                                                                                                                   TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_0592 TrkA-N domain family protein                                                                                                                    COGs: COG0569 K+ transport systems NAD-binding component                                                                                                                                        
tam15698  08/20/2010  Contig31    Theam_0445    f       405423     406157     prodigal   ABC transporter related                                                                                                PFAM          9      nd                nd                                       nd            nd          NR top hit: ABC transporter related [Methanocaldococcus fervens AG86] gb|ACV25044.1| ABC transporter related [Methanocaldococcus fervens AG86]                                                                                                                            SPTR: ABC transporter related;                                                                                                                                                          PFAM: ABC transporter related                                                                                                                                                                                                                        TIGRFAM:                                                                                                                        KEGG: mfe:Mefer_1235 ABC transporter related                                                                                                                         COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0446    f       406157     407107     prodigal   SufBD protein                                                                                                          PFAM          9      nd                nd                                       nd            nd          NR top hit: SufBD protein [Halothermothrix orenii H 168] gb|ACL70559.1| SufBD protein [Halothermothrix orenii H 168]                                                                                                                                                      SPTR: SufBD protein;                                                                                                                                                                    PFAM: SufBD protein                                                                                                                                                                                                                                  TIGRFAM:                                                                                                                        KEGG: hor:Hore_18100 SufBD protein                                                                                                                                   COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0447    f       407132     407467     prodigal   Desulfoferrodoxin ferrous iron-binding region                                                                          PFAM          3      nd                nd                                       nd            nd          NR top hit: desulfoferrodoxin ferrous iron-binding region [Fervidobacterium nodosum Rt17-B1] gb|ABS60333.1| Desulfoferrodoxin ferrous iron-binding region [Fervidobacterium nodosum Rt17-B1]                                                                              SPTR: Desulfoferrodoxin ferrous iron-binding region;                                                                                                                                    PFAM: Desulfoferrodoxin ferrous iron-binding region                                                                                                                                                                                                  TIGRFAM:                                                                                                                        KEGG: fno:Fnod_0468 desulfoferrodoxin ferrous iron-binding region                                                                                                    COGs: COG2033 Desulfoferrodoxin                                                                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0448    r       408086     407445     prodigal   riboflavin synthase; alpha subunit                                                                                     TIGR          12     nd                nd                                       nd            nd          NR top hit: riboflavin synthase alpha chain [Hydrogenobacter thermophilus TK-6] dbj|BAI68835.1| riboflavin synthase alpha chain [Hydrogenobacter thermophilus TK-6]                                                                                                       SPTR: Riboflavin synthase alpha chain;                                                                                                                                                  PFAM: Lumazine-binding protein                                                                                                                                                                                                                       TIGRFAM: riboflavin synthase; alpha subunit                                                                                     KEGG: hth:HTH_0369 riboflavin synthase alpha chain                                                                                                                   COGs: COG0307 Riboflavin synthase alpha chain                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0449    f       408138     409049     prodigal   Ppx/GppA phosphatase                                                                                                   PFAM          16     nd                nd                                       nd            nd          NR top hit: exopolyphosphatase [Hydrogenivirga sp. 128-5-R1-1] gb|EDP76679.1| exopolyphosphatase [Hydrogenivirga sp. 128-5-R1-1]                                                                                                                                          SPTR: Exopolyphosphatase;                                                                                                                                                               PFAM: Ppx/GppA phosphatase                                                                                                                                                                                                                           TIGRFAM:                                                                                                                        KEGG: sul:SYO3AOP1_0810 Ppx/GppA phosphatase                                                                                                                         COGs: COG0248 Exopolyphosphatase                                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0450    f       409043     410380     prodigal   nucleotide sugar dehydrogenase                                                                                         TIGR          9      nd                nd                                       nd            nd          NR top hit: nucleotide sugar dehydrogenase [Chloroflexus aurantiacus J-10-fl] ref|YP_002570792.1| nucleotide sugar dehydrogenase [Chloroflexus sp. Y-400-fl] gb|ABY36051.1| nucleotide sugar dehydrogenase [Chloroflexus aurantiacus J-10-fl] gb|ACM5446-TRUNCATED-       SPTR: Nucleotide sugar dehydrogenase;                                                                                                                                                   PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase                                                                                                               TIGRFAM: nucleotide sugar dehydrogenase                                                                                         KEGG: chl:Chy400_3087 nucleotide sugar dehydrogenase                                                                                                                 COGs: COG1004 UDP-glucose 6-dehydrogenase                                                                                                                                                       
tam15698  08/20/2010  Contig31    Theam_0451    f       410381     411004     prodigal   CDP-alcohol phosphatidyltransferase                                                                                    PFAM          5      nd                nd                                       nd            nd          NR top hit: selenocysteine synthase [Hydrogenivirga sp. 128-5-R1-1] gb|EDP75153.1| selenocysteine synthase [Hydrogenivirga sp. 128-5-R1-1]                                                                                                                                SPTR: Selenocysteine synthase;                                                                                                                                                          PFAM: CDP-alcohol phosphatidyltransferase                                                                                                                                                                                                            TIGRFAM:                                                                                                                        KEGG: aae:aq_1244 hypothetical protein                                                                                                                               COGs: COG0558 Phosphatidylglycerophosphate synthase                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0452    f       411006     411668     prodigal   2;5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1-reductase                                                  TIGR          12     nd                nd                                       nd            nd          NR top hit: riboflavin specific deaminase [Hydrogenivirga sp. 128-5-R1-1] gb|EDP75152.1| riboflavin specific deaminase [Hydrogenivirga sp. 128-5-R1-1]                                                                                                                    SPTR: Riboflavin specific deaminase;                                                                                                                                                    PFAM: bifunctional deaminase-reductase domain protein                                                                                                                                                                                                TIGRFAM: 2;5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1-reductase                                                  KEGG: aae:aq_436 riboflavin specific deaminase                                                                                                                       COGs: COG1985 Pyrimidine reductase riboflavin biosynthesis                                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0453    f       411672     412661     prodigal   binding-protein-dependent transport systems inner membrane component                                                   PFAM          10     nd                nd                                       nd            nd          NR top hit: oligopeptide transport system permease protein AppB [Persephonella marina EX-H1] gb|ACO04361.1| oligopeptide transport system permease protein AppB [Persephonella marina EX-H1]                                                                              SPTR: Oligopeptide transport system permease protein AppB;                                                                                                                              PFAM: binding-protein-dependent transport systems inner membrane component                                                                                                                                                                           TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1039 oligopeptide transport system permease protein AppB                                                                                             COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0454    f       412651     413721     prodigal   binding-protein-dependent transport systems inner membrane component                                                   PFAM          10     nd                nd                                       nd            nd          NR top hit: oligopeptide transport system permease protein AppC [Persephonella marina EX-H1] gb|ACO02991.1| oligopeptide transport system permease protein AppC [Persephonella marina EX-H1]                                                                              SPTR: Oligopeptide transport system permease protein AppC;                                                                                                                              PFAM: binding-protein-dependent transport systems inner membrane component                                                                                                                                                                           TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1038 oligopeptide transport system permease protein AppC                                                                                             COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0455    f       413723     414802     prodigal   phospho-N-acetylmuramoyl-pentapeptide-transferase                                                                      TIGR          9      nd                nd                                       nd            nd          NR top hit: phospho-N-acetylmuramoyl-pentapeptide-transferase [Geobacter sp. M18] gb|EET36642.1| phospho-N-acetylmuramoyl-pentapeptide-transferase [Geobacter sp. M18]                                                                                                    SPTR: Phospho-N-acetylmuramoyl-pentapeptide-transferase;                                                                                                                                PFAM: Glycosyl transferase; family 4; conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase; conserved site                                                                                                                            TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase                                                                      KEGG: gbm:Gbem_0488 phospho-N-acetylmuramoyl-pentapeptide-transferase                                                                                                COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase                                                                              
tam15698  08/20/2010  Contig31    Theam_0456    r       415093     414755     prodigal   regulatory protein ArsR                                                                                                PFAM          11     nd                nd                                       nd            nd          NR top hit: ArsR family transcriptional regulator [Thermococcus kodakarensis KOD1] dbj|BAD85230.1| transcription regulator; ArsR family [Thermococcus kodakarensis KOD1]                                                                                                  SPTR: Transcription regulator; ArsR family;                                                                                                                                             PFAM: regulatory protein ArsR                                                                                                                                                                                                                        TIGRFAM:                                                                                                                        KEGG: tko:TK1041 ArsR family transcriptional regulator                                                                                                               nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0457    f       415144     415794     prodigal   serine O-acetyltransferase                                                                                             TIGR          10     nd                nd                                       nd            nd          NR top hit: serine O-acetyltransferase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gb|ADH61628.1| serine O-acetyltransferase [Thermoanaerobacter mathranii subsp. mathranii str. A3]                                                                          SPTR: Serine O-acetyltransferase;                                                                                                                                                       PFAM: transferase hexapeptide repeat containing protein                                                                                                                                                                                              TIGRFAM: serine O-acetyltransferase                                                                                             KEGG: tmt:Tmath_1941 serine O-acetyltransferase                                                                                                                      COGs: COG1045 Serine acetyltransferase                                                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0458    f       415791     416738     prodigal   Sporulation domain-containing protein                                                                                  PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein aq_1689 [Aquifex aeolicus VF5] gb|AAC07561.1| putative protein [Aquifex aeolicus VF5]                                                                                                                                                    SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: Sporulation domain-containing protein                                                                                                                                                                                                          TIGRFAM:                                                                                                                        KEGG: aae:aq_1689 hypothetical protein                                                                                                                               nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0459    r       417757     416750     prodigal   ketol-acid reductoisomerase                                                                                            TIGR          10     nd                nd                                       nd            nd          NR top hit: ketol-acid reductoisomerase [Persephonella marina EX-H1] sp|C0QTD8.1|ILVC_PERMH RecName: Full=Ketol-acid reductoisomerase; AltName: Full=Acetohydroxy-acid isomeroreductase; AltName: Full=Alpha-keto-beta-hydroxylacil reductoiso-TRUNCATED-                 SPTR: Ketol-acid reductoisomerase;                                                                                                                                                      PFAM: Acetohydroxy acid isomeroreductase catalytic domain-containing protein; acetohydroxy acid isomeroreductase                                                                                                                                     TIGRFAM: ketol-acid reductoisomerase                                                                                            KEGG: pmx:PERMA_0155 ketol-acid reductoisomerase                                                                                                                     COGs: COG0059 Ketol-acid reductoisomerase                                                                                                                                                       
tam15698  08/20/2010  Contig31    Theam_0460    r       418297     417779     prodigal   acetolactate synthase; small subunit                                                                                   TIGR          10     nd                nd                                       nd            nd          NR top hit: acetolactate synthase; small subunit [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN99499.1| acetolactate synthase; small subunit [Sulfurihydrogenibium azorense Az-Fu1]                                                                                        SPTR: Acetolactate synthase; small subunit;                                                                                                                                             PFAM: Acetolactate synthase; small subunit-like; amino acid-binding ACT domain protein                                                                                                                                                               TIGRFAM: acetolactate synthase; small subunit                                                                                   KEGG: saf:SULAZ_0083 acetolactate synthase; small subunit                                                                                                            COGs: COG0440 Acetolactate synthase small (regulatory) subunit                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0461    r       420046     418307     prodigal   acetolactate synthase; large subunit; biosynthetic type                                                                TIGR          10     nd                nd                                       nd            nd          NR top hit: acetolactate synthase large subunit [Hydrogenobacter thermophilus TK-6] dbj|BAI69098.1| acetolactate synthase large subunit [Hydrogenobacter thermophilus TK-6]                                                                                               SPTR: Acetolactate synthase;                                                                                                                                                            PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein                                                                                                                         TIGRFAM: acetolactate synthase; large subunit; biosynthetic type                                                                KEGG: hth:HTH_0637 acetolactate synthase large subunit                                                                                                               COGs: COG0028 Thiamine pyrophosphate-requiring protein                                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0462    f       420134     421420     prodigal   Anthranilate synthase                                                                                                  PRIAM         10     nd                nd                                       nd            nd          NR top hit: Para-aminobenzoate synthase component 1 [Bacillus cereus MM3] gb|EEK69805.1| Para-aminobenzoate synthase component 1 [Bacillus cereus MM3]                                                                                                                    SPTR: Para-aminobenzoate synthase component 1;                                                                                                                                          PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein                                                                                                                                                                      TIGRFAM:                                                                                                                        KEGG: bcq:BCQ_0078 anthranilate synthase; component I (para-aminobenzoate synthase)                                                                                  COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0463    r       421654     421421     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein Thal_0329 [Thermocrinis albus DSM 14484] gb|ADC88964.1| hypothetical protein Thal_0329 [Thermocrinis albus DSM 14484]                                                                                                                    SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: tal:Thal_0329 hypothetical protein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0464    r       422559     421726     prodigal   KpsF/GutQ family protein                                                                                               TIGR          9      nd                nd                                       nd            nd          NR top hit: arabinose 5-phosphate isomerase [Persephonella marina EX-H1] gb|ACO03325.1| arabinose 5-phosphate isomerase [Persephonella marina EX-H1]                                                                                                                      SPTR: Arabinose 5-phosphate isomerase;                                                                                                                                                  PFAM: sugar isomerase (SIS); CBS domain containing protein                                                                                                                                                                                           TIGRFAM: KpsF/GutQ family protein                                                                                               KEGG: pmx:PERMA_0165 arabinose 5-phosphate isomerase                                                                                                                 COGs: COG0794 sugar phosphate isomerase involved in capsule formation                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0465    r       423505     422609     prodigal   peptidase M48 Ste24p                                                                                                   PFAM          11     nd                nd                                       nd            nd          NR top hit: peptidase M48 Ste24p [Sideroxydans lithotrophicus ES-1] gb|ADE10586.1| peptidase M48 Ste24p [Sideroxydans lithotrophicus ES-1]                                                                                                                                SPTR: Peptidase M48 Ste24p;                                                                                                                                                             PFAM: peptidase M48 Ste24p                                                                                                                                                                                                                           TIGRFAM:                                                                                                                        KEGG: slt:Slit_0344 peptidase M48 Ste24p                                                                                                                             COGs: COG4783 Putative Zn-dependent protease contains TPR repeats                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0466    f       423538     424836     prodigal   RNA polymerase sigma-54 factor; RpoN                                                                                   TIGR          6      nd                nd                                       nd            nd          NR top hit: RNA polymerase; sigma 54 subunit; RpoN [Halothermothrix orenii H 168] gb|ACL70334.1| RNA polymerase; sigma 54 subunit; RpoN [Halothermothrix orenii H 168]                                                                                                    SPTR: RNA polymerase; sigma 54 subunit; RpoN;                                                                                                                                           PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region                                                                                                                                                                       TIGRFAM: RNA polymerase sigma-54 factor; RpoN                                                                                   KEGG: hor:Hore_15850 RNA polymerase; sigma 54 subunit; RpoN                                                                                                          COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0467    f       424833     427484     prodigal   [Glutamate--ammonia-ligase] adenylyltransferase                                                                        PRIAM         9      nd                nd                                       nd            nd          NR top hit: glutamate ammonia ligase adenylyl-transferase [Persephonella marina EX-H1] gb|ACO03077.1| glutamate ammonia ligase adenylyl-transferase [Persephonella marina EX-H1]                                                                                          SPTR: Glutamate ammonia ligase adenylyl-transferase;                                                                                                                                    PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase                                                                                                                                                                     TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_0170 glutamate ammonia ligase adenylyl-transferase                                                                                                   COGs: COG1391 Glutamine synthetase adenylyltransferase                                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0468    f       427460     428065     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein NECHADRAFT_31804 [Nectria haematococca mpVI 77-13-4]                                                                                                                                                                                     SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: ehi:EHI_138050 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0469    f       428031     428705     prodigal   tyrosine protein kinase                                                                                                KEGG          15     nd                nd                                       nd            nd          NR top hit: tyrosine protein kinase [Methanocaldococcus vulcanius M7] gb|ACX72028.1| tyrosine protein kinase [Methanocaldococcus vulcanius M7]                                                                                                                            SPTR: Tyrosine protein kinase;                                                                                                                                                          PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: mvu:Metvu_0161 tyrosine protein kinase                                                                                                                         COGs: COG2112 Ser/Thr protein kinase                                                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0470    f       428768     428929     prodigal   ribosomal protein L34                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein L34 [Thermomicrobium roseum DSM 5159] gb|ACM06131.1| ribosomal protein L34 [Thermomicrobium roseum DSM 5159]                                                                                                                                SPTR: 50S ribosomal protein L34;                                                                                                                                                        PFAM: ribosomal protein L34                                                                                                                                                                                                                          TIGRFAM: ribosomal protein L34                                                                                                  KEGG: tro:trd_1088 ribosomal protein L34                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0471    f       428914     429282     prodigal   ribonuclease P protein component                                                                                       TIGR          7      nd                nd                                       nd            nd          NR top hit: RNase P protein component [Pelotomaculum thermopropionicum SI] sp|A5CY49.1|RNPA_PELTS RecName: Full=Ribonuclease P protein component; Short=RNaseP protein; Short=RNase P protein; AltName: Full=Protein C5 dbj|BAF61101.1| RNase P pro-TRUNCATED-            SPTR: Ribonuclease P protein component;                                                                                                                                                 PFAM: ribonuclease P protein                                                                                                                                                                                                                         TIGRFAM: ribonuclease P protein component                                                                                       KEGG: pth:PTH_2920 RNase P protein component                                                                                                                         COGs: COG0594 RNase P protein component                                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0472    f       429279     429485     prodigal   protein of unknown function DUF37                                                                                      PFAM          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein SULAZ_0536 [Sulfurihydrogenibium azorense Az-Fu1] gb|ABG23483.1| YidD [Sulfurihydrogenibium azorense] gb|ACN99059.1| conserved hypothetical protein [Sulfurihydrogenibium azorense Az-Fu1]                                               SPTR: UPF0161 protein SULAZ_0536;                                                                                                                                                       PFAM: protein of unknown function DUF37                                                                                                                                                                                                              TIGRFAM:                                                                                                                        KEGG: saf:SULAZ_0536 hypothetical protein                                                                                                                            COGs: COG0759 conserved hypothetical protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0473    f       429496     430968     prodigal   membrane protein insertase; YidC/Oxa1 family                                                                           TIGR          9      nd                nd                                       nd            nd          NR top hit: 60 kDa inner-membrane protein [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN98518.1| 60 kDa inner-membrane protein [Sulfurihydrogenibium azorense Az-Fu1]                                                                                                      SPTR: 60 kDa inner-membrane protein;                                                                                                                                                    PFAM: 60 kDa inner membrane insertion protein                                                                                                                                                                                                        TIGRFAM: membrane protein insertase; YidC/Oxa1 family; membrane protein insertase; YidC/Oxa1 family domain containing           KEGG: saf:SULAZ_0535 60 kDa inner-membrane protein                                                                                                                   COGs: COG0706 Preprotein translocase subunit YidC                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0474    f       430974     432245     prodigal   protein of unknown function DUF21                                                                                      PFAM          11     nd                nd                                       nd            nd          NR top hit: hemolysin homolog protein [Aquifex aeolicus VF5] gb|AAC07855.1| hemolysin homolog protein [Aquifex aeolicus VF5]                                                                                                                                              SPTR: Hemolysin homolog protein;                                                                                                                                                        PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: aae:aq_2120 hemolysin homolog protein                                                                                                                          COGs: COG1253 Hemolysins and related protein containing CBS domains                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0475    f       432245     433495     prodigal   protein of unknown function DUF21                                                                                      PFAM          11     nd                nd                                       nd            nd          NR top hit: protein of unknown function DUF21 [Haliangium ochraceum DSM 14365] gb|ACY15094.1| protein of unknown function DUF21 [Haliangium ochraceum DSM 14365]                                                                                                          SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: hoh:Hoch_2560 protein of unknown function DUF21                                                                                                                COGs: COG1253 Hemolysins and related protein containing CBS domains                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0476    r       434257     433847     prodigal   NADH-ubiquinone oxidoreductase 23 kda subunit                                                                          KEGG          3      nd                nd                                       nd            nd          NR top hit: NADH-ubiquinone oxidoreductase 23 kda subunit [Nautilia profundicola AmH] gb|ACM92960.1| NADH-ubiquinone oxidoreductase 23 kda subunit [Nautilia profundicola AmH]                                                                                            SPTR: NADH-ubiquinone oxidoreductase 23 kDa subunit;                                                                                                                                    PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: nam:NAMH_0635 NADH-ubiquinone oxidoreductase 23 kda subunit                                                                                                    COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)                                                                                            
tam15698  08/20/2010  Contig31    Theam_0477    r       434556     434254     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein CMTB2_07306 [Caminibacter mediatlanticus TB-2] gb|EDM24043.1| hypothetical protein CMTB2_07306 [Caminibacter mediatlanticus TB-2]                                                                                                        SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: hms:HMU06290 hypothetical protein                                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0478    r       435664     434579     prodigal   NADH dehydrogenase (quinone)                                                                                           PRIAM         3      nd                nd                                       nd            nd          NR top hit: Ech Hydrogenase; Subunit [Nautilia profundicola AmH] gb|ACM92209.1| Ech Hydrogenase; Subunit [Nautilia profundicola AmH]                                                                                                                                      SPTR: Ech Hydrogenase; Subunit;                                                                                                                                                         PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; nickel-dependent hydrogenase large subunit                                                                                                                                                         TIGRFAM:                                                                                                                        KEGG: nam:NAMH_0634 Ech hydrogenase; subunit                                                                                                                         COGs: COG3261 Ni Fe-hydrogenase III large subunit                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0479    r       436010     435666     prodigal   putative F420H2:quinone oxidoreductase; 39.7 kDa subunit                                                               KEGG          11     nd                nd                                       nd            nd          NR top hit: putative F420H2:quinone oxidoreductase; 39.7 kDa subunit [Nautilia profundicola AmH] gb|ACM93199.1| putative F420H2:quinone oxidoreductase; 39.7 kDa subunit [Nautilia profundicola AmH]                                                                      SPTR: Putative F420H2:quinone oxidoreductase; 39.7 kDa subunit;                                                                                                                         PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: nam:NAMH_0633 putative F420H2:quinone oxidoreductase; 39.7 kDa subunit                                                                                         nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0480    r       436524     435991     prodigal   NADH ubiquinone oxidoreductase 20 kDa subunit                                                                          PFAM          3      nd                nd                                       nd            nd          NR top hit: hydrogenase-4 component I [Campylobacterales bacterium GD 1] gb|EDZ61485.1| hydrogenase-4 component I [Campylobacterales bacterium GD 1]                                                                                                                      SPTR: Hydrogenase-4 component I;                                                                                                                                                        PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit                                                                                                                                                                                                  TIGRFAM:                                                                                                                        KEGG: nam:NAMH_0632 hydrogenase-4 component I                                                                                                                        COGs: COG3260 Ni Fe-hydrogenase III small subunit                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0481    r       437367     436525     prodigal   respiratory-chain NADH dehydrogenase subunit 1                                                                         PFAM          3      nd                nd                                       nd            nd          NR top hit: EchB [Nautilia profundicola AmH] gb|ACM93637.1| EchB [Nautilia profundicola AmH]                                                                                                                                                                              SPTR: EchB;                                                                                                                                                                             PFAM: respiratory-chain NADH dehydrogenase subunit 1                                                                                                                                                                                                 TIGRFAM:                                                                                                                        KEGG: nam:NAMH_0631 EchB                                                                                                                                             COGs: COG0650 Formate hydrogenlyase subunit 4                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0482    r       439223     437364     prodigal   NADH/Ubiquinone/plastoquinone (complex I)                                                                              PFAM          3      nd                nd                                       nd            nd          NR top hit: hydrogenase; EchA subunit [Nautilia profundicola AmH] gb|ACM92256.1| hydrogenase; EchA subunit [Nautilia profundicola AmH]                                                                                                                                    SPTR: Hydrogenase; EchA subunit;                                                                                                                                                        PFAM: NADH/Ubiquinone/plastoquinone (complex I)                                                                                                                                                                                                      TIGRFAM:                                                                                                                        KEGG: nam:NAMH_0630 hydrogenase; EchA subunit                                                                                                                        COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit                                                                                    
tam15698  08/20/2010  Contig31    Theam_0483    r       439696     439211     prodigal   cyclic nucleotide-binding                                                                                              PFAM          15     nd                nd                                       nd            nd          NR top hit: cyclic nucleotide-binding:Bacterial regulatory protein; Crp [Stigmatella aurantiaca DW4/3-1] gb|EAU64372.1| cyclic nucleotide-binding:Bacterial regulatory protein; Crp [Stigmatella aurantiaca DW4/3-1]                                                      SPTR: Cyclic nucleotide-binding:Bacterial regulatory protein; Crp;                                                                                                                      PFAM: cyclic nucleotide-binding                                                                                                                                                                                                                      TIGRFAM:                                                                                                                        KEGG: gme:Gmet_0092 Crp/FNR family transcriptional regulator                                                                                                         COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase                                                                          
tam15698  08/20/2010  Contig31    Theam_0484    r       441000     439759     prodigal   nickel-dependent hydrogenase large subunit                                                                             PFAM          3      nd                nd                                       nd            nd          NR top hit: nickel-dependent hydrogenase large subunit [Nitrosococcus halophilus Nc4] gb|ADE14678.1| nickel-dependent hydrogenase large subunit [Nitrosococcus halophilus Nc4]                                                                                            SPTR: Nickel-dependent hydrogenase large subunit;                                                                                                                                       PFAM: nickel-dependent hydrogenase large subunit                                                                                                                                                                                                     TIGRFAM:                                                                                                                        KEGG: nhl:Nhal_1537 nickel-dependent hydrogenase large subunit                                                                                                       COGs: COG3259 Coenzyme F420-reducing hydrogenase alpha subunit                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0485    r       441757     440984     prodigal   NADH ubiquinone oxidoreductase 20 kDa subunit                                                                          PFAM          3      nd                nd                                       nd            nd          NR top hit: cytochrome-c3 hydrogenase delta chain [Pyrococcus abyssi GE5] emb|CAB49780.1| hydD-1 cytochrome-c3 hydrogenase delta chain [Pyrococcus abyssi GE5]                                                                                                            SPTR: HydD-1 cytochrome-c3 hydrogenase delta chain;                                                                                                                                     PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit                                                                                                                                                                                                  TIGRFAM:                                                                                                                        KEGG: pab:PAB1786 cytochrome-c3 hydrogenase delta chain                                                                                                              COGs: COG1941 Coenzyme F420-reducing hydrogenase gamma subunit                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0486    r       442636     441758     prodigal   Dihydroorotate dehydrogenase; electron transfer subunit; iron-sulphur cluster binding domain                           PFAM          12     nd                nd                                       nd            nd          NR top hit: oxidoreductase FAD/NAD(P)-binding domain protein [Eggerthella lenta DSM 2243] gb|ACV55224.1| oxidoreductase FAD/NAD(P)-binding domain protein [Eggerthella lenta DSM 2243]                                                                                    SPTR: Oxidoreductase FAD/NAD(P)-binding domain protein;                                                                                                                                 PFAM: Dihydroorotate dehydrogenase; electron transfer subunit; iron-sulphur cluster binding domain; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein                                                      TIGRFAM:                                                                                                                        KEGG: ele:Elen_1254 oxidoreductase FAD/NAD(P)-binding domain protein                                                                                                 COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0487    r       443672     442605     prodigal   cytochrome-c3 hydrogenase alpha chain                                                                                  KEGG          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein TERMP_2170 [Thermococcus barophilus MP] gb|EDY40167.1| hypothetical protein TERMP_2170 [Thermococcus barophilus MP]                                                                                                                      SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: pho:PH1290 cytochrome-c3 hydrogenase alpha chain                                                                                                               nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0488    f       443844     444335     prodigal   pantetheine-phosphate adenylyltransferase                                                                              TIGR          12     nd                nd                                       nd            nd          NR top hit: pantetheine-phosphate adenylyltransferase [Thermoanaerobacter italicus Ab9] ref|YP_003677068.1| pantetheine-phosphate adenylyltransferase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gb|ADD02555.1| pantetheine-phosp-TRUNCATED-                 SPTR: Phosphopantetheine adenylyltransferase;                                                                                                                                           PFAM: cytidylyltransferase                                                                                                                                                                                                                           TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein                                   KEGG: tmt:Tmath_1343 pantetheine-phosphate adenylyltransferase                                                                                                       COGs: COG0669 Phosphopantetheine adenylyltransferase                                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0489    r       445791     444358     prodigal   Aldehyde Dehydrogenase                                                                                                 PFAM          3      nd                nd                                       nd            nd          NR top hit: aldehyde dehydrogenase [Aquifex aeolicus VF5] gb|AAC06525.1| aldehyde dehydrogenase [Aquifex aeolicus VF5]                                                                                                                                                    SPTR: Aldehyde dehydrogenase;                                                                                                                                                           PFAM: Aldehyde Dehydrogenase                                                                                                                                                                                                                         TIGRFAM:                                                                                                                        KEGG: aae:aq_186 aldehyde dehydrogenase                                                                                                                              COGs: COG1012 NAD-dependent aldehyde dehydrogenase                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0490    r       446515     445793     prodigal   metallophosphoesterase                                                                                                 PFAM          11     nd                nd                                       nd            nd          NR top hit: metallophosphoesterase [Sulfurihydrogenibium sp. YO3AOP1] gb|ACD66898.1| metallophosphoesterase [Sulfurihydrogenibium sp. YO3AOP1]                                                                                                                            SPTR: Metallophosphoesterase;                                                                                                                                                           PFAM: metallophosphoesterase                                                                                                                                                                                                                         TIGRFAM:                                                                                                                        KEGG: sul:SYO3AOP1_1287 metallophosphoesterase                                                                                                                       COGs: COG0622 phosphoesterase                                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0491    f       446542     447456     prodigal   tRNA synthetase class II (D K and N)                                                                                   PFAM          7      nd                nd                                       nd            nd          NR top hit: tRNA synthetase class II (D K and N) [Geobacter lovleyi SZ] gb|ACD95630.1| tRNA synthetase class II (D K and N) [Geobacter lovleyi SZ]                                                                                                                        SPTR: tRNA synthetase class II (D K and N);                                                                                                                                             PFAM: tRNA synthetase class II (D K and N)                                                                                                                                                                                                           TIGRFAM:                                                                                                                        KEGG: glo:Glov_1914 tRNA synthetase class II (D K and N)                                                                                                             COGs: COG2269 Truncated possibly inactive lysyl-tRNA synthetase (class II)                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0492    r       448009     447416     prodigal   3-octaprenyl-4-hydroxybenzoate carboxy-lyase                                                                           TIGR          12     nd                nd                                       nd            nd          NR top hit: aromatic acid decarboxylase [Turicibacter sp. PC909] gb|EFF63371.1| aromatic acid decarboxylase [Turicibacter sp. PC909]                                                                                                                                      SPTR: Aromatic acid decarboxylase;                                                                                                                                                      PFAM: flavoprotein                                                                                                                                                                                                                                   TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase                                                                           KEGG: pho:PH1014 aromatic acid decarboxylase                                                                                                                         COGs: COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase                                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0493    f       448074     448952     prodigal   acetylglutamate kinase                                                                                                 TIGR          10     nd                nd                                       nd            nd          NR top hit: acetylglutamate kinase [Denitrovibrio acetiphilus DSM 12809] gb|ADD67242.1| acetylglutamate kinase [Denitrovibrio acetiphilus DSM 12809]                                                                                                                      SPTR: Acetylglutamate kinase;                                                                                                                                                           PFAM: aspartate/glutamate/uridylate kinase                                                                                                                                                                                                           TIGRFAM: acetylglutamate kinase                                                                                                 KEGG: dap:Dacet_0443 acetylglutamate kinase                                                                                                                          COGs: COG0548 Acetylglutamate kinase                                                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0494    f       449051     450451     prodigal   cytochrome bd ubiquinol oxidase subunit I                                                                              PFAM          3      nd                nd                                       nd            nd          NR top hit: cytochrome bd oxidase subunit I [Deferribacter desulfuricans SSM1] dbj|BAI81077.1| cytochrome bd oxidase subunit I [Deferribacter desulfuricans SSM1]                                                                                                         SPTR: Cytochrome bd oxidase subunit I;                                                                                                                                                  PFAM: cytochrome bd ubiquinol oxidase subunit I                                                                                                                                                                                                      TIGRFAM:                                                                                                                        KEGG: ddf:DEFDS_1619 cytochrome bd oxidase subunit I                                                                                                                 COGs: COG1271 Cytochrome bd-type quinol oxidase subunit 1                                                                                                                                       
tam15698  08/20/2010  Contig31    Theam_0495    f       450467     451666     prodigal   cytochrome d ubiquinol oxidase; subunit II                                                                             TIGR          3      nd                nd                                       nd            nd          NR top hit: cytochrome d ubiquinol oxidase; subunit II [Brucella suis ATCC 23445] gb|ABY39504.1| cytochrome d ubiquinol oxidase; subunit II [Brucella suis ATCC 23445]                                                                                                    SPTR: Cytochrome d ubiquinol oxidase; subunit II;                                                                                                                                       PFAM: cytochrome bd ubiquinol oxidase subunit II                                                                                                                                                                                                     TIGRFAM: cytochrome d ubiquinol oxidase; subunit II                                                                             KEGG: bmt:BSUIS_B0508 cytochrome d ubiquinol oxidase; subunit II                                                                                                     COGs: COG1294 Cytochrome bd-type quinol oxidase subunit 2                                                                                                                                       
tam15698  08/20/2010  Contig31    Theam_0496    f       451801     452214     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: predicted protein [Physcomitrella patens subsp. patens] gb|EDQ65420.1| predicted protein [Physcomitrella patens subsp. patens]                                                                                                                                SPTR: Predicted protein;                                                                                                                                                                PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: ppp:PHYPADRAFT_84996 hypothetical protein                                                                                                                      nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0497    f       452195     452296     prodigal   hypothetical protein                                                                                                   hypothetical  13     nd                nd                                       nd            nd          nd                                                                                                                                                                                                                                                                        nd                                                                                                                                                                                      PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        nd                                                                                                                                                                   nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0498    r       453915     452293     prodigal   Fibronectin-binding A domain protein                                                                                   PFAM          6      nd                nd                                       nd            nd          NR top hit: fibronectin-binding protein [Bacillus megaterium QM B1551] gb|ADE71257.1| fibronectin-binding protein [Bacillus megaterium QM B1551]                                                                                                                          SPTR: Fibronectin-binding protein;                                                                                                                                                      PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814                                                                                                                                                                       TIGRFAM:                                                                                                                        KEGG: bmq:BMQ_4247 fibronectin-binding protein                                                                                                                       COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0499    r       455339     453915     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein aq_276 [Aquifex aeolicus VF5] gb|AAC06598.1| putative protein [Aquifex aeolicus VF5]                                                                                                                                                     SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: aae:aq_276 hypothetical protein                                                                                                                                COGs: COG3581 conserved hypothetical protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0500    r       455568     455332     prodigal   RNA chaperone Hfq                                                                                                      TIGR          11     nd                nd                                       nd            nd          NR top hit: RNA-binding protein Hfq [Zymomonas mobilis subsp. mobilis ZM4] ref|ZP_04758991.1| RNA chaperone Hfq [Zymomonas mobilis subsp. mobilis ATCC 10988] ref|YP_003226021.1| RNA chaperone Hfq [Zymomonas mobilis subsp. mobilis NCIB 11163] gb|AAV889-TRUNCATED-    SPTR: RNA chaperone Hfq;                                                                                                                                                                PFAM: Like-Sm ribonucleoprotein core                                                                                                                                                                                                                 TIGRFAM: RNA chaperone Hfq                                                                                                      KEGG: zmn:Za10_0891 RNA-binding protein Hfq                                                                                                                          COGs: COG1923 Uncharacterized host factor I protein                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0501    r       456537     455614     prodigal   tRNA delta(2)-isopentenylpyrophosphate transferase                                                                     TIGR          7      nd                nd                                       nd            nd          NR top hit: tRNA delta(2)-isopentenylpyrophosphate transferase [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN99480.1| tRNA delta(2)-isopentenylpyrophosphate transferase [Sulfurihydrogenibium azorense Az-Fu1]                                                            SPTR: tRNA dimethylallyltransferase;                                                                                                                                                    PFAM: tRNA isopentenyltransferase                                                                                                                                                                                                                    TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase                                                                     KEGG: saf:SULAZ_0970 tRNA delta(2)-isopentenylpyrophosphate transferase                                                                                              COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0502    r       458037     456583     prodigal   glutamyl-tRNA synthetase                                                                                               TIGR          7      nd                nd                                       nd            nd          NR top hit: glutamyl-tRNA synthetase [Persephonella marina EX-H1] gb|ACO03109.1| glutamyl-tRNA synthetase [Persephonella marina EX-H1]                                                                                                                                    SPTR: Glutamyl-tRNA synthetase;                                                                                                                                                         PFAM: Glutamyl/glutaminyl-tRNA synthetase; class Ic; catalytic domain                                                                                                                                                                                TIGRFAM: glutamyl-tRNA synthetase                                                                                               KEGG: pmx:PERMA_1911 glutamyl-tRNA synthetase                                                                                                                        COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase                                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0503    f       458092     458370     prodigal   type III secretion exporter                                                                                            PFAM          13     nd                nd                                       nd            nd          NR top hit: flagellar biosynthetic protein FlhB [Persephonella marina EX-H1] gb|ACO04492.1| flagellar biosynthetic protein FlhB [Persephonella marina EX-H1]                                                                                                              SPTR: Flagellar biosynthetic protein FlhB;                                                                                                                                              PFAM: type III secretion exporter                                                                                                                                                                                                                    TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_0112 flagellar biosynthetic protein FlhB                                                                                                             COGs: COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB                                                                                                       
tam15698  08/20/2010  Contig31    Theam_0504    r       458620     458348     prodigal   Anti-sigma-28 factor FlgM family protein                                                                               PFAM          0      nd                nd                                       nd            nd          NR top hit: negative regulator of flagellin synthesis (anti-sigma-d factor) [Clostridium difficile 630] emb|CAJ67050.1| negative regulator of flagellin synthesis (anti-sigma-d factor) [Clostridium difficile 630]                                                       SPTR: Negative regulator of flagellin synthesis (Anti-sigma-d factor);                                                                                                                  PFAM: Anti-sigma-28 factor FlgM family protein                                                                                                                                                                                                       TIGRFAM:                                                                                                                        KEGG: cdf:CD0229 negative regulator of flagellin synthesis (anti-sigma-D factor)                                                                                     nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0505    r       459434     458712     prodigal   Uroporphyrinogen III synthase HEM4                                                                                     PFAM          12     nd                nd                                       nd            nd          NR top hit: uroporphyrinogen-III synthase [Persephonella marina EX-H1] gb|ACO04450.1| uroporphyrinogen-III synthase [Persephonella marina EX-H1]                                                                                                                          SPTR: Uroporphyrinogen-III synthase;                                                                                                                                                    PFAM: Uroporphyrinogen III synthase HEM4                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1098 uroporphyrinogen-III synthase                                                                                                                   COGs: COG1587 Uroporphyrinogen-III synthase                                                                                                                                                     
tam15698  08/20/2010  Contig31    Theam_0506    r       460360     459425     prodigal   porphobilinogen deaminase                                                                                              TIGR          12     nd                nd                                       nd            nd          NR top hit: porphobilinogen deaminase [Persephonella marina EX-H1] gb|ACO03220.1| porphobilinogen deaminase [Persephonella marina EX-H1]                                                                                                                                  SPTR: Porphobilinogen deaminase;                                                                                                                                                        PFAM: Porphobilinogen deaminase                                                                                                                                                                                                                      TIGRFAM: porphobilinogen deaminase                                                                                              KEGG: pmx:PERMA_0444 porphobilinogen deaminase                                                                                                                       COGs: COG0181 Porphobilinogen deaminase                                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0507    r       461635     460364     prodigal   glutamyl-tRNA reductase                                                                                                TIGR          12     nd                nd                                       nd            nd          NR top hit: glutamyl-tRNA reductase [Desulfurivibrio alkaliphilus AHT2] gb|ADH87216.1| glutamyl-tRNA reductase [Desulfurivibrio alkaliphilus AHT2]                                                                                                                        SPTR: Glutamyl-tRNA reductase;                                                                                                                                                          PFAM: Shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis; glutamyl-tRNA reductase-like                                                                                                                                                     TIGRFAM: glutamyl-tRNA reductase                                                                                                KEGG: dak:DaAHT2_2552 glutamyl-tRNA reductase                                                                                                                        COGs: COG0373 Glutamyl-tRNA reductase                                                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0508    r       462456     461638     prodigal   cytochrome c assembly protein                                                                                          PFAM          11     nd                nd                                       nd            nd          NR top hit: cytochrome c-type biogenesis protein CcsB [Geobacter sp. M18] gb|EET34505.1| cytochrome c-type biogenesis protein CcsB [Geobacter sp. M18]                                                                                                                    SPTR: Cytochrome c-type biogenesis protein CcsB;                                                                                                                                        PFAM: cytochrome c assembly protein                                                                                                                                                                                                                  TIGRFAM:                                                                                                                        KEGG: gbm:Gbem_0406 cytochrome c-type biogenesis protein CcsB                                                                                                        COGs: COG4137 ABC-type uncharacterized transport system permease component                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0509    r       463214     462465     prodigal   3-dehydroquinate dehydratase; type I                                                                                   TIGR          10     nd                nd                                       nd            nd          NR top hit: 3-dehydroquinate dehydratase; type I [Sulfurihydrogenibium yellowstonense SS-5] gb|EEP60042.1| 3-dehydroquinate dehydratase; type I [Sulfurihydrogenibium yellowstonense SS-5]                                                                                SPTR: 3-dehydroquinate dehydratase;                                                                                                                                                     PFAM: dehydroquinase class I                                                                                                                                                                                                                         TIGRFAM: 3-dehydroquinate dehydratase; type I                                                                                   KEGG: sul:SYO3AOP1_1460 3-dehydroquinate dehydratase; type I                                                                                                         COGs: COG0710 3-dehydroquinate dehydratase                                                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0510    r       463560     463216     prodigal   protein of unknown function DUF190                                                                                     PFAM          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein NIS_1373 [Nitratiruptor sp. SB155-2] dbj|BAF70481.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]                                                                                                                          SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function DUF190                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: nis:NIS_1373 hypothetical protein                                                                                                                              COGs: COG1993 conserved hypothetical protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0511    r       465266     463560     prodigal   type IV-A pilus assembly ATPase PilB                                                                                   TIGR          9      nd                nd                                       nd            nd          NR top hit: type IV pilus assembly protein PilB [Deferribacter desulfuricans SSM1] dbj|BAI80578.1| type IV pilus assembly protein PilB [Deferribacter desulfuricans SSM1]                                                                                                 SPTR: Type IV pilus assembly protein PilB;                                                                                                                                              PFAM: type II secretion system protein E; General secretory system II protein E domain protein                                                                                                                                                       TIGRFAM: type IV-A pilus assembly ATPase PilB                                                                                   KEGG: ddf:DEFDS_1109 type IV pilus assembly protein PilB                                                                                                             COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0512    r       465932     465279     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein HG1285_18234 [Hydrogenivirga sp. 128-5-R1-1] gb|EDP76135.1| hypothetical protein HG1285_18234 [Hydrogenivirga sp. 128-5-R1-1]                                                                                                            SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: aae:aq_2056 hypothetical protein                                                                                                                               COGs: COG1318 transcriptional regulator protein                                                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0513    f       466064     467227     prodigal   cell wall hydrolase/autolysin                                                                                          PFAM          9      nd                nd                                       nd            nd          NR top hit: N-acetylmuramoyl-L-alanine amidase [Pseudomonas fluorescens Pf-5] gb|AAY95364.1| N-acetylmuramoyl-L-alanine amidase [Pseudomonas fluorescens Pf-5]                                                                                                            SPTR: N-acetylmuramoyl-L-alanine amidase;                                                                                                                                               PFAM: cell wall hydrolase/autolysin                                                                                                                                                                                                                  TIGRFAM:                                                                                                                        KEGG: pfl:PFL_6176 N-acetylmuramoyl-L-alanine amidase                                                                                                                COGs: COG0860 N-acetylmuramoyl-L-alanine amidase                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0514    f       467227     468519     prodigal   3-phosphoshikimate 1-carboxyvinyltransferase                                                                           TIGR          10     nd                nd                                       nd            nd          NR top hit: 3-phosphoshikimate 1-carboxyvinyltransferase [Bacillus sp. NRRL B-14911] gb|EAR65399.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Bacillus sp. NRRL B-14911]                                                                                              SPTR: 3-phosphoshikimate 1-carboxyvinyltransferase;                                                                                                                                     PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)                                                                                                                                                                                   TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase                                                                           KEGG: hor:Hore_10370 3-phosphoshikimate 1-carboxyvinyltransferase                                                                                                    COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase                                                                                                                                       
tam15698  08/20/2010  Contig31    Theam_0515    r       468737     468477     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: structural maintenance of chromosome domain-containing protein [Toxoplasma gondii GT1]                                                                                                                                                                        SPTR: Structural maintenance of chromosome 3;                                                                                                                                           PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: tgo:TGME49_106310 structural maintenance of chromosome domain-containing protein                                                                               nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0516    f       468945     469208     prodigal   protein of unknown function DUF134                                                                                     KEGG          11     nd                nd                                       nd            nd          NR top hit: protein of unknown function DUF134 [Chlorobaculum parvum NCIB 8327] gb|ACF11682.1| protein of unknown function DUF134 [Chlorobaculum parvum NCIB 8327]                                                                                                        SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: cpc:Cpar_1279 protein of unknown function DUF134                                                                                                               nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0517    r       470437     469205     prodigal   peptidase U32                                                                                                          PFAM          9      nd                nd                                       nd            nd          NR top hit: hypothetical protein CLOHIR_01161 [Clostridium hiranonis DSM 13275] gb|EEA85227.1| hypothetical protein CLOHIR_01161 [Clostridium hiranonis DSM 13275]                                                                                                        SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: peptidase U32                                                                                                                                                                                                                                  TIGRFAM:                                                                                                                        KEGG: cpr:CPR_1741 U32 family peptidase                                                                                                                              COGs: COG0826 Collagenase and related protease                                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0518    r       471328     470483     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: ribonucleoside-diphosphate reductase; beta subunit [Porphyromonas endodontalis ATCC 35406] gb|EEN83139.1| ribonucleoside-diphosphate reductase; beta subunit [Porphyromonas endodontalis ATCC 35406]                                                          SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: bpy:Bphyt_7398 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0519    f       471541     473223     prodigal   ATPase associated with various cellular activities AAA_5                                                               PFAM          9      nd                nd                                       nd            nd          NR top hit: heat shock protein HslVU; ATPase subunit HslU [Borrelia burgdorferi Bol26] gb|EEH31555.1| heat shock protein HslVU; ATPase subunit HslU [Borrelia burgdorferi Bol26]                                                                                          SPTR: Heat shock protein HslVU; ATPase subunit HslU;                                                                                                                                    PFAM: ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein                                                                                                                                                          TIGRFAM:                                                                                                                        KEGG: bbz:BbuZS7_0301 ATP-dependent protease ATP-binding subunit HslU                                                                                                COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase subunit                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0520    f       473282     474277     prodigal   Porphobilinogen synthase                                                                                               PRIAM         12     nd                nd                                       nd            nd          NR top hit: delta-aminolevulinic acid dehydratase [Persephonella marina EX-H1] gb|ACO03697.1| delta-aminolevulinic acid dehydratase [Persephonella marina EX-H1]                                                                                                          SPTR: Delta-aminolevulinic acid dehydratase;                                                                                                                                            PFAM: delta-aminolevulinic acid dehydratase                                                                                                                                                                                                          TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_0460 delta-aminolevulinic acid dehydratase                                                                                                           COGs: COG0113 Delta-aminolevulinic acid dehydratase                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0521    f       474287     474637     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein CAWG_03178 [Candida albicans WO-1]                                                                                                                                                                                                       SPTR: Putative uncharacterized protein PRI2;                                                                                                                                            PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: cal:CaO19.2885 DNA primase large subunit                                                                                                                       nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0522    f       474641     475468     prodigal   beta-lactamase domain-containing protein                                                                               KEGG          3      nd                nd                                       nd            nd          NR top hit: Beta-lactamase-like [delta proteobacterium MLMS-1] gb|EAT04623.1| Beta-lactamase-like [delta proteobacterium MLMS-1]                                                                                                                                          SPTR: Beta-lactamase-like;                                                                                                                                                              PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dak:DaAHT2_0789 beta-lactamase domain-containing protein                                                                                                       COGs: COG0426 flavoprotein                                                                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0523    f       475535     475762     prodigal   ribosomal protein S21                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: 30S ribosomal protein S21 [Persephonella marina EX-H1] sp|C0QTB8.1|RS21_PERMH RecName: Full=30S ribosomal protein S21 gb|ACO03660.1| ribosomal protein S21 [Persephonella marina EX-H1]                                                                       SPTR: 30S ribosomal protein S21;                                                                                                                                                        PFAM: ribosomal protein S21                                                                                                                                                                                                                          TIGRFAM: ribosomal protein S21                                                                                                  KEGG: pmx:PERMA_0135 30S ribosomal protein S21                                                                                                                       nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0524    f       475776     476231     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein TM0690 [Thermotoga maritima MSB8] gb|AAD35772.1|AE001741_5 conserved hypothetical protein [Thermotoga maritima MSB8]                                                                                                                     SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: tma:TM0690 hypothetical protein                                                                                                                                COGs: COG1610 conserved hypothetical protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0525    f       476416     478686     prodigal   MutS2 family protein                                                                                                   TIGR          2      nd                nd                                       nd            nd          NR top hit: DNA mismatch repair protein MutS [Aquifex aeolicus VF5] sp|O67287.1|MUTS2_AQUAE RecName: Full=MutS2 protein gb|AAC07247.1| DNA mismatch repair protein MutS [Aquifex aeolicus VF5]                                                                            SPTR: MutS2 protein;                                                                                                                                                                    PFAM: Smr protein/MutS2; DNA mismatch repair protein MutS domain protein                                                                                                                                                                             TIGRFAM: MutS2 family protein                                                                                                   KEGG: aae:aq_1242 DNA mismatch repair protein MutS                                                                                                                   COGs: COG1193 Mismatch repair ATPase (MutS family)                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0526    f       478748     479938     prodigal   acetylornithine and succinylornithine aminotransferase                                                                 TIGR          10     nd                nd                                       nd            nd          NR top hit: acetylornithine aminotransferase [Moorella thermoacetica ATCC 39073] gb|ABC20574.1| acetylornithine aminotransferase [Moorella thermoacetica ATCC 39073]                                                                                                      SPTR: Acetylornithine aminotransferase;                                                                                                                                                 PFAM: aminotransferase class-III                                                                                                                                                                                                                     TIGRFAM: acetylornithine and succinylornithine aminotransferase                                                                 KEGG: mta:Moth_2287 acetylornithine aminotransferase                                                                                                                 COGs: COG4992 Ornithine/acetylornithine aminotransferase                                                                                                                                        
tam15698  08/20/2010  Contig31    Theam_0527    f       479925     481631     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: PREDICTED: similar to transforming; acidic coiled-coil containing protein 3 [Monodelphis domestica]                                                                                                                                                           SPTR: ATPase involved in DNA repair;                                                                                                                                                    PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: mdo:100024199 similar to transforming; acidic coiled-coil containing protein 3                                                                                 nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0528    r       481876     481619     prodigal   glutaredoxin 2                                                                                                         KEGG          11     nd                nd                                       nd            nd          NR top hit: glutaredoxin 2 [Thermosipho melanesiensis BI429] gb|ABR31489.1| glutaredoxin 2 [Thermosipho melanesiensis BI429]                                                                                                                                              SPTR: Glutaredoxin 2;                                                                                                                                                                   PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: tme:Tmel_1645 glutaredoxin 2                                                                                                                                   nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0529    r       483426     481873     prodigal   amino acid permease-associated region                                                                                  PFAM          10     nd                nd                                       nd            nd          NR top hit: amino acid transporter [Nitratiruptor sp. SB155-2] dbj|BAF69902.1| amino acid transporter [Nitratiruptor sp. SB155-2]                                                                                                                                         SPTR: Amino acid transporter;                                                                                                                                                           PFAM: amino acid permease-associated region                                                                                                                                                                                                          TIGRFAM:                                                                                                                        KEGG: nis:NIS_0790 amino acid transporter                                                                                                                            COGs: COG0531 Amino acid transporter                                                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0530    r       484355     483426     prodigal   2-dehydropantoate 2-reductase                                                                                          TIGR          12     nd                nd                                       nd            nd          NR top hit: putative 2-dehydropantoate 2-reductase (Ketopantoate reductase) (KPA reductase) (KPR) [NC10 bacterium 'Dutch sediment']                                                                                                                                       SPTR: 2-dehydropantoate 2-reductase;                                                                                                                                                    PFAM: Ketopantoate reductase ApbA/PanE  domain protein                                                                                                                                                                                               TIGRFAM: 2-dehydropantoate 2-reductase                                                                                          KEGG: ddf:DEFDS_2126 hypothetical protein                                                                                                                            COGs: COG1893 Ketopantoate reductase                                                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0531    r       485017     484352     prodigal   molybdopterin-guanine dinucleotide biosynthesis protein B                                                              TIGR          12     nd                nd                                       nd            nd          NR top hit: molybdopterin-guanine dinucleotide biosynthesis protein B [Desulfotalea psychrophila LSv54] emb|CAG36495.1| related to molybdopterin-guanine dinucleotide biosynthesis protein B [Desulfotalea psychrophila LSv54]                                            SPTR: Related to molybdopterin-guanine dinucleotide biosynthesis protein B;                                                                                                             PFAM:                                                                                                                                                                                                                                                TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B                                                              KEGG: dps:DP1766 molybdopterin-guanine dinucleotide biosynthesis protein B                                                                                           COGs: COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0532    f       485131     485574     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: NMT1/THI5 like protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gb|EFK28639.1| NMT1/THI5 like protein [Lactobacillus plantarum subsp. plantarum ATCC 14917]                                                                                      SPTR: Abc1;                                                                                                                                                                             PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: aga:AgaP_AGAP012386 AGAP012386-PA                                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0533    f       485571     487802     prodigal   PKD domain containing protein                                                                                          PFAM          11     nd                nd                                       nd            nd          NR top hit: peptidase C1A; papain [Clostridium beijerinckii NCIMB 8052] gb|ABR35951.1| peptidase C1A; papain [Clostridium beijerinckii NCIMB 8052]                                                                                                                        SPTR: Peptidase C1A; papain;                                                                                                                                                            PFAM: PKD domain containing protein; peptidase C1A papain; YD repeat-containing protein                                                                                                                                                              TIGRFAM:                                                                                                                        KEGG: cbe:Cbei_3836 peptidase C1A; papain                                                                                                                            COGs: COG3291 FOG: PKD repeat                                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0534    r       489512     487860     prodigal   dihydroxy-acid dehydratase                                                                                             TIGR          10     nd                nd                                       nd            nd          NR top hit: dihydroxy-acid dehydratase [Thermodesulfovibrio yellowstonii DSM 11347] sp|B5YKD5.1|ILVD_THEYD RecName: Full=Dihydroxy-acid dehydratase; Short=DAD gb|ACI21946.1| dihydroxy-acid dehydratase [Thermodesulfovibrio yellowstonii DSM -TRUNCATED-                SPTR: Dihydroxy-acid dehydratase;                                                                                                                                                       PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase                                                                                                                                                                                              TIGRFAM: dihydroxy-acid dehydratase                                                                                             KEGG: tye:THEYE_A0862 dihydroxy-acid dehydratase                                                                                                                     COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0535    r       489735     489502     prodigal   protein of unknown function DUF465                                                                                     PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein THEYE_A0863 [Thermodesulfovibrio yellowstonii DSM 11347] gb|ACI21568.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii DSM 11347]                                                                                      SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function DUF465                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: tye:THEYE_A0863 hypothetical protein                                                                                                                           nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0536    r       490182     489745     prodigal   ribosomal-protein-alanine acetyltransferase                                                                            TIGR          11     nd                nd                                       nd            nd          NR top hit: ribosomal-protein-alanine acetyltransferase [Ruminococcus sp. 18P13]                                                                                                                                                                                          SPTR: Ribosomal-protein-alanine acetyltransferase;                                                                                                                                      PFAM: GCN5-related N-acetyltransferase                                                                                                                                                                                                               TIGRFAM: ribosomal-protein-alanine acetyltransferase                                                                            KEGG: cpe:CPE2166 ribosomal-protein-alanine acetyltransferase                                                                                                        COGs: COG0456 Acetyltransferase                                                                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0537    r       490744     490154     prodigal   peptidase M22 glycoprotease                                                                                            PFAM          9      nd                nd                                       nd            nd          NR top hit: M22 family O-sialoglycoprotein endopeptidase [Weissella paramesenteroides ATCC 33313] gb|EER75250.1| M22 family O-sialoglycoprotein endopeptidase [Weissella paramesenteroides ATCC 33313]                                                                    SPTR: M22 family O-sialoglycoprotein endopeptidase;                                                                                                                                     PFAM: peptidase M22 glycoprotease                                                                                                                                                                                                                    TIGRFAM:                                                                                                                        KEGG: rer:RER_19170 hypothetical protein                                                                                                                             COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0538    r       491513     490746     prodigal   Prepilin peptidase                                                                                                     PRIAM         9      nd                nd                                       nd            nd          NR top hit: peptidase A24A domain-containing protein [Desulfococcus oleovorans Hxd3] gb|ABW67659.1| peptidase A24A domain protein [Desulfococcus oleovorans Hxd3]                                                                                                         SPTR: Peptidase A24A domain protein;                                                                                                                                                    PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV                                                                                                                                                                                 TIGRFAM:                                                                                                                        KEGG: dol:Dole_1855 peptidase A24A domain-containing protein                                                                                                         COGs: COG1989 Type II secretory pathway prepilin signal peptidase PulO and related peptidase                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0539    r       492133     491513     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein DDB_G0289077 [Dictyostelium discoideum AX4] gb|EAL62888.1| hypothetical protein DDB_G0289077 [Dictyostelium discoideum AX4]                                                                                                              SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: ddi:DDB_G0289077 hypothetical protein                                                                                                                          nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0540    r       494384     492096     prodigal   DEAD/DEAH box helicase domain protein                                                                                  PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein aq_1328 [Aquifex aeolicus VF5] gb|AAC07309.1| hypothetical protein aq_1328 [Aquifex aeolicus VF5]                                                                                                                                        SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein                                                                                                                                                                                 TIGRFAM:                                                                                                                        KEGG: aae:aq_1328 hypothetical protein                                                                                                                               COGs: COG1204 Superfamily II helicase                                                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0541    f       494434     494589     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: putative regulatory protein; FmdB family [Dictyoglomus thermophilum H-6-12] gb|ACI18907.1| putative regulatory protein; FmdB family [Dictyoglomus thermophilum H-6-12]                                                                                        SPTR: Putative regulatory protein; FmdB family;                                                                                                                                         PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dth:DICTH_1607 putative regulatory protein; FmdB family                                                                                                        nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0542    f       494642     494806     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein HG1285_00960 [Hydrogenivirga sp. 128-5-R1-1] gb|EDP75290.1| hypothetical protein HG1285_00960 [Hydrogenivirga sp. 128-5-R1-1]                                                                                                            SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: aae:aq_064b hypothetical protein                                                                                                                               nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0543    f       494865     496151     prodigal   membrane protein involved in aromatic hydrocarbon degradation                                                          PFAM          5      nd                nd                                       nd            nd          NR top hit: long-chain fatty acid transport protein [Deferribacter desulfuricans SSM1] dbj|BAI80929.1| long-chain fatty acid transport protein [Deferribacter desulfuricans SSM1]                                                                                         SPTR: Long-chain fatty acid transport protein;                                                                                                                                          PFAM: membrane protein involved in aromatic hydrocarbon degradation                                                                                                                                                                                  TIGRFAM:                                                                                                                        KEGG: ddf:DEFDS_1469 long-chain fatty acid transport protein                                                                                                         COGs: COG2067 Long-chain fatty acid transport protein                                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0544    f       496170     498200     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein DEFDS_1470 [Deferribacter desulfuricans SSM1] dbj|BAI80930.1| hypothetical protein [Deferribacter desulfuricans SSM1]                                                                                                                    SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: ddf:DEFDS_1470 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0545    r       499132     498194     prodigal   oligopeptide/dipeptide ABC transporter; ATPase subunit                                                                 TIGR          10     nd                nd                                       nd            nd          NR top hit: oligopeptide transport ATP-binding protein OppD [Atopobium rimae ATCC 49626] gb|EEE16849.1| oligopeptide transport ATP-binding protein OppD [Atopobium rimae ATCC 49626]                                                                                      SPTR: Oligopeptide transport ATP-binding protein OppD;                                                                                                                                  PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter  domain protein                                                                                                                                                                TIGRFAM: oligopeptide/dipeptide ABC transporter; ATPase subunit                                                                 KEGG: dds:Ddes_1893 oligopeptide/dipeptide ABC transporter; ATPase subunit                                                                                           COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0546    r       499584     499129     prodigal   AIG2 family protein                                                                                                    PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein Daud_0807 [Candidatus Desulforudis audaxviator MP104C] gb|ACA59323.1| conserved hypothetical protein [Candidatus Desulforudis audaxviator MP104C]                                                                                        SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: AIG2 family protein                                                                                                                                                                                                                            TIGRFAM:                                                                                                                        KEGG: dau:Daud_0807 hypothetical protein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0547    r       499861     499706     prodigal   hypothetical protein                                                                                                   hypothetical  13     nd                nd                                       nd            nd          nd                                                                                                                                                                                                                                                                        nd                                                                                                                                                                                      PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        nd                                                                                                                                                                   nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0548    r       501974     500079     prodigal   acetate/CoA ligase                                                                                                     TIGR          5      nd                nd                                       nd            nd          NR top hit: acetyl-coenzyme A synthetase [Hydrogenivirga sp. 128-5-R1-1] gb|EDP75126.1| acetyl-coenzyme A synthetase [Hydrogenivirga sp. 128-5-R1-1]                                                                                                                      SPTR: Acetyl-coenzyme A synthetase;                                                                                                                                                     PFAM: AMP-dependent synthetase and ligase                                                                                                                                                                                                            TIGRFAM: acetate/CoA ligase                                                                                                     KEGG: mhu:Mhun_0352 acetate--CoA ligase                                                                                                                              COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0549    r       504018     502027     prodigal   excinuclease ABC; B subunit                                                                                            TIGR          2      nd                nd                                       nd            nd          NR top hit: excinuclease ABC subunit B [Caldicellulosiruptor saccharolyticus DSM 8903] sp|A4XKY5.1|UVRB_CALS8 RecName: Full=UvrABC system protein B; Short=Protein uvrB; AltName: Full=Excinuclease ABC subunit B gb|ABP67570.1| Excinuclease -TRUNCATED-                 SPTR: UvrABC system protein B;                                                                                                                                                          PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein                                                                                                                                                           TIGRFAM: excinuclease ABC; B subunit                                                                                            KEGG: csc:Csac_1985 excinuclease ABC subunit B                                                                                                                       COGs: COG0556 Helicase subunit of the DNA excision repair complex                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0550    r       505334     504168     prodigal   transposase; IS605 OrfB family                                                                                         TIGR          2      nd                nd                                       nd            nd          NR top hit: Transposase [Hydrogenivirga sp. 128-5-R1-1] gb|EDP76043.1| Transposase [Hydrogenivirga sp. 128-5-R1-1]                                                                                                                                                        SPTR: Transposase;                                                                                                                                                                      PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family                                                                                                                                                                                 TIGRFAM: transposase; IS605 OrfB family                                                                                         KEGG: mbu:Mbur_2016 transposase                                                                                                                                      COGs: COG0675 Transposase and inactivated derivatives                                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0551    f       505426     508170     prodigal   Tetratricopeptide TPR_1 repeat-containing protein                                                                      PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein Desal_1948 [Desulfovibrio salexigens DSM 2638] gb|ACS80008.1| hypothetical protein Desal_1948 [Desulfovibrio salexigens DSM 2638]                                                                                                        SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: Tetratricopeptide TPR_1 repeat-containing protein                                                                                                                                                                                              TIGRFAM:                                                                                                                        KEGG: dsa:Desal_1948 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0552    f       508170     508754     prodigal   protein of unknown function DUF507                                                                                     PFAM          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein SULAZ_0295 [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN99222.1| conserved hypothetical protein [Sulfurihydrogenibium azorense Az-Fu1]                                                                                                   SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function DUF507                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: saf:SULAZ_0295 hypothetical protein                                                                                                                            COGs: COG2952 conserved hypothetical protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0553    f       508726     509028     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: Septum formation initiator [Thermocrinis albus DSM 14484] gb|ADC89208.1| Septum formation initiator [Thermocrinis albus DSM 14484]                                                                                                                            SPTR: Septum formation initiator;                                                                                                                                                       PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: tal:Thal_0574 septum formation initiator                                                                                                                       nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0554    f       509006     509494     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein [Paramecium tetraurelia strain d4-2] emb|CAK74929.1| unnamed protein product [Paramecium tetraurelia]                                                                                                                                    SPTR: Chromosome undetermined scaffold_3; whole genome shotgun sequence;                                                                                                                PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: ptm:GSPATT00001131001 hypothetical protein                                                                                                                     nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0555    f       509478     509759     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein TGME49_078460 [Toxoplasma gondii ME49] gb|EEB03409.1| hypothetical protein TGME49_078460 [Toxoplasma gondii ME49] gb|EEE23413.1| conserved hypothetical protein [Toxoplasma gondii GT1] gb|EEE28389.1| conserved hypoth-TRUNCATED-       SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: tgo:TGME49_078460 hypothetical protein                                                                                                                         nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0556    r       510114     509767     prodigal   MacA                                                                                                                   KEGG          11     nd                nd                                       nd            nd          NR top hit: MacA [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN99008.1| MacA [Sulfurihydrogenibium azorense Az-Fu1]                                                                                                                                                        SPTR: MacA;                                                                                                                                                                             PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: saf:SULAZ_1434 MacA                                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0557    r       511264     510119     prodigal   TrkA-N domain protein                                                                                                  PFAM          9      nd                nd                                       nd            nd          NR top hit: hypothetical protein aq_303 [Aquifex aeolicus VF5] gb|AAC06619.1| hypothetical protein aq_303 [Aquifex aeolicus VF5]                                                                                                                                          SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: TrkA-N domain protein; Ion transport 2 domain protein ; TrkA-C domain protein                                                                                                                                                                  TIGRFAM:                                                                                                                        KEGG: aae:aq_303 hypothetical protein                                                                                                                                COGs: COG0569 K+ transport systems NAD-binding component                                                                                                                                        
tam15698  08/20/2010  Contig31    Theam_0558    r       512385     511276     prodigal   aminotransferase class I and II                                                                                        PFAM          10     nd                nd                                       nd            nd          NR top hit: hypothetical protein Tgr7_2043 [Thioalkalivibrio sp. HL-EbGR7] gb|ACL73123.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]                                                                                                                  SPTR: Aminotransferase; class I/class II;                                                                                                                                               PFAM: aminotransferase class I and II                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: tgr:Tgr7_2043 hypothetical protein                                                                                                                             COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase                                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0559    r       513664     512339     prodigal   MiaB-like tRNA modifying enzyme                                                                                        TIGR          7      nd                nd                                       nd            nd          NR top hit: hypothetical protein HG1285_08916 [Hydrogenivirga sp. 128-5-R1-1] gb|EDP73485.1| hypothetical protein HG1285_08916 [Hydrogenivirga sp. 128-5-R1-1]                                                                                                            SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein                                                                                                                                                                               TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme; MiaB family                                                  KEGG: pmx:PERMA_1953 hypothetical protein                                                                                                                            COGs: COG0621 2-methylthioadenine synthetase                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0560    r       513850     513746     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: PREDICTED: dnaJ homolog subfamily C member 5B-like [Callithrix jacchus]                                                                                                                                                                                       nd                                                                                                                                                                                      PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: ecb:100063938 hypothetical protein LOC100063938                                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0561    r       514777     513905     prodigal   Arsenite-transporting ATPase                                                                                           PRIAM         9      nd                nd                                       nd            nd          NR top hit: arsenite-activated ATPase ArsA [Aminobacterium colombiense DSM 12261] gb|ADE57355.1| arsenite-activated ATPase ArsA [Aminobacterium colombiense DSM 12261]                                                                                                    SPTR: Arsenite-activated ATPase ArsA;                                                                                                                                                   PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: hvo:HVO_2977 arsenical pump-driving ATPase                                                                                                                     COGs: COG0003 ATPase involved in chromosome partitioning                                                                                                                                        
tam15698  08/20/2010  Contig31    Theam_0562    r       515021     514758     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein Dpep_1800 [Dethiosulfovibrio peptidovorans DSM 11002] gb|EFC91824.1| hypothetical protein Dpep_1800 [Dethiosulfovibrio peptidovorans DSM 11002]                                                                                          SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: hla:Hlac_2713 hypothetical protein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0563    r       515868     514996     prodigal   lipid A biosynthesis acyltransferase                                                                                   PFAM          9      nd                nd                                       nd            nd          NR top hit: lipid A biosynthesis acyltransferase [Geobacter bemidjiensis Bem] gb|ACH37869.1| lipid A biosynthesis acyltransferase [Geobacter bemidjiensis Bem]                                                                                                            SPTR: Lipid A biosynthesis acyltransferase;                                                                                                                                             PFAM: lipid A biosynthesis acyltransferase                                                                                                                                                                                                           TIGRFAM:                                                                                                                        KEGG: gbm:Gbem_0846 lipid A biosynthesis acyltransferase                                                                                                             COGs: COG1560 Lauroyl/myristoyl acyltransferase                                                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0564    r       516895     515816     prodigal   tetraacyldisaccharide 4'-kinase                                                                                        TIGR          9      nd                nd                                       nd            nd          NR top hit: tetraacyldisaccharide 4'-kinase [Thermanaerovibrio acidaminovorans DSM 6589] gb|ACZ19515.1| tetraacyldisaccharide 4'-kinase [Thermanaerovibrio acidaminovorans DSM 6589]                                                                                      SPTR: Tetraacyldisaccharide 4'-kinase;                                                                                                                                                  PFAM: Tetraacyldisaccharide-1-P 4'-kinase                                                                                                                                                                                                            TIGRFAM: tetraacyldisaccharide 4'-kinase                                                                                        KEGG: tai:Taci_1284 tetraacyldisaccharide 4'-kinase                                                                                                                  COGs: COG1663 Tetraacyldisaccharide-1-P 4'-kinase                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0565    r       518049     516883     prodigal   Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein                                             PFAM          9      nd                nd                                       nd            nd          NR top hit: 3-deoxy-D-manno-octulosonic-acid transferase [Klebsiella pneumoniae 342] ref|YP_003437072.1| Three-deoxy-D-manno-octulosonic-acid transferase domain protein [Klebsiella variicola At-22] ref|ZP_06551174.1| 3-deoxy-D-manno-octul-TRUNCATED-                 SPTR: Three-deoxy-D-manno-octulosonic-acid transferase domain protein;                                                                                                                  PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein                                                                                                                                                                     TIGRFAM:                                                                                                                        KEGG: kva:Kvar_0128 three-deoxy-D-manno-octulosonic-acid transferase domain protein                                                                                  COGs: COG1519 3-deoxy-D-manno-octulosonic-acid transferase                                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0566    r       518708     518049     prodigal   Radical SAM domain protein                                                                                             PFAM          9      nd                nd                                       nd            nd          NR top hit: radical SAM domain-containing protein [Ignicoccus hospitalis KIN4/I] gb|ABU81413.1| Radical SAM domain protein [Ignicoccus hospitalis KIN4/I]                                                                                                                 SPTR: Radical SAM domain protein;                                                                                                                                                       PFAM: Radical SAM domain protein                                                                                                                                                                                                                     TIGRFAM:                                                                                                                        KEGG: iho:Igni_0229 radical SAM domain-containing protein                                                                                                            COGs: COG0602 Organic radical activating protein                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0567    r       518863     518705     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: conserved hypothetical protein [Nitrosomonas sp. AL212] gb|EET31852.1| conserved hypothetical protein [Nitrosomonas sp. AL212]                                                                                                                                SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: mav:MAV_3874 hypothetical protein                                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0568    r       519384     518872     prodigal   ATP:corrinoid adenosyltransferase BtuR/CobO/CobP                                                                       PFAM          12     nd                nd                                       nd            nd          NR top hit: cob(I)alamin adenosyltransferase [Syntrophothermus lipocalidus DSM 12680] gb|ADI01537.1| cob(I)alamin adenosyltransferase [Syntrophothermus lipocalidus DSM 12680]                                                                                            SPTR: Cob(I)alamin adenosyltransferase;                                                                                                                                                 PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP                                                                                                                                                                                               TIGRFAM:                                                                                                                        KEGG: slp:Slip_0757 cob(I)alamin adenosyltransferase                                                                                                                 COGs: COG2109 ATP:corrinoid adenosyltransferase                                                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0569    r       520466     519375     prodigal   1-deoxy-D-xylulose 5-phosphate reductoisomerase                                                                        TIGR          5      nd                nd                                       nd            nd          NR top hit: 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Pelotomaculum thermopropionicum SI] sp|A5D2U3.1|DXR_PELTS RecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; AltName: Full=1-deoxyxy-TRUNCATED-                      SPTR: 1-deoxy-D-xylulose 5-phosphate reductoisomerase;                                                                                                                                  PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein                                                                                                                                                                      TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase                                                                        KEGG: pth:PTH_1260 1-deoxy-D-xylulose 5-phosphate reductoisomerase                                                                                                   COGs: COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0570    r       521685     520453     prodigal   histidyl-tRNA synthetase                                                                                               TIGR          7      nd                nd                                       nd            nd          NR top hit: histidyl-tRNA synthetase [Aquifex aeolicus VF5] sp|O66522.1|SYH_AQUAE RecName: Full=Histidyl-tRNA synthetase; AltName: Full=Histidine--tRNA ligase; Short=HisRS gb|AAC06477.1| histidyl-tRNA synthetase [Aquifex aeolicus VF5]                                SPTR: Histidyl-tRNA synthetase;                                                                                                                                                         PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein                                                                                                                                                                       TIGRFAM: histidyl-tRNA synthetase                                                                                               KEGG: aae:aq_122 histidyl-tRNA synthetase                                                                                                                            COGs: COG0124 Histidyl-tRNA synthetase                                                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0571    r       522322     521657     prodigal   phosphoribosyltransferase                                                                                              PFAM          16     nd                nd                                       nd            nd          NR top hit: uracil phosphoribosyltransferase [Lactobacillus coleohominis 101-4-CHN] gb|EEU30053.1| uracil phosphoribosyltransferase [Lactobacillus coleohominis 101-4-CHN]                                                                                                SPTR: Uracil phosphoribosyltransferase;                                                                                                                                                 PFAM: phosphoribosyltransferase                                                                                                                                                                                                                      TIGRFAM:                                                                                                                        KEGG: amd:AMED_0885 uracil phosphoribosyltransferase                                                                                                                 COGs: COG0035 Uracil phosphoribosyltransferase                                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0572    r       522996     522319     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: Tetratricopeptide TPR_2 repeat protein [Thermocrinis albus DSM 14484] gb|ADC89510.1| Tetratricopeptide TPR_2 repeat protein [Thermocrinis albus DSM 14484]                                                                                                    SPTR: Tetratricopeptide TPR_2 repeat protein;                                                                                                                                           PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: tal:Thal_0878 tetratricopeptide TPR_2 repeat protein                                                                                                           nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0573    f       523060     525366     prodigal   diguanylate cyclase                                                                                                    TIGR          15     nd                nd                                       nd            nd          NR top hit: diguanylate cyclase/phosphodiesterase [Denitrovibrio acetiphilus DSM 12809] gb|ADD69090.1| diguanylate cyclase/phosphodiesterase [Denitrovibrio acetiphilus DSM 12809]                                                                                        SPTR: Diguanylate cyclase/phosphodiesterase;                                                                                                                                            PFAM: EAL domain protein; GGDEF domain containing protein; Cache type 2 domain protein                                                                                                                                                               TIGRFAM: diguanylate cyclase                                                                                                    KEGG: dap:Dacet_2328 diguanylate cyclase/phosphodiesterase                                                                                                           COGs: COG2200 FOG: EAL domain                                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0574    f       525363     526196     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein DaAHT2_1092 [Desulfurivibrio alkaliphilus AHT2] gb|ADH85790.1| hypothetical protein DaAHT2_1092 [Desulfurivibrio alkaliphilus AHT2]                                                                                                      SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dak:DaAHT2_1092 hypothetical protein                                                                                                                           nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0575    f       526189     529101     prodigal   glycosyl transferase family 2                                                                                          PFAM          11     nd                nd                                       nd            nd          NR top hit: glycosyl transferase family 2 [Sulfurihydrogenibium sp. YO3AOP1] gb|ACD67163.1| glycosyl transferase family 2 [Sulfurihydrogenibium sp. YO3AOP1]                                                                                                              SPTR: Glycosyl transferase family 2;                                                                                                                                                    PFAM: glycosyl transferase family 2                                                                                                                                                                                                                  TIGRFAM:                                                                                                                        KEGG: sul:SYO3AOP1_1565 glycosyl transferase family 2                                                                                                                COGs: COG1216 glycosyltransferase                                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0576    f       529088     529900     prodigal   Methyltransferase type 12                                                                                              PFAM          11     nd                nd                                       nd            nd          NR top hit: Methyltransferase type 12 [Hydrogenobaculum sp. Y04AAS1] gb|ACG58256.1| Methyltransferase type 12 [Hydrogenobaculum sp. Y04AAS1]                                                                                                                              SPTR: Methyltransferase type 12;                                                                                                                                                        PFAM: Methyltransferase type 12                                                                                                                                                                                                                      TIGRFAM:                                                                                                                        KEGG: hya:HY04AAS1_1575 methyltransferase type 12                                                                                                                    nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0577    f       529903     530790     prodigal   glucose-1-phosphate thymidylyltransferase                                                                              TIGR          9      nd                nd                                       nd            nd          NR top hit: glucose-1-phosphate thymidylyltransferase [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN98292.1| glucose-1-phosphate thymidylyltransferase [Sulfurihydrogenibium azorense Az-Fu1]                                                                              SPTR: Glucose-1-phosphate thymidylyltransferase;                                                                                                                                        PFAM: Nucleotidyl transferase                                                                                                                                                                                                                        TIGRFAM: glucose-1-phosphate thymidylyltransferase                                                                              KEGG: saf:SULAZ_0360 glucose-1-phosphate thymidylyltransferase                                                                                                       COGs: COG1209 dTDP-glucose pyrophosphorylase                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0578    f       530780     531343     prodigal   dTDP-4-dehydrorhamnose 3;5-epimerase                                                                                   TIGR          9      nd                nd                                       nd            nd          NR top hit: dTDP-4-dehydrorhamnose 3;5-epimerase [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN99669.1| dTDP-4-dehydrorhamnose 3;5-epimerase [Sulfurihydrogenibium azorense Az-Fu1]                                                                                        SPTR: dTDP-4-dehydrorhamnose 3;5-epimerase;                                                                                                                                             PFAM: dTDP-4-dehydrorhamnose 35-epimerase related                                                                                                                                                                                                    TIGRFAM: dTDP-4-dehydrorhamnose 3;5-epimerase                                                                                   KEGG: saf:SULAZ_0363 dTDP-4-dehydrorhamnose 3;5-epimerase                                                                                                            COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0579    f       531340     532335     prodigal   dTDP-glucose 4;6-dehydratase                                                                                           TIGR          9      nd                nd                                       nd            nd          NR top hit: dTDP-glucose 4;6-dehydratase [Hydrogenobaculum sp. SN] gb|EFD31434.1| dTDP-glucose 4;6-dehydratase [Hydrogenobaculum sp. SN]                                                                                                                                  SPTR: dTDP-glucose 4;6-dehydratase;                                                                                                                                                     PFAM: NAD-dependent epimerase/dehydratase                                                                                                                                                                                                            TIGRFAM: dTDP-glucose 4;6-dehydratase                                                                                           KEGG: hya:HY04AAS1_1572 dTDP-glucose 4;6-dehydratase                                                                                                                 COGs: COG1088 dTDP-D-glucose 4 6-dehydratase                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0580    f       532332     533177     prodigal   dTDP-4-dehydrorhamnose reductase                                                                                       TIGR          9      nd                nd                                       nd            nd          NR top hit: dTDP-4-dehydrorhamnose reductase [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN98468.1| dTDP-4-dehydrorhamnose reductase [Sulfurihydrogenibium azorense Az-Fu1]                                                                                                SPTR: dTDP-4-dehydrorhamnose reductase;                                                                                                                                                 PFAM: dTDP-4-dehydrorhamnose reductase                                                                                                                                                                                                               TIGRFAM: dTDP-4-dehydrorhamnose reductase                                                                                       KEGG: saf:SULAZ_0365 dTDP-4-dehydrorhamnose reductase                                                                                                                COGs: COG1091 dTDP-4-dehydrorhamnose reductase                                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0581    r       534072     533167     prodigal   histone deacetylase superfamily                                                                                        PFAM          2      nd                nd                                       nd            nd          NR top hit: acetoin utilization protein [Hydrogenivirga sp. 128-5-R1-1] gb|EDP74543.1| acetoin utilization protein [Hydrogenivirga sp. 128-5-R1-1]                                                                                                                        SPTR: Acetoin utilization protein;                                                                                                                                                      PFAM: histone deacetylase superfamily                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: aae:aq_2110 acetoin utilization protein                                                                                                                        COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0582    r       536230     534080     prodigal   ribonuclease R                                                                                                         TIGR          6      nd                nd                                       nd            nd          NR top hit: exoribonuclease [Thermoanaerobacter tengcongensis MB4] gb|AAM24238.1| Exoribonucleases [Thermoanaerobacter tengcongensis MB4]                                                                                                                                 SPTR: Exoribonucleases;                                                                                                                                                                 PFAM: ribonuclease II; Ribonuclease B OB region  domain; Peptidase S24/S26A/S26B; conserved region; RNA binding S1 domain protein                                                                                                                    TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease                                                         KEGG: tte:TTE0983 exoribonuclease                                                                                                                                    COGs: COG0557 Exoribonuclease R                                                                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0583    r       536594     536220     prodigal   TOPRIM domain-containing protein                                                                                       PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein HG1285_15641 [Hydrogenivirga sp. 128-5-R1-1] gb|EDP75411.1| hypothetical protein HG1285_15641 [Hydrogenivirga sp. 128-5-R1-1]                                                                                                            SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: TOPRIM domain-containing protein                                                                                                                                                                                                               TIGRFAM:                                                                                                                        KEGG: sul:SYO3AOP1_1031 toprim domain protein                                                                                                                        nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0584    r       537520     536603     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein Mefer_0414 [Methanocaldococcus fervens AG86] gb|ACV24240.1| conserved hypothetical protein [Methanocaldococcus fervens AG86]                                                                                                             SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: mfe:Mefer_0414 hypothetical protein                                                                                                                            COGs: COG3366 conserved hypothetical protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0585    r       538071     537517     prodigal   C_GCAxxG_C_C family protein                                                                                            PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein Ferp_1336 [Ferroglobus placidus DSM 10642] gb|ADC65488.1| hypothetical protein Ferp_1336 [Ferroglobus placidus DSM 10642]                                                                                                                SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: C_GCAxxG_C_C family protein                                                                                                                                                                                                                    TIGRFAM:                                                                                                                        KEGG: fpl:Ferp_1336 hypothetical protein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0586    r       539464     538175     prodigal   enolase                                                                                                                TIGR          4      nd                nd                                       nd            nd          NR top hit: enolase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gb|ADH61267.1| enolase [Thermoanaerobacter mathranii subsp. mathranii str. A3]                                                                                                                SPTR: Enolase;                                                                                                                                                                          PFAM: Enolase-like                                                                                                                                                                                                                                   TIGRFAM: enolase                                                                                                                KEGG: tmt:Tmath_1558 enolase                                                                                                                                         COGs: COG0148 Enolase                                                                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0587    r       539928     539452     prodigal   Uncharacterised protein family UPF0079; ATPase                                                                         PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein Cbei_0469 [Clostridium beijerinckii NCIMB 8052] gb|ABR32657.1| protein of unknown function UPF0079 [Clostridium beijerinckii NCIMB 8052]                                                                                                 SPTR: ATPase; YjeE family;                                                                                                                                                              PFAM: Uncharacterised protein family UPF0079; ATPase                                                                                                                                                                                                 TIGRFAM:                                                                                                                        KEGG: cbe:Cbei_0469 hypothetical protein                                                                                                                             COGs: COG0802 ATPase or kinase                                                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0588    r       540298     539909     prodigal   Biopolymer transport protein ExbD/TolR                                                                                 PFAM          9      nd                nd                                       nd            nd          NR top hit: tolR protein [Syntrophus aciditrophicus SB] gb|ABC78647.1| tolR protein [Syntrophus aciditrophicus SB]                                                                                                                                                        SPTR: TolR protein;                                                                                                                                                                     PFAM: Biopolymer transport protein ExbD/TolR                                                                                                                                                                                                         TIGRFAM:                                                                                                                        KEGG: sat:SYN_01052 TolR protein                                                                                                                                     COGs: COG0848 Biopolymer transport protein                                                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0589    r       541458     540295     prodigal   succinyldiaminopimelate transaminase                                                                                   TIGR          10     nd                nd                                       nd            nd          NR top hit: succinyldiaminopimelate transaminase [Persephonella marina EX-H1] gb|ACO03143.1| succinyldiaminopimelate transaminase [Persephonella marina EX-H1]                                                                                                            SPTR: Succinyldiaminopimelate transaminase;                                                                                                                                             PFAM: aminotransferase class I and II                                                                                                                                                                                                                TIGRFAM: succinyldiaminopimelate transaminase                                                                                   KEGG: pmx:PERMA_0766 succinyldiaminopimelate transaminase                                                                                                            COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase                                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0590    r       542252     541470     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein SULAZ_0799 [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN99351.1| conserved hypothetical protein [Sulfurihydrogenibium azorense Az-Fu1]                                                                                                   SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: saf:SULAZ_0799 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0591    r       542728     542252     prodigal   alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen                                                PFAM          9      nd                nd                                       nd            nd          NR top hit: peroxiredoxin family protein [Nitratiruptor sp. SB155-2] dbj|BAF70645.1| peroxiredoxin family protein [Nitratiruptor sp. SB155-2]                                                                                                                             SPTR: Peroxiredoxin family protein;                                                                                                                                                     PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen                                                                                                                                                                        TIGRFAM:                                                                                                                        KEGG: nis:NIS_1538 peroxiredoxin family protein                                                                                                                      COGs: COG1225 Peroxiredoxin                                                                                                                                                                     
tam15698  08/20/2010  Contig31    Theam_0592    f       542852     543139     prodigal   ribosomal protein S20                                                                                                  TIGR          7      nd                nd                                       nd            nd          NR top hit: ribosomal protein S20 [Persephonella marina EX-H1] sp|C0QU24.1|RS20_PERMH RecName: Full=30S ribosomal protein S20 gb|ACO03365.1| ribosomal protein S20 [Persephonella marina EX-H1]                                                                           SPTR: 30S ribosomal protein S20;                                                                                                                                                        PFAM: ribosomal protein S20                                                                                                                                                                                                                          TIGRFAM: ribosomal protein S20                                                                                                  KEGG: pmx:PERMA_0399 ribosomal protein S20                                                                                                                           nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0593    f       543292     543936     prodigal   thiamine-phosphate pyrophosphorylase                                                                                   TIGR          12     nd                nd                                       nd            nd          NR top hit: thiamine-phosphate pyrophosphorylase [Persephonella marina EX-H1] sp|C0QR82.1|THIE_PERMH RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP pyrophosphorylase; Short=TMP-PPase; AltName: Full=Thiamine-phosphate syntha-TRUNCATED-                 SPTR: Thiamine-phosphate pyrophosphorylase;                                                                                                                                             PFAM: thiamine monophosphate synthase                                                                                                                                                                                                                TIGRFAM: thiamine-phosphate pyrophosphorylase                                                                                   KEGG: pmx:PERMA_1410 thiamine-phosphate pyrophosphorylase                                                                                                            COGs: COG0352 Thiamine monophosphate synthase                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0594    f       543893     545167     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: predicted protein [Fusobacterium mortiferum ATCC 9817] gb|EEO35465.1| predicted protein [Fusobacterium mortiferum ATCC 9817]                                                                                                                                  SPTR: Predicted protein;                                                                                                                                                                PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: vpr:Vpar_0020 O-antigen polymerase                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0595    r       546227     545121     prodigal   glycosyl transferase group 1                                                                                           PFAM          9      nd                nd                                       nd            nd          NR top hit: glycosyl transferase [Deferribacter desulfuricans SSM1] dbj|BAI79833.1| glycosyl transferase [Deferribacter desulfuricans SSM1]                                                                                                                               SPTR: Glycosyl transferase;                                                                                                                                                             PFAM: glycosyl transferase group 1                                                                                                                                                                                                                   TIGRFAM:                                                                                                                        KEGG: ddf:DEFDS_0332 glycosyl transferase                                                                                                                            COGs: COG0438 Glycosyltransferase                                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0596    f       546283     547398     prodigal   glycosyl transferase group 1                                                                                           PFAM          9      nd                nd                                       nd            nd          NR top hit: glycosyl transferase group 1 [Desulfovibrio vulgaris RCH1] gb|EER78006.1| glycosyl transferase group 1 [Desulfovibrio vulgaris RCH1]                                                                                                                          SPTR: Glycosyl transferase; group 1 family protein;                                                                                                                                     PFAM: glycosyl transferase group 1                                                                                                                                                                                                                   TIGRFAM:                                                                                                                        KEGG: dvu:DVU0561 glycosyl transferase; group 1 family protein                                                                                                       COGs: COG0438 Glycosyltransferase                                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0597    f       547398     548207     prodigal   polysaccharide deacetylase                                                                                             PFAM          11     nd                nd                                       nd            nd          NR top hit: putative cytoplasmic protein [Fusobacterium sp. D12]                                                                                                                                                                                                          SPTR: Xylanase/chitin deacetylase;                                                                                                                                                      PFAM: polysaccharide deacetylase                                                                                                                                                                                                                     TIGRFAM:                                                                                                                        KEGG: tye:THEYE_A1550 xylanase/chitin deacetylase                                                                                                                    nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0598    f       548218     549951     prodigal   ABC transporter related                                                                                                PFAM          9      nd                nd                                       nd            nd          NR top hit: phospholipid-lipopolysaccharide ABC transporter [Syntrophus aciditrophicus SB] sp|Q2LVL0.1|MSBA_SYNAS RecName: Full=Lipid A export ATP-binding/permease protein msbA gb|ABC78123.1| phospholipid-lipopolysaccharide ABC transporter [Syntr-TRUNCATED-         SPTR: Lipid A export ATP-binding/permease protein msbA;                                                                                                                                 PFAM: ABC transporter related; ABC transporter transmembrane region                                                                                                                                                                                  TIGRFAM:                                                                                                                        KEGG: sat:SYN_01564 phospholipid-lipopolysaccharide ABC transporter                                                                                                  COGs: COG1132 ABC-type multidrug transport system ATPase and permease components                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0599    r       550830     549937     prodigal   glycosyl transferase family 9                                                                                          PFAM          9      nd                nd                                       nd            nd          NR top hit: glycosyl transferase family 9 [Desulfovibrio aespoeensis Aspo-2] gb|EFA66312.1| glycosyl transferase family 9 [Desulfovibrio aespoeensis Aspo-2]                                                                                                              SPTR: Glycosyl transferase family 9;                                                                                                                                                    PFAM: glycosyl transferase family 9                                                                                                                                                                                                                  TIGRFAM:                                                                                                                        KEGG: dap:Dacet_1894 glycosyl transferase family 9                                                                                                                   COGs: COG0859 ADP-heptose:LPS heptosyltransferase                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0600    f       550883     551962     prodigal   glycosyl transferase group 1                                                                                           PFAM          9      nd                nd                                       nd            nd          NR top hit: glucosyl transferase I [Aquifex aeolicus VF5] gb|AAC07836.1| glucosyl transferase I [Aquifex aeolicus VF5]                                                                                                                                                    SPTR: Glucosyl transferase I;                                                                                                                                                           PFAM: glycosyl transferase group 1                                                                                                                                                                                                                   TIGRFAM:                                                                                                                        KEGG: aae:aq_2115 glucosyl transferase I                                                                                                                             COGs: COG0438 Glycosyltransferase                                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0601    f       551955     553268     prodigal   nucleotide sugar dehydrogenase                                                                                         TIGR          9      nd                nd                                       nd            nd          NR top hit: nucleotide sugar dehydrogenase [Sulfurihydrogenibium sp. YO3AOP1] gb|ACD67354.1| nucleotide sugar dehydrogenase [Sulfurihydrogenibium sp. YO3AOP1]                                                                                                            SPTR: Nucleotide sugar dehydrogenase;                                                                                                                                                   PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase                                                                                                               TIGRFAM: nucleotide sugar dehydrogenase                                                                                         KEGG: sul:SYO3AOP1_1757 nucleotide sugar dehydrogenase                                                                                                               COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0602    f       553334     554275     prodigal   malate dehydrogenase; NAD-dependent                                                                                    TIGR          3      nd                nd                                       nd            nd          NR top hit: malate dehydrogenase [Mariprofundus ferrooxydans PV-1] gb|EAU54118.1| malate dehydrogenase [Mariprofundus ferrooxydans PV-1]                                                                                                                                  SPTR: Malate dehydrogenase;                                                                                                                                                             PFAM: Lactate/malate dehydrogenase                                                                                                                                                                                                                   TIGRFAM: malate dehydrogenase; NAD-dependent                                                                                    KEGG: aba:Acid345_1951 malate dehydrogenase (NAD)                                                                                                                    COGs: COG0039 Malate/lactate dehydrogenase                                                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0603    f       554284     555129     prodigal   hydro-lyase; Fe-S type; tartrate/fumarate subfamily; alpha subunit                                                     TIGR          3      nd                nd                                       nd            nd          NR top hit: fumarate hydratase [Alkaliphilus metalliredigens QYMF] gb|ABR49541.1| hydro-lyase; Fe-S type; tartrate/fumarate subfamily; alpha subunit [Alkaliphilus metalliredigens QYMF]                                                                                  SPTR: Hydro-lyase; Fe-S type; tartrate/fumarate subfamily; alpha subunit;                                                                                                               PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region                                                                                                                                                                                           TIGRFAM: hydro-lyase; Fe-S type; tartrate/fumarate subfamily; alpha subunit                                                     KEGG: amt:Amet_3413 fumarate hydratase                                                                                                                               COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-terminal domain                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0604    r       555858     555157     prodigal   Methyltransferase type 11                                                                                              PFAM          12     nd                nd                                       nd            nd          NR top hit: Methyltransferase domain family protein [Sulfurihydrogenibium yellowstonense SS-5] gb|EEP60633.1| Methyltransferase domain family protein [Sulfurihydrogenibium yellowstonense SS-5]                                                                          SPTR: Methyltransferase type 11;                                                                                                                                                        PFAM: Methyltransferase type 11                                                                                                                                                                                                                      TIGRFAM:                                                                                                                        KEGG: sul:SYO3AOP1_1705 methyltransferase type 11                                                                                                                    COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0605    f       555904     556974     prodigal   1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase                                                                TIGR          5      nd                nd                                       nd            nd          NR top hit: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Carboxydibrachium pacificum DSM 12653] gb|EEB75346.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Carboxydibrachium pacificum DSM 12653]                                                      SPTR: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;                                                                                                                             PFAM: IspG family protein                                                                                                                                                                                                                            TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase                                                                KEGG: tte:TTE1400 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase                                                                                               COGs: COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0606    f       556958     557293     prodigal   dihydroneopterin aldolase                                                                                              PFAM          12     nd                nd                                       nd            nd          NR top hit: dihydroneopterin aldolase [Pelotomaculum thermopropionicum SI] dbj|BAF58385.1| dihydroneopterin aldolase [Pelotomaculum thermopropionicum SI]                                                                                                                 SPTR: Dihydroneopterin aldolase;                                                                                                                                                        PFAM: dihydroneopterin aldolase                                                                                                                                                                                                                      TIGRFAM:                                                                                                                        KEGG: pth:PTH_0204 dihydroneopterin aldolase                                                                                                                         nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0607    f       557278     558354     prodigal   diguanylate cyclase                                                                                                    TIGR          15     nd                nd                                       nd            nd          NR top hit: signal transduction response regulator [Persephonella marina EX-H1] gb|ACO04588.1| signal transduction response regulator [Persephonella marina EX-H1]                                                                                                        SPTR: Signal transduction response regulator;                                                                                                                                           PFAM: GGDEF domain containing protein                                                                                                                                                                                                                TIGRFAM: diguanylate cyclase                                                                                                    KEGG: pmx:PERMA_0932 signal transduction response regulator                                                                                                          COGs: COG2199 FOG: GGDEF domain                                                                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0608    f       558351     558959     prodigal   protein of unknown function DUF208                                                                                     PFAM          13     nd                nd                                       nd            nd          NR top hit: protein of unknown function DUF208 [Ammonifex degensii KC4] gb|ACX52723.1| protein of unknown function DUF208 [Ammonifex degensii KC4]                                                                                                                        SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function DUF208                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: adg:Adeg_1629 protein of unknown function DUF208                                                                                                               COGs: COG1636 conserved hypothetical protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0609    f       559004     561529     prodigal   homocysteine S-methyltransferase                                                                                       PFAM          10     nd                nd                                       nd            nd          NR top hit: homocysteine S-methyltransferase [Syntrophothermus lipocalidus DSM 12680] gb|ADI01514.1| homocysteine S-methyltransferase [Syntrophothermus lipocalidus DSM 12680]                                                                                            SPTR: Homocysteine S-methyltransferase;                                                                                                                                                 PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein                                                                               TIGRFAM:                                                                                                                        KEGG: slp:Slip_0734 homocysteine S-methyltransferase                                                                                                                 COGs: COG1410 Methionine synthase I cobalamin-binding domain                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0610    f       561529     562086     prodigal   adenine phosphoribosyltransferase                                                                                      TIGR          16     nd                nd                                       nd            nd          NR top hit: adenine phosphoribosyltransferase [Geobacter metallireducens GS-15] sp|Q39VR8.1|APT_GEOMG RecName: Full=Adenine phosphoribosyltransferase; Short=APRT gb|ABB31656.1| adenine phosphoribosyltransferase [Geobacter metallireducens GS-15]                      SPTR: Adenine phosphoribosyltransferase;                                                                                                                                                PFAM: phosphoribosyltransferase                                                                                                                                                                                                                      TIGRFAM: adenine phosphoribosyltransferase                                                                                      KEGG: gme:Gmet_1422 adenine phosphoribosyltransferase                                                                                                                COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein                                                                                                        
tam15698  08/20/2010  Contig31    Theam_0611    f       562106     563347     prodigal   3-oxoacyl-[acyl-carrier-protein] synthase 2                                                                            TIGR          5      nd                nd                                       nd            nd          NR top hit: 3-oxoacyl-(acyl-carrier-protein) synthase 2 [Hydrogenobaculum sp. Y04AAS1] gb|ACG57198.1| 3-oxoacyl-(acyl-carrier-protein) synthase 2 [Hydrogenobaculum sp. Y04AAS1]                                                                                          SPTR: 3-oxoacyl-(Acyl-carrier-protein) synthase 2;                                                                                                                                      PFAM: Beta-ketoacyl synthase                                                                                                                                                                                                                         TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2                                                                            KEGG: hya:HY04AAS1_0511 3-oxoacyl-(acyl-carrier-protein) synthase 2                                                                                                  COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0612    f       563344     564054     prodigal   ribonuclease III                                                                                                       TIGR          6      nd                nd                                       nd            nd          NR top hit: ribonuclease III [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN99415.1| ribonuclease III [Sulfurihydrogenibium azorense Az-Fu1]                                                                                                                                SPTR: Ribonuclease III;                                                                                                                                                                 PFAM: ribonuclease III; double-stranded RNA binding domain protein                                                                                                                                                                                   TIGRFAM: ribonuclease III                                                                                                       KEGG: saf:SULAZ_0055 ribonuclease III                                                                                                                                COGs: COG0571 dsRNA-specific ribonuclease                                                                                                                                                       
tam15698  08/20/2010  Contig31    Theam_0613    f       564038     564604     prodigal   maf protein                                                                                                            TIGR          9      nd                nd                                       nd            nd          NR top hit: maf protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gb|EET54975.1| maf protein [Thermoanaerobacterium thermosaccharolyticum DSM 571]                                                                                                            SPTR: Maf-like protein TtheDRAFT_0682;                                                                                                                                                  PFAM: Maf family protein                                                                                                                                                                                                                             TIGRFAM: maf protein                                                                                                            KEGG: tal:Thal_0504 maf protein                                                                                                                                      COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0614    f       564624     565346     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: conserved Plasmodium protein [Plasmodium falciparum 3D7] gb|AAN35791.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]                                                                                                                              SPTR: Uncharacterized protein PF11_0207;                                                                                                                                                PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: pfa:PF11_0207 conserved Plasmodium protein                                                                                                                     nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0615    f       565343     566059     prodigal   response regulator receiver                                                                                            PFAM          15     nd                nd                                       nd            nd          NR top hit: Pf11-1 protein [Plasmodium falciparum 3D7] gb|AAN35571.2| Pf11-1 protein [Plasmodium falciparum 3D7]                                                                                                                                                          SPTR: Pf11-1 protein;                                                                                                                                                                   PFAM: response regulator receiver                                                                                                                                                                                                                    TIGRFAM:                                                                                                                        KEGG: pfa:PF10_0374 Pf11-1 protein                                                                                                                                   COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains                                                                                          
tam15698  08/20/2010  Contig31    Theam_0616    f       566063     566557     prodigal   2C-methyl-D-erythritol 2;4-cyclodiphosphate synthase                                                                   TIGR          5      nd                nd                                       nd            nd          NR top hit: 2C-methyl-D-erythritol 2;4-cyclodiphosphate synthase [Clostridium hathewayi DSM 13479] gb|EFC94528.1| 2C-methyl-D-erythritol 2;4-cyclodiphosphate synthase [Clostridium hathewayi DSM 13479]                                                                  SPTR: 2-C-methyl-D-erythritol 2;4-cyclodiphosphate synthase;                                                                                                                            PFAM: MECDP-synthase                                                                                                                                                                                                                                 TIGRFAM: 2C-methyl-D-erythritol 2;4-cyclodiphosphate synthase                                                                   KEGG: swo:Swol_2360 2-C-methyl-D-erythritol 2;4-cyclodiphosphate synthase                                                                                            COGs: COG0245 2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0617    f       566551     566988     prodigal   beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ                                                               TIGR          5      nd                nd                                       nd            nd          NR top hit: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ [Geobacter bemidjiensis Bem] gb|ACH37865.1| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ [Geobacter bemidjiensis Bem]                                                                    SPTR: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase;                                                                                                                         PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ                                                                                                                                                                                  TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ                                                               KEGG: gbm:Gbem_0842 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ                                                                                         COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0618    f       566988     567764     prodigal   acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase                                                 TIGR          11     nd                nd                                       nd            nd          NR top hit: acyl-[acyl-carrier- protein]-UDP-N-acetylglucosamine O-acyltransferase [Leptotrichia hofstadii F0254] gb|EEX74823.1| acyl-[acyl-carrier- protein]-UDP-N-acetylglucosamine O-acyltransferase [Leptotrichia hofstadii F0254]                                    SPTR: Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase;                                                                                                            PFAM: transferase hexapeptide repeat containing protein                                                                                                                                                                                              TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase                                                 KEGG: lba:Lebu_1274 UDP-N-acetylglucosamine acyltransferase                                                                                                          COGs: COG1043 Acyl-(acyl carrier protein)                                                                                                                                                       
tam15698  08/20/2010  Contig31    Theam_0619    f       567761     568573     prodigal   metallo-beta-lactamase family protein                                                                                  KEGG          11     nd                nd                                       nd            nd          NR top hit: beta-lactamase domain-containing protein [Dehalogenimonas lykanthroporepellens BL-DC-9] gb|ADJ26623.1| beta-lactamase domain-containing protein [Dehalogenimonas lykanthroporepellens BL-DC-9]                                                                SPTR: Beta-lactamase domain protein;                                                                                                                                                    PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: det:DET1628 metallo-beta-lactamase family protein                                                                                                              COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I                                                                                                                     
tam15698  08/20/2010  Contig31    Theam_0620    f       568573     569115     prodigal   Nucleoside-triphosphatase                                                                                              PRIAM         16     nd                nd                                       nd            nd          NR top hit: protein of unknown function DUF265 [Thermocrinis albus DSM 14484] gb|ADC88800.1| protein of unknown function DUF265 [Thermocrinis albus DSM 14484]                                                                                                            SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function DUF265                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: tal:Thal_0164 protein of unknown function DUF265                                                                                                               COGs: COG1618 nucleotide kinase                                                                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0621    f       569087     570091     prodigal   Hsp33 protein                                                                                                          PFAM          9      nd                nd                                       nd            nd          NR top hit: hypothetical protein aq_2009 [Aquifex aeolicus VF5] sp|O67810.1|HSLO_AQUAE RecName: Full=33 kDa chaperonin; AltName: Full=Heat shock protein 33 homolog; Short=HSP33 gb|AAC07776.1| hypothetical protein aq_2009 [Aquifex aeolicus VF5]                       SPTR: 33 kDa chaperonin;                                                                                                                                                                PFAM: Hsp33 protein                                                                                                                                                                                                                                  TIGRFAM:                                                                                                                        KEGG: aae:aq_2009 hypothetical protein                                                                                                                               COGs: COG1281 Disulfide bond chaperones of the HSP33 family                                                                                                                                     
tam15698  08/20/2010  Contig31    Theam_0622    f       570091     570612     prodigal   peptidase zinc-dependent                                                                                               PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein NIS_0681 [Nitratiruptor sp. SB155-2] dbj|BAF69795.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]                                                                                                                          SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: peptidase zinc-dependent                                                                                                                                                                                                                       TIGRFAM:                                                                                                                        KEGG: nis:NIS_0681 hypothetical protein                                                                                                                              COGs: COG1913 Zn-dependent protease                                                                                                                                                             
tam15698  08/20/2010  Contig31    Theam_0623    f       571985     572806     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: conserved hypothetical protein [Campylobacter rectus RM3267] gb|EEF15041.1| conserved hypothetical protein [Campylobacter rectus RM3267]                                                                                                                      SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: cph:Cpha266_2053 hypothetical protein                                                                                                                          nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0624    r       573578     572793     prodigal   Purine-nucleoside phosphorylase                                                                                        PRIAM         16     nd                nd                                       nd            nd          NR top hit: purine nucleoside phosphorylase [Clostridium ljungdahlii ATCC 49587] gb|ADK15137.1| purine nucleoside phosphorylase [Clostridium ljungdahlii DSM 13528]                                                                                                       SPTR: Inosine guanosine and xanthosine phosphorylase family;                                                                                                                            PFAM: purine or other phosphorylase family 1                                                                                                                                                                                                         TIGRFAM:                                                                                                                        KEGG: clj:CLJU_c20750 purine nucleoside phosphorylase                                                                                                                COGs: COG0005 Purine nucleoside phosphorylase                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0625    r       575260     573581     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: integrin-like repeat-containing protein [Desulfococcus oleovorans Hxd3] gb|ABW65822.1| integrin-like repeat protein [Desulfococcus oleovorans Hxd3]                                                                                                           SPTR: Integrin-like repeat protein;                                                                                                                                                     PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dol:Dole_0012 integrin-like repeat-containing protein                                                                                                          nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0626    f       575360     576583     prodigal   ammonium transporter                                                                                                   PFAM          9      nd                nd                                       nd            nd          NR top hit: Rh family protein/ammonium transporter [Geobacter bemidjiensis Bem] gb|ACH40128.1| Rh family protein/ammonium transporter [Geobacter bemidjiensis Bem]                                                                                                        SPTR: Rh family protein/ammonium transporter;                                                                                                                                           PFAM: ammonium transporter                                                                                                                                                                                                                           TIGRFAM:                                                                                                                        KEGG: gbm:Gbem_3126 Rh family protein/ammonium transporter                                                                                                           COGs: COG0004 Ammonia permease                                                                                                                                                                  
tam15698  08/20/2010  Contig31    Theam_0627    f       576711     577121     prodigal   ferric-uptake regulator                                                                                                PFAM          9      nd                nd                                       nd            nd          NR top hit: transcriptional regulator; Fur family protein [Hydrogenivirga sp. 128-5-R1-1] gb|EDP74022.1| transcriptional regulator; Fur family protein [Hydrogenivirga sp. 128-5-R1-1]                                                                                    SPTR: Transcriptional regulator; Fur family protein;                                                                                                                                    PFAM: ferric-uptake regulator                                                                                                                                                                                                                        TIGRFAM:                                                                                                                        KEGG: saf:SULAZ_0596 transcriptional regulator; Fur family                                                                                                           COGs: COG0735 Fe2+/Zn2+ uptake regulation protein                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0628    f       577249     577587     prodigal   nitrogen regulatory protein P-II                                                                                       PFAM          10     nd                nd                                       nd            nd          NR top hit: nitrogen regulatory protein P-II [Persephonella marina EX-H1] gb|ACO03703.1| nitrogen regulatory protein P-II [Persephonella marina EX-H1]                                                                                                                    SPTR: Nitrogen regulatory protein P-II;                                                                                                                                                 PFAM: nitrogen regulatory protein P-II                                                                                                                                                                                                               TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1585 nitrogen regulatory protein P-II                                                                                                                COGs: COG0347 Nitrogen regulatory protein PII                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0629    f       577603     579021     prodigal   glutamine synthetase; type I                                                                                           TIGR          10     nd                nd                                       nd            nd          NR top hit: glutamine synthetase type I [Deferribacter desulfuricans SSM1] dbj|BAI80934.1| glutamine synthetase; type I [Deferribacter desulfuricans SSM1]                                                                                                                SPTR: Glutamine synthetase;                                                                                                                                                             PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp                                                                                                                                                                         TIGRFAM: glutamine synthetase; type I                                                                                           KEGG: ddf:DEFDS_1474 glutamine synthetase type I                                                                                                                     COGs: COG0174 Glutamine synthetase                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0631    r       580977     579718     prodigal   diaminopimelate decarboxylase                                                                                          TIGR          10     nd                nd                                       nd            nd          NR top hit: diaminopimelate decarboxylase [Desulfonatronospira thiodismutans ASO3-1] gb|EFI36290.1| diaminopimelate decarboxylase [Desulfonatronospira thiodismutans ASO3-1]                                                                                              SPTR: Diaminopimelate decarboxylase;                                                                                                                                                    PFAM: Orn/DAP/Arg decarboxylase 2                                                                                                                                                                                                                    TIGRFAM: diaminopimelate decarboxylase                                                                                          KEGG: tye:THEYE_A1133 diaminopimelate decarboxylase                                                                                                                  COGs: COG0019 Diaminopimelate decarboxylase                                                                                                                                                     
tam15698  08/20/2010  Contig31    Theam_0632    r       583448     580977     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: ATP-dependent nuclease subunit AddB [Clostridium lentocellum DSM 5427] gb|EFG99892.1| ATP-dependent nuclease subunit AddB [Clostridium lentocellum DSM 5427]                                                                                                  SPTR: ATP-dependent nuclease subunit AddB;                                                                                                                                              PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: fpl:Ferp_1592 SMC domain protein                                                                                                                               nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0633    r       584308     583445     prodigal   Prephenate dehydrogenase                                                                                               PFAM          10     nd                nd                                       nd            nd          NR top hit: prephenate dehydrogenase [Hydrogenivirga sp. 128-5-R1-1] gb|EDP75778.1| prephenate dehydrogenase [Hydrogenivirga sp. 128-5-R1-1]                                                                                                                              SPTR: Prephenate dehydrogenase;                                                                                                                                                         PFAM: Prephenate dehydrogenase                                                                                                                                                                                                                       TIGRFAM:                                                                                                                        KEGG: hth:HTH_0664 prephenate dehydrogenase                                                                                                                          COGs: COG0287 Prephenate dehydrogenase                                                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0634    r       584889     584311     prodigal   class II aldolase/adducin family protein                                                                               PFAM          4      nd                nd                                       nd            nd          NR top hit: L-fuculose phosphate aldolase [Pelotomaculum thermopropionicum SI] dbj|BAF59101.1| ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Pelotomaculum thermopropionicum SI]                                                                 SPTR: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases;                                                                                                            PFAM: class II aldolase/adducin family protein                                                                                                                                                                                                       TIGRFAM:                                                                                                                        KEGG: pth:PTH_0920 L-fuculose phosphate aldolase                                                                                                                     COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0635    r       585954     584962     prodigal   histidine kinase HAMP region domain protein                                                                            PFAM          0      nd                nd                                       nd            nd          NR top hit: putative mcp-domain signal transduction protein [Nautilia profundicola AmH] gb|ACM92966.1| putative mcp-domain signal transduction protein [Nautilia profundicola AmH]                                                                                        SPTR: Putative mcp-domain signal transduction protein;                                                                                                                                  PFAM: histidine kinase HAMP region domain protein                                                                                                                                                                                                    TIGRFAM:                                                                                                                        KEGG: nam:NAMH_1443 putative mcp-domain signal transduction protein                                                                                                  nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0636    r       586840     585944     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein HTH_1829 [Hydrogenobacter thermophilus TK-6] dbj|BAI70273.1| hypothetical protein [Hydrogenobacter thermophilus TK-6]                                                                                                                    SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dth:DICTH_1557 hypothetical protein                                                                                                                            nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0638    r       588395     587589     prodigal   protein of unknown function DUF178                                                                                     PFAM          11     nd                nd                                       nd            nd          NR top hit: conserved protein of unknown function [NC10 bacterium 'Dutch sediment']                                                                                                                                                                                       SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function DUF178                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: dsa:Desal_1214 protein of unknown function DUF178                                                                                                              COGs: COG1427 periplasmic solute-binding protein                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0639    r       589318     588389     prodigal   PP-loop domain protein                                                                                                 PFAM          9      nd                nd                                       nd            nd          NR top hit: hypothetical protein aq_1333 [Aquifex aeolicus VF5] gb|AAC07321.1| hypothetical protein aq_1333 [Aquifex aeolicus VF5]                                                                                                                                        SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: PP-loop domain protein                                                                                                                                                                                                                         TIGRFAM:                                                                                                                        KEGG: aae:aq_1333 hypothetical protein                                                                                                                               COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control                                                                                                        
tam15698  08/20/2010  Contig31    Theam_0640    r       590270     589293     prodigal   rfaE bifunctional protein                                                                                              TIGR          9      nd                nd                                       nd            nd          NR top hit: bifunctional protein RfaE; domain I [Leptotrichia goodfellowii F0264] gb|EEY34134.1| bifunctional protein RfaE; domain I [Leptotrichia goodfellowii F0264]                                                                                                    SPTR: Bifunctional protein RfaE; domain I;                                                                                                                                              PFAM: PfkB domain protein                                                                                                                                                                                                                            TIGRFAM: rfaE bifunctional protein                                                                                              KEGG: ddf:DEFDS_0511 ADP-heptose synthase                                                                                                                            COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0641    r       590931     590263     prodigal   DNA repair protein RadC                                                                                                TIGR          2      nd                nd                                       nd            nd          NR top hit: DNA repair protein RadC [Ammonifex degensii KC4] gb|ACX52636.1| DNA repair protein RadC [Ammonifex degensii KC4]                                                                                                                                              SPTR: DNA repair protein RadC;                                                                                                                                                          PFAM: DNA repair protein RadC                                                                                                                                                                                                                        TIGRFAM: DNA repair protein RadC                                                                                                KEGG: adg:Adeg_1541 DNA repair protein RadC                                                                                                                          COGs: COG2003 DNA repair protein                                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0642    r       593728     590918     prodigal   isoleucyl-tRNA synthetase                                                                                              TIGR          7      nd                nd                                       nd            nd          NR top hit: isoleucyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] sp|Q3AEP2.1|SYI_CARHZ RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gb|ABB14741.1| isoleucyl-tRNA synthetase [Carb-TRUNCATED-              SPTR: Isoleucyl-tRNA synthetase;                                                                                                                                                        PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding                                                                                                                                                             TIGRFAM: isoleucyl-tRNA synthetase                                                                                              KEGG: chy:CHY_0534 isoleucyl-tRNA synthetase                                                                                                                         COGs: COG0060 Isoleucyl-tRNA synthetase                                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0643    f       593797     594120     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: alginate biosynthesis protein Alg44 [Caminibacter mediatlanticus TB-2] gb|EDM24595.1| alginate biosynthesis protein Alg44 [Caminibacter mediatlanticus TB-2]                                                                                                  SPTR: Alginate biosynthesis protein Alg44;                                                                                                                                              PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: pdi:BDI_2781 putative glycosyltransferase                                                                                                                      nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0644    r       594521     594123     prodigal   Rhodanese domain protein                                                                                               SMART         11     nd                nd                                       nd            nd          NR top hit: hypothetical protein SUN_1140 [Sulfurovum sp. NBC37-1] dbj|BAF72095.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]                                                                                                                                SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: sun:SUN_1140 hypothetical protein                                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0645    r       596163     594577     prodigal   phosphoglycerate mutase; 2;3-bisphosphoglycerate-independent                                                           TIGR          4      nd                nd                                       nd            nd          NR top hit: phosphoglyceromutase [Pelotomaculum thermopropionicum SI] dbj|BAF60901.1| phosphoglyceromutase [Pelotomaculum thermopropionicum SI]                                                                                                                           SPTR: 2;3-bisphosphoglycerate-independent phosphoglycerate mutase;                                                                                                                      PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein                                                                                                                                                                              TIGRFAM: phosphoglycerate mutase; 2;3-bisphosphoglycerate-independent                                                           KEGG: pth:PTH_2720 phosphoglyceromutase                                                                                                                              COGs: COG0696 Phosphoglyceromutase                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0646    r       596957     596193     prodigal   tRNA pseudouridine synthase A                                                                                          TIGR          7      nd                nd                                       nd            nd          NR top hit: pseudouridylate synthase I [Halothermothrix orenii H 168] ref|YP_002508001.1| pseudouridylate synthase I [Halothermothrix orenii H 168] gb|ACL68911.1| pseudouridylate synthase I [Halothermothrix orenii H 168] gb|ACL69006.1| pseudouridyl-TRUNCATED-       SPTR: Pseudouridylate synthase I;                                                                                                                                                       PFAM: Pseudouridine synthase I; TruA; alpha/beta domain                                                                                                                                                                                              TIGRFAM: tRNA pseudouridine synthase A                                                                                          KEGG: hor:Hore_02450 pseudouridylate synthase I                                                                                                                      COGs: COG0101 Pseudouridylate synthase                                                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0647    f       597009     598151     prodigal   sodium/hydrogen exchanger                                                                                              PFAM          9      nd                nd                                       nd            nd          NR top hit: Kef-type K+ transport system; membrane component [Thermodesulfovibrio yellowstonii DSM 11347] gb|ACI21370.1| Kef-type K+ transport system; membrane component [Thermodesulfovibrio yellowstonii DSM 11347]                                                    SPTR: Kef-type K+ transport system; membrane component;                                                                                                                                 PFAM: sodium/hydrogen exchanger                                                                                                                                                                                                                      TIGRFAM:                                                                                                                        KEGG: tye:THEYE_A1811 Kef-type K+ transport system; membrane component                                                                                               COGs: COG0475 Kef-type K+ transport systems membrane components                                                                                                                                 
tam15698  08/20/2010  Contig31    Theam_0648    f       598173     599234     prodigal   glutamate--cysteine ligase GCS2                                                                                        PFAM          13     nd                nd                                       nd            nd          NR top hit: carboxylate-amine ligase Francci3_0693 [Persephonella marina EX-H1] gb|ACO04439.1| carboxylate-amine ligase Francci3_0693 [Persephonella marina EX-H1]                                                                                                        SPTR: Carboxylate-amine ligase Francci3_0693;                                                                                                                                           PFAM: glutamate--cysteine ligase GCS2                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_0104 carboxylate-amine ligase Francci3_0693                                                                                                          COGs: COG2170 conserved hypothetical protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0649    f       599235     600743     prodigal   gamma-glutamyltransferase                                                                                              TIGR          10     nd                nd                                       nd            nd          NR top hit: gamma-glutamyltransferase [Persephonella marina EX-H1] gb|ACO03706.1| gamma-glutamyltransferase [Persephonella marina EX-H1]                                                                                                                                  SPTR: Gamma-glutamyltransferase;                                                                                                                                                        PFAM: gamma-glutamyltranspeptidase                                                                                                                                                                                                                   TIGRFAM: gamma-glutamyltransferase                                                                                              KEGG: pmx:PERMA_0102 gamma-glutamyltransferase                                                                                                                       COGs: COG0405 Gamma-glutamyltransferase                                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0650    f       600724     601176     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: conserved repeat domain protein [Desulfatibacillum alkenivorans AK-01] gb|ACL05912.1| conserved repeat domain protein [Desulfatibacillum alkenivorans AK-01]                                                                                                  SPTR: Conserved repeat domain protein;                                                                                                                                                  PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dal:Dalk_4230 conserved repeat domain protein                                                                                                                  nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0651    r       603733     601109     prodigal   protein-P-II uridylyltransferase                                                                                       TIGR          9      nd                nd                                       nd            nd          NR top hit: protein-P-II uridylyltransferase [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN98260.1| protein-P-II uridylyltransferase [Sulfurihydrogenibium azorense Az-Fu1]                                                                                                SPTR: Protein-P-II uridylyltransferase;                                                                                                                                                 PFAM: GlnD PII-uridylyltransferase; metal-dependent phosphohydrolase HD sub domain; amino acid-binding ACT domain protein                                                                                                                            TIGRFAM: protein-P-II uridylyltransferase                                                                                       KEGG: saf:SULAZ_1071 protein-P-II uridylyltransferase                                                                                                                COGs: COG2844 UTP:GlnB (protein PII) uridylyltransferase                                                                                                                                        
tam15698  08/20/2010  Contig31    Theam_0652    r       604293     603730     prodigal   phospholipase D/Transphosphatidylase                                                                                   SMART         5      nd                nd                                       nd            nd          NR top hit: putative endonuclease [Hydrogenobacter thermophilus TK-6] dbj|BAI70266.1| putative endonuclease [Hydrogenobacter thermophilus TK-6]                                                                                                                           SPTR: Putative endonuclease;                                                                                                                                                            PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: hth:HTH_1822 putative endonuclease                                                                                                                             COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0653    r       604583     604293     prodigal   preprotein translocase; SecG subunit                                                                                   TIGR          14     nd                nd                                       nd            nd          NR top hit: preprotein translocase; SecG subunit [Spirochaeta smaragdinae DSM 11293]                                                                                                                                                                                      SPTR: Preprotein translocase; SecG subunit;                                                                                                                                             PFAM: Preprotein translocase SecG subunit                                                                                                                                                                                                            TIGRFAM: preprotein translocase; SecG subunit                                                                                   KEGG: afr:AFE_2632 preprotein translocase; SecG subunit                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0654    r       605559     604585     prodigal   UDP-glucose 4-epimerase                                                                                                TIGR          9      nd                nd                                       nd            nd          NR top hit: UDP-glucose 4-epimerase [Persephonella marina EX-H1] gb|ACO04487.1| UDP-glucose 4-epimerase [Persephonella marina EX-H1]                                                                                                                                      SPTR: UDP-glucose 4-epimerase;                                                                                                                                                          PFAM: NAD-dependent epimerase/dehydratase                                                                                                                                                                                                            TIGRFAM: UDP-glucose 4-epimerase                                                                                                KEGG: pmx:PERMA_2007 UDP-glucose 4-epimerase                                                                                                                         COGs: COG1087 UDP-glucose 4-epimerase                                                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0655    r       606328     605582     prodigal   triosephosphate isomerase                                                                                              TIGR          4      nd                nd                                       nd            nd          NR top hit: triosephosphate isomerase [Pelotomaculum thermopropionicum SI] dbj|BAF60902.1| triosephosphate isomerase [Pelotomaculum thermopropionicum SI]                                                                                                                 SPTR: Triosephosphate isomerase;                                                                                                                                                        PFAM: triosephosphate isomerase                                                                                                                                                                                                                      TIGRFAM: triosephosphate isomerase                                                                                              KEGG: pth:PTH_2721 triosephosphate isomerase                                                                                                                         COGs: COG0149 Triosephosphate isomerase                                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0656    r       607572     606340     prodigal   ATP-dependent Clp protease; ATP-binding subunit ClpX                                                                   TIGR          9      nd                nd                                       nd            nd          NR top hit: ATP-dependent Clp protease; ATP-binding subunit ClpX [Thermocrinis albus DSM 14484] gb|ADC89213.1| ATP-dependent Clp protease; ATP-binding subunit ClpX [Thermocrinis albus DSM 14484]                                                                        SPTR: ATP-dependent Clp protease ATP-binding subunit clpX;                                                                                                                              PFAM: ATPase AAA-2 domain protein; Clp ATPase-like                                                                                                                                                                                                   TIGRFAM: ATP-dependent Clp protease; ATP-binding subunit ClpX                                                                   KEGG: tal:Thal_0579 ATP-dependent Clp protease; ATP-binding subunit ClpX                                                                                             COGs: COG1219 ATP-dependent protease Clp ATPase subunit                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0657    f       607715     608347     prodigal   N-(5'phosphoribosyl)anthranilate isomerase (PRAI)                                                                      PFAM          10     nd                nd                                       nd            nd          NR top hit: N-(5'-phosphoribosyl)anthranilate isomerase [Geobacter sulfurreducens PCA] sp|Q74AH7.1|TRPF_GEOSL RecName: Full=N-(5'-phosphoribosyl)anthranilate isomerase; Short=PRAI gb|AAR35751.1| N-(5'phosphoribosyl)anthranilate isomerase [Ge-TRUNCATED-              SPTR: Phosphoribosylanthranilate isomerase;                                                                                                                                             PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI)                                                                                                                                                                                              TIGRFAM:                                                                                                                        KEGG: gsu:GSU2378 N-(5'-phosphoribosyl)anthranilate isomerase                                                                                                        COGs: COG0135 Phosphoribosylanthranilate isomerase                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0658    f       608397     608897     prodigal   Ferritin Dps family protein                                                                                            PFAM          11     nd                nd                                       nd            nd          NR top hit: bacterioferritin [Chlorobium luteolum DSM 273] gb|ABB23465.1| bacterioferritin [Chlorobium luteolum DSM 273]                                                                                                                                                  SPTR: Bacterioferritin;                                                                                                                                                                 PFAM: Ferritin Dps family protein                                                                                                                                                                                                                    TIGRFAM:                                                                                                                        KEGG: plt:Plut_0582 bacterioferritin                                                                                                                                 COGs: COG2406 Protein distantly related to ferritins                                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0660    f       609381     610187     prodigal   lipopolysaccharide biosynthesis protein                                                                                PFAM          11     nd                nd                                       nd            nd          NR top hit: chain length determinant protein [Persephonella marina EX-H1] gb|ACO04553.1| chain length determinant protein [Persephonella marina EX-H1]                                                                                                                    SPTR: Chain length determinant protein;                                                                                                                                                 PFAM: lipopolysaccharide biosynthesis protein                                                                                                                                                                                                        TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_0007 chain length determinant protein                                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0661    r       611974     610184     prodigal   aspartyl-tRNA synthetase                                                                                               TIGR          7      nd                nd                                       nd            nd          NR top hit: aspartyl-tRNA synthetase [Aquifex aeolicus VF5] sp|O67589.1|SYD_AQUAE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gb|AAC07548.1| aspartyl-tRNA synthetase [Aquifex aeolicus VF5]                                SPTR: Aspartyl-tRNA synthetase;                                                                                                                                                         PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein                                                                                                                                      TIGRFAM: aspartyl-tRNA synthetase                                                                                               KEGG: aae:aq_1677 aspartyl-tRNA synthetase                                                                                                                           COGs: COG0173 Aspartyl-tRNA synthetase                                                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0662    r       613543     612011     prodigal   ComEC/Rec2-related protein                                                                                             TIGR          11     nd                nd                                       nd            nd          NR top hit: competence protein [Persephonella marina EX-H1] gb|ACO03501.1| competence protein [Persephonella marina EX-H1]                                                                                                                                                SPTR: Competence protein;                                                                                                                                                               PFAM: ComEC/Rec2-related protein                                                                                                                                                                                                                     TIGRFAM: ComEC/Rec2-related protein                                                                                             KEGG: pmx:PERMA_2021 competence protein                                                                                                                              COGs: COG0658 membrane metal-binding protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0663    f       613596     614375     prodigal   3'(2');5'-bisphosphate nucleotidase                                                                                    TIGR          9      nd                nd                                       nd            nd          NR top hit: CysQ protein [Aquifex aeolicus VF5] gb|AAC06626.1| CysQ protein [Aquifex aeolicus VF5]                                                                                                                                                                        SPTR: CysQ protein;                                                                                                                                                                     PFAM: inositol monophosphatase                                                                                                                                                                                                                       TIGRFAM: 3'(2');5'-bisphosphate nucleotidase                                                                                    KEGG: aae:aq_337 CysQ protein                                                                                                                                        COGs: COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase                                                                                                                       
tam15698  08/20/2010  Contig31    Theam_0664    f       614365     616137     prodigal   TrkA-C domain protein                                                                                                  PFAM          9      nd                nd                                       nd            nd          NR top hit: TrkA-C domain protein [Persephonella marina EX-H1] gb|ACO04643.1| TrkA-C domain protein [Persephonella marina EX-H1]                                                                                                                                          SPTR: TrkA-C domain protein;                                                                                                                                                            PFAM: TrkA-C domain protein; Citrate transporter                                                                                                                                                                                                     TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1988 TrkA-C domain protein                                                                                                                           COGs: COG0471 Di- and tricarboxylate transporter                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0665    f       616138     616746     prodigal   adenylylsulfate kinase                                                                                                 TIGR          9      nd                nd                                       nd            nd          NR top hit: adenylylsulfate kinase [Persephonella marina EX-H1] gb|ACO03782.1| adenylylsulfate kinase [Persephonella marina EX-H1]                                                                                                                                        SPTR: Adenylylsulfate kinase;                                                                                                                                                           PFAM: adenylylsulfate kinase                                                                                                                                                                                                                         TIGRFAM: adenylylsulfate kinase                                                                                                 KEGG: pmx:PERMA_1989 adenylylsulfate kinase                                                                                                                          COGs: COG0529 Adenylylsulfate kinase and related kinase                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0666    f       616759     617913     prodigal   sulfate adenylyltransferase                                                                                            TIGR          9      nd                nd                                       nd            nd          NR top hit: sulfate adenylyltransferase [Persephonella marina EX-H1] sp|C0QSU0.1|SAT_PERMH RecName: Full=Sulfate adenylyltransferase; AltName: Full=Sulfate adenylate transferase; Short=SAT; AltName: Full=ATP-sulfurylase gb|ACO03816.1| sul-TRUNCATED-                 SPTR: Sulfate adenylyltransferase;                                                                                                                                                      PFAM: ATP-sulfurylase                                                                                                                                                                                                                                TIGRFAM: sulfate adenylyltransferase                                                                                            KEGG: pmx:PERMA_1983 sulfate adenylyltransferase                                                                                                                     COGs: COG2046 ATP sulfurylase (sulfate adenylyltransferase)                                                                                                                                     
tam15698  08/20/2010  Contig31    Theam_0667    f       618002     619210     prodigal   polysaccharide biosynthesis protein                                                                                    PFAM          11     nd                nd                                       nd            nd          NR top hit: hypothetical protein [Candidatus Kuenenia stuttgartiensis]                                                                                                                                                                                                    SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: polysaccharide biosynthesis protein                                                                                                                                                                                                            TIGRFAM:                                                                                                                        KEGG: dol:Dole_1836 polysaccharide biosynthesis protein                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0668    f       619224     620060     prodigal   sulfotransferase                                                                                                       PFAM          11     nd                nd                                       nd            nd          NR top hit: sulfotransferase [Methanocaldococcus infernus ME] gb|ADG12893.1| sulfotransferase [Methanocaldococcus infernus ME]                                                                                                                                            SPTR: Sulfotransferase;                                                                                                                                                                 PFAM: sulfotransferase                                                                                                                                                                                                                               TIGRFAM:                                                                                                                        KEGG: mif:Metin_0222 sulfotransferase                                                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0669    f       620073     620945     prodigal   glycosyl transferase family 2                                                                                          PFAM          11     nd                nd                                       nd            nd          NR top hit: Glycosyltransferase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gb|ACE62129.1| Glycosyltransferase [Actinobacillus pleuropneumoniae serovar 7 str. AP76]                                                                                            SPTR: Glycosyltransferase;                                                                                                                                                              PFAM: glycosyl transferase family 2                                                                                                                                                                                                                  TIGRFAM:                                                                                                                        KEGG: apa:APP7_1477 glycosyltransferase                                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0670    f       620920     622185     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: membrane protein; putative [Thalassiobium sp. R2A62] gb|EET49569.1| membrane protein; putative [Thalassiobium sp. R2A62]                                                                                                                                      SPTR: Membrane protein; putative;                                                                                                                                                       PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: bam:Bamb_3623 hypothetical protein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0671    f       622163     623212     prodigal   glycosyl transferase group 1                                                                                           PFAM          9      nd                nd                                       nd            nd          NR top hit: glycosyl transferase; group 1 family protein [Chlorobium luteolum DSM 273] gb|ABB23647.1| glycosyl transferase; group 1 family protein [Chlorobium luteolum DSM 273]                                                                                          SPTR: Glycosyl transferase; group 1 family protein;                                                                                                                                     PFAM: glycosyl transferase group 1                                                                                                                                                                                                                   TIGRFAM:                                                                                                                        KEGG: plt:Plut_0774 glycosyl transferase; group 1 family protein                                                                                                     COGs: COG0438 Glycosyltransferase                                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0672    f       623237     623398     prodigal   hypothetical protein                                                                                                   hypothetical  13     nd                nd                                       nd            nd          nd                                                                                                                                                                                                                                                                        nd                                                                                                                                                                                      PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        nd                                                                                                                                                                   nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0674    f       623797     624909     prodigal   glycosyl transferase group 1                                                                                           PFAM          9      nd                nd                                       nd            nd          NR top hit: glycosyl transferase; group 1 [Persephonella marina EX-H1] gb|ACO04881.1| glycosyl transferase; group 1 [Persephonella marina EX-H1]                                                                                                                          SPTR: Glycosyl transferase; group 1;                                                                                                                                                    PFAM: glycosyl transferase group 1                                                                                                                                                                                                                   TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_2003 glycosyl transferase; group 1                                                                                                                   COGs: COG0438 Glycosyltransferase                                                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0675    f       624921     625547     prodigal   Undecaprenyl-phosphate galactose phosphotransferase                                                                    PRIAM         9      nd                nd                                       nd            nd          NR top hit: probable exopolysaccharide production protein [Caminibacter mediatlanticus TB-2] gb|EDM23171.1| probable exopolysaccharide production protein [Caminibacter mediatlanticus TB-2]                                                                              SPTR: Probable exopolysaccharide production protein;                                                                                                                                    PFAM: sugar transferase                                                                                                                                                                                                                              TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_2008 putative undecaprenyl-phosphate galactosephosphotransferase                                                                                     COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis                                                                                                                        
tam15698  08/20/2010  Contig31    Theam_0676    f       625620     626009     prodigal   S-adenosylmethionine decarboxylase proenzyme                                                                           TIGR          10     nd                nd                                       nd            nd          NR top hit: S-adenosylmethionine decarboxylase proenzyme [Aquifex aeolicus VF5] sp|O66615.1|SPEH_AQUAE RecName: Full=S-adenosylmethionine decarboxylase proenzyme; Short=AdoMetDC; Short=SAMDC; Contains: RecName: Full=S-adenosylmethionine deca-TRUNCATED-              SPTR: S-adenosylmethionine decarboxylase proenzyme;                                                                                                                                     PFAM: S-adenosylmethionine decarboxylase related                                                                                                                                                                                                     TIGRFAM: S-adenosylmethionine decarboxylase proenzyme                                                                           KEGG: aae:aq_254 S-adenosylmethionine decarboxylase proenzyme                                                                                                        COGs: COG1586 S-adenosylmethionine decarboxylase                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0677    r       626509     626126     prodigal   RNA polymerase-binding protein DksA                                                                                    KEGG          15     nd                nd                                       nd            nd          NR top hit: RNA polymerase-binding protein DksA [Thermodesulfovibrio yellowstonii DSM 11347] gb|ACI20338.1| RNA polymerase-binding protein DksA [Thermodesulfovibrio yellowstonii DSM 11347]                                                                              SPTR: RNA polymerase-binding protein DksA;                                                                                                                                              PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: tye:THEYE_A0802 RNA polymerase-binding protein DksA                                                                                                            COGs: COG1734 DnaK suppressor protein                                                                                                                                                           
tam15698  08/20/2010  Contig31    Theam_0678    f       626588     627775     prodigal   aminotransferase class I and II                                                                                        PFAM          10     nd                nd                                       nd            nd          NR top hit: aspartate aminotransferase [Aquifex aeolicus VF5] sp|O67781.1|AAT_AQUAE RecName: Full=Aspartate aminotransferase; Short=AspAT; AltName: Full=Transaminase A gb|AAC07746.1| aspartate aminotransferase [Aquifex aeolicus VF5]                                  SPTR: Aspartate aminotransferase;                                                                                                                                                       PFAM: aminotransferase class I and II                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: aae:aq_1969 aspartate aminotransferase                                                                                                                         COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase                                                                                                                                      
tam15698  08/20/2010  Contig31    Theam_0679    f       627768     628283     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gb|EDY59565.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]                                                                                                              SPTR: Hypothetical membrane protein;                                                                                                                                                    PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: sat:SYN_02925 hypothetical protein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0680    r       628798     628277     prodigal   DNA-directed RNA polymerase; omega subunit family protein                                                              KEGG          11     nd                nd                                       nd            nd          NR top hit: DNA-directed RNA polymerase; omega subunit family protein [Tetrahymena thermophila] gb|EAR94460.1| DNA-directed RNA polymerase; omega subunit family protein [Tetrahymena thermophila SB210]                                                                  SPTR: DNA-directed RNA polymerase; omega subunit family protein;                                                                                                                        PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: tet:TTHERM_00047130 DNA-directed RNA polymerase; omega subunit family protein                                                                                  nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0681    f       628881     629447     prodigal   regulatory protein TetR                                                                                                PFAM          6      nd                nd                                       nd            nd          NR top hit: transcriptional regulator (TetR/AcrR family) protein [Hydrogenivirga sp. 128-5-R1-1] gb|EDP75472.1| transcriptional regulator (TetR/AcrR family) protein [Hydrogenivirga sp. 128-5-R1-1]                                                                      SPTR: Transcriptional regulator (TetR/AcrR family) protein;                                                                                                                             PFAM: regulatory protein TetR                                                                                                                                                                                                                        TIGRFAM:                                                                                                                        KEGG: aae:aq_281 TetR/AcrR family transcriptional regulator                                                                                                          COGs: COG1309 Transcriptional regulator                                                                                                                                                         
tam15698  08/20/2010  Contig31    Theam_0682    f       629444     632647     prodigal   CoA-substrate-specific enzyme activase                                                                                 TIGR          5      nd                nd                                       nd            nd          NR top hit: putative CoA-substrate-specific enzyme activase [Solibacter usitatus Ellin6076] gb|ABJ81921.1| putative CoA-substrate-specific enzyme activase [Candidatus Solibacter usitatus Ellin6076]                                                                     SPTR: Putative CoA-substrate-specific enzyme activase;                                                                                                                                  PFAM: Protein of unknown function DUF2229; CoA enzyme activase; ATPase BadF/BadG/BcrA/BcrD type                                                                                                                                                      TIGRFAM: CoA-substrate-specific enzyme activase                                                                                 KEGG: sus:Acid_0922 putative CoA-substrate-specific enzyme activase                                                                                                  COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)                                                                                                        
tam15698  08/20/2010  Contig31    Theam_0683    f       632755     634722     prodigal   EAL domain protein                                                                                                     PFAM          15     nd                nd                                       nd            nd          NR top hit: eal/pas/ggdef domain protein [Persephonella marina EX-H1] gb|ACO04386.1| eal/pas/ggdef domain protein [Persephonella marina EX-H1]                                                                                                                            SPTR: Eal/pas/ggdef domain protein;                                                                                                                                                     PFAM: EAL domain protein                                                                                                                                                                                                                             TIGRFAM:                                                                                                                        KEGG: pmx:PERMA_1004 eal/PAS/GGDEF domain protein                                                                                                                    COGs: COG2200 FOG: EAL domain                                                                                                                                                                   
tam15698  08/20/2010  Contig31    Theam_0684    f       634756     636414     prodigal   carbon starvation protein CstA                                                                                         PFAM          15     nd                nd                                       nd            nd          NR top hit: carbon starvation-induced protein [Coprothermobacter proteolyticus DSM 5265] gb|ACI17909.1| carbon starvation-induced protein [Coprothermobacter proteolyticus DSM 5265]                                                                                      SPTR: Carbon starvation-induced protein;                                                                                                                                                PFAM: carbon starvation protein CstA                                                                                                                                                                                                                 TIGRFAM:                                                                                                                        KEGG: cpo:COPRO5265_1025 carbon starvation-induced protein                                                                                                           COGs: COG1966 Carbon starvation protein predicted membrane protein                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0685    f       636427     636774     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein NAMH_1795 [Nautilia profundicola AmH] gb|ACM93225.1| conserved hypothetical protein [Nautilia profundicola AmH]                                                                                                                          SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: nam:NAMH_1795 hypothetical protein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0686    f       636771     637751     prodigal   NAD-dependent glycerol-3-phosphate dehydrogenase domain protein                                                        PFAM          3      nd                nd                                       nd            nd          NR top hit: glycerol-3-phosphate dehydrogenase (NAD(P)(+)) [Desulfovibrio vulgaris subsp. vulgaris DP4] sp|A1V9Y4.1|GPDA_DESVV RecName: Full=Glycerol-3-phosphate dehydrogenase [NAD(P)+]; AltName: Full=NAD(P)H-dependent glycerol-3-phosphate -TRUNCATED-               SPTR: Glycerol-3-phosphate dehydrogenase [NAD(P)+];                                                                                                                                     PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: dvl:Dvul_0226 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase                                                                                             COGs: COG0240 Glycerol-3-phosphate dehydrogenase                                                                                                                                                
tam15698  08/20/2010  Contig31    Theam_0687    f       637748     638212     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein LOC100145245 [Xenopus (Silurana) tropicalis] gb|AAI59325.1| LOC100145245 protein [Xenopus (Silurana) tropicalis]                                                                                                                         SPTR: LOC100145245 protein;                                                                                                                                                             PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: xtr:100145245 family with sequence similarity 129; member B                                                                                                    nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0688    f       638205     638912     prodigal   phosphate transport system regulatory protein PhoU                                                                     TIGR          9      nd                nd                                       nd            nd          NR top hit: Chain A; Crystal Structure Of Refolded Phou-Like Protein (Gi 2983430) From Aquifex Aeolicus pdb|1T8B|B Chain B; Crystal Structure Of Refolded Phou-Like Protein (Gi 2983430) From Aquifex Aeolicus                                                            SPTR: Phosphate transport system protein phoU homolog;                                                                                                                                  PFAM: PhoU family protein                                                                                                                                                                                                                            TIGRFAM: phosphate transport system regulatory protein PhoU                                                                     KEGG: aae:aq_906 transcriptional regulator (PhoU-like)                                                                                                               COGs: COG0704 Phosphate uptake regulator                                                                                                                                                        
tam15698  08/20/2010  Contig31    Theam_0689    f       638917     639729     prodigal   ABC-3 protein                                                                                                          PFAM          9      nd                nd                                       nd            nd          NR top hit: manganese transport system permease [Candidatus Nitrospira defluvii] emb|CBK40161.1| Manganese transport system; permease component [Candidatus Nitrospira defluvii]                                                                                          SPTR: ABC-3 protein;                                                                                                                                                                    PFAM: ABC-3 protein                                                                                                                                                                                                                                  TIGRFAM:                                                                                                                        KEGG: nde:NIDE0383 manganese transport system permease                                                                                                               COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components                                                                                                                          
tam15698  08/20/2010  Contig31    Theam_0690    r       640419     639673     prodigal   protein of unknown function DUF72                                                                                      PFAM          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein NAMH_0940 [Nautilia profundicola AmH] gb|ACM93157.1| conserved hypothetical protein [Nautilia profundicola AmH]                                                                                                                          SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: protein of unknown function DUF72                                                                                                                                                                                                              TIGRFAM:                                                                                                                        KEGG: nam:NAMH_0940 hypothetical protein                                                                                                                             COGs: COG1801 conserved hypothetical protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0691    r       641000     640416     prodigal   NADPH-dependent FMN reductase                                                                                          PFAM          11     nd                nd                                       nd            nd          NR top hit: NADPH-dependent FMN reductase [Methanocaldococcus sp. FS406-22] gb|ADC68872.1| NADPH-dependent FMN reductase [Methanocaldococcus sp. FS406-22]                                                                                                                SPTR: NADPH-dependent FMN reductase;                                                                                                                                                    PFAM: NADPH-dependent FMN reductase                                                                                                                                                                                                                  TIGRFAM:                                                                                                                        KEGG: mfs:MFS40622_0174 NADPH-dependent FMN reductase                                                                                                                COGs: COG0655 Multimeric flavodoxin WrbA                                                                                                                                                        
tam15698  08/20/2010  Contig31    Theam_0692    r       642448     641009     prodigal   ribosome-associated GTPase EngA                                                                                        TIGR          11     nd                nd                                       nd            nd          NR top hit: GTP-binding protein EngA [Sulfurihydrogenibium azorense Az-Fu1] gb|ACN99588.1| ribosome-associated GTPase EngA [Sulfurihydrogenibium azorense Az-Fu1]                                                                                                         SPTR: GTP-binding protein engA;                                                                                                                                                         PFAM: GTP-binding protein HSR1-related                                                                                                                                                                                                               TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein                                                             KEGG: saf:SULAZ_0814 GTP-binding protein EngA                                                                                                                        COGs: COG1160 GTPase                                                                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0693    r       643068     642445     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: PP-loop domain-containing protein [Pyrobaculum calidifontis JCM 11548] gb|ABO09064.1| PP-loop domain protein [Pyrobaculum calidifontis JCM 11548]                                                                                                             SPTR: PP-loop domain protein;                                                                                                                                                           PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: pcl:Pcal_1647 PP-loop domain-containing protein                                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0694    r       643755     643171     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein aq_757 [Aquifex aeolicus VF5] sp|O66959.1|Y757_AQUAE RecName: Full=Uncharacterized protein aq_757 gb|AAC06924.1| putative protein [Aquifex aeolicus VF5]                                                                                 SPTR: Uncharacterized protein aq_757;                                                                                                                                                   PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: aae:aq_757 hypothetical protein                                                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0695    r       644270     643755     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein aq_758 [Aquifex aeolicus VF5] sp|O66960.1|Y758_AQUAE RecName: Full=Uncharacterized protein aq_758 gb|AAC06925.1| putative protein [Aquifex aeolicus VF5]                                                                                 SPTR: Uncharacterized protein aq_758;                                                                                                                                                   PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: aae:aq_758 hypothetical protein                                                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0696    r       644530     644372     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein MJ_0647 [Methanocaldococcus jannaschii DSM 2661] sp|Q58063.3|Y647_METJA RecName: Full=Uncharacterized protein MJ0647 gb|AAB98645.1| hypothetical protein MJ_0647 [Methanocaldococcus jannaschii DSM 2661]                                SPTR: Uncharacterized protein MJ0647;                                                                                                                                                   PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: hypothetical protein                                                                                                                                           nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0697    r       644969     644508     prodigal   prefoldin; alpha subunit                                                                                               TIGR          9      nd                nd                                       nd            nd          NR top hit: prefoldin subunit alpha [Aquifex aeolicus VF5] sp|O66961.1|PFDA_AQUAE RecName: Full=Putative prefoldin subunit alpha gb|AAC06929.1| hypothetical protein aq_759 [Aquifex aeolicus VF5]                                                                        SPTR: Putative prefoldin subunit alpha;                                                                                                                                                 PFAM: Prefoldin alpha domain protein                                                                                                                                                                                                                 TIGRFAM: prefoldin; alpha subunit                                                                                               KEGG: aae:aq_759 prefoldin subunit alpha                                                                                                                             COGs: COG1730 prefoldin molecular chaperone implicated in de novo protein folding                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0698    r       645718     644999     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein CMTB2_08327 [Caminibacter mediatlanticus TB-2] gb|EDM23527.1| hypothetical protein CMTB2_08327 [Caminibacter mediatlanticus TB-2]                                                                                                        SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: aae:aq_755 hypothetical protein                                                                                                                                nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0699    r       646422     645730     prodigal   Uncharacterised protein family UPF0128                                                                                 PFAM          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein NAMH_0411 [Nautilia profundicola AmH] gb|ACM92286.1| conserved hypothetical protein [Nautilia profundicola AmH]                                                                                                                          SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: Uncharacterised protein family UPF0128                                                                                                                                                                                                         TIGRFAM:                                                                                                                        KEGG: nam:NAMH_0411 hypothetical protein                                                                                                                             COGs: COG1851 conserved hypothetical protein                                                                                                                                                    
tam15698  08/20/2010  Contig31    Theam_0700    f       646575     647981     prodigal   SagB-type dehydrogenase domain                                                                                         TIGR          11     nd                nd                                       nd            nd          NR top hit: conserved protein of unknown function [NC10 bacterium 'Dutch sediment']                                                                                                                                                                                       SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM: nitroreductase                                                                                                                                                                                                                                 TIGRFAM: SagB-type dehydrogenase domain                                                                                         KEGG: dol:Dole_2124 hypothetical protein                                                                                                                             nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0701    f       648086     649204     prodigal   lysine 2;3-aminomutase YodO family protein                                                                             TIGR          10     nd                nd                                       nd            nd          NR top hit: lysine 2;3-aminomutase YodO family protein [Archaeoglobus profundus DSM 5631] gb|ADB58092.1| lysine 2;3-aminomutase YodO family protein [Archaeoglobus profundus DSM 5631]                                                                                    SPTR: Lysine 2;3-aminomutase YodO family protein;                                                                                                                                       PFAM: Radical SAM domain protein                                                                                                                                                                                                                     TIGRFAM: lysine 2;3-aminomutase YodO family protein                                                                             KEGG: apo:Arcpr_1032 lysine 2;3-aminomutase YodO family protein                                                                                                      COGs: COG1509 Lysine 2 3-aminomutase                                                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0702    r       649594     649169     prodigal   2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase                                                    TIGR          12     nd                nd                                       nd            nd          NR top hit: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase [Thermoanaerobacter italicus Ab9] ref|YP_003677687.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase [Thermoanaerobacter mathranii subsp.-TRUNCATED-                 SPTR: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;                                                                                                              PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK                                                                                                                                                                                        TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase                                                    KEGG: tmt:Tmath_1994 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase                                                                             COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase                                                                                                                               
tam15698  08/20/2010  Contig31    Theam_0704    f       650156     651265     prodigal   histidinol-phosphate aminotransferase                                                                                  TIGR          10     nd                nd                                       nd            nd          NR top hit: histidinol phosphate aminotransferase [Moorella thermoacetica ATCC 39073] sp|Q2RL44.1|HIS8_MOOTA RecName: Full=Histidinol-phosphate aminotransferase; AltName: Full=Imidazole acetol-phosphate transaminase gb|ABC18845.1| histidinol-TRUNCATED-              SPTR: Histidinol-phosphate aminotransferase;                                                                                                                                            PFAM: aminotransferase class I and II                                                                                                                                                                                                                TIGRFAM: histidinol-phosphate aminotransferase                                                                                  KEGG: mta:Moth_0515 histidinol phosphate aminotransferase                                                                                                            COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase                                                                                                     
tam15698  08/20/2010  Contig31    Theam_0705    f       651265     651555     prodigal   hypothetical protein                                                                                                   KEGG          13     nd                nd                                       nd            nd          NR top hit: hypothetical protein [uncultured prokaryote AT3]                                                                                                                                                                                                              SPTR: Putative uncharacterized protein;                                                                                                                                                 PFAM:                                                                                                                                                                                                                                                TIGRFAM:                                                                                                                        KEGG: nis:NIS_1239 hypothetical protein                                                                                                                              nd                                                                                                                                                                                              
tam15698  08/20/2010  Contig31    Theam_0706    f       651564     652715     prodigal   metallophosphoesterase                                                                                                 PFAM          2      nd                nd                                       nd            nd          NR top hit: hypothetical protein METSMIALI_00253 [Methanobrevibacter smithii DSM 2375] gb|EEE41371.1| hypothetical protein METSMIALI_00253 [Methanobrevibacter smithii DSM 2375]                                                                                          SPTR: DNA repair exonuclease (SbcD/Mre11-family); Rad32;                                                                                                                                PFAM: metallophosphoesterase                                                                                                                                                                                                                         TIGRFAM:                                                                                                                        KEGG: msi:Msm_0121 DNA repair exonuclease Rad32                                                                                                                      COGs: COG0420 DNA repair exonuclease                                                                                                                                                            
tam15698  08/20/2010  Contig31    Theam_0707    f       652709     653419     prodigal   phosphoribosyltransferase                                                                                              PFAM          11     nd                nd                                       nd            nd          NR top hit: phosphoribosyltransferase [Geobacter metallireducens GS-15] gb|ABB33546.1| Phosphoribosyltransferase [Geobacter metallireducens GS-15]                                                                                                                        SPTR: Phosphoribosyltransferase;